CF509801

Overview
NameCF509801
Unique NameCF509801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length426
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_CRYPV (Elongation factor 2 OS=Cryptosporidium parvum PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 9.207e-49
Identity = 88/139 (63.31%), Postives = 111/139 (79.86%), Query Frame = 2
Query:    5 MKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETV 421
            +K ++K L+ K L+K+VMQ WL A   LLEM++ HLPSP+ AQKYRVENLYEGP DD+ A  IRNCDP+ PL ++VSKM+P SDKGRF+AFGRVFSG V+TG KVRI GP YVPG K+DL +K++QRTV+ MG+  E +
Sbjct:  297 LKGDDKALVDKPLLKKVMQLWLSAGDTLLEMIVTHLPSPAAAQKYRVENLYEGPQDDETAKGIRNCDPDAPLCMFVSKMVPTSDKGRFYAFGRVFSGTVATGQKVRIQGPRYVPGGKEDLNIKNIQRTVLMMGRYVEQI 435          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_YEAST (Elongation factor 2 OS=Saccharomyces cerevisiae GN=EFT1 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 2.051e-48
Identity = 89/140 (63.57%), Postives = 111/140 (79.29%), Query Frame = 2
Query:    5 MKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVE 424
            +K +EKDL GKAL+K VM+ +LPA+ ALLEM++ HLPSP TAQ YR E LYEGP DD    AI+NCDP   LMLYVSKM+P SDKGRF+AFGRVF+G V +G KVRI GPNYVPG+K DL++K++QR V+ MG+  E ++
Sbjct:  307 LKGDEKDLEGKALLKVVMRKFLPAADALLEMIVLHLPSPVTAQAYRAEQLYEGPADDANCIAIKNCDPKADLMLYVSKMVPTSDKGRFYAFGRVFAGTVKSGQKVRIQGPNYVPGKKDDLFIKAIQRVVLMMGRFVEPID 446          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_SACKL (Elongation factor 2 OS=Saccharomyces kluyveri GN=EFT2 PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 2.051e-48
Identity = 90/140 (64.29%), Postives = 111/140 (79.29%), Query Frame = 2
Query:    5 MKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVE 424
            +K EEK+L GKAL+K VM+ +LPA+ ALLEM+I HLPSP TAQ YR E LYEGP DD    AI+NCDP   LMLYVSKM+P SDKGRF+AFGRVF+G V +G KVRI GPNY+PG+K DL++K+VQR V+ MG+  E ++
Sbjct:  307 LKGEEKELEGKALLKIVMRKFLPAADALLEMIIMHLPSPVTAQNYRAEQLYEGPSDDPACIAIKNCDPKADLMLYVSKMVPTSDKGRFYAFGRVFAGTVKSGQKVRIQGPNYIPGKKDDLFIKAVQRAVLMMGRFVEPID 446          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_CANGA (Elongation factor 2 OS=Candida glabrata GN=EFT1 PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 2.051e-48
Identity = 89/140 (63.57%), Postives = 111/140 (79.29%), Query Frame = 2
Query:    5 MKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVE 424
            +KS+EKDL GKAL+K VM+ +LPA+ ALLEM++ HLPSP TAQ YR E LYEGP DD    AI+ CDP   LMLYVSKM+P SDKGRF+AFGRVF+G V +G K+RI GPNYVPG+K DL++K+VQR V+ MG + E ++
Sbjct:  307 LKSDEKDLEGKALLKVVMRKFLPAADALLEMIVMHLPSPVTAQNYRAEQLYEGPADDANCIAIKKCDPTADLMLYVSKMVPTSDKGRFYAFGRVFAGTVKSGQKIRIQGPNYVPGKKDDLFLKAVQRVVLMMGSRVEPID 446          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_KLULA (Elongation factor 2 OS=Kluyveromyces lactis GN=EFT1 PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 5.052e-47
Identity = 86/140 (61.43%), Postives = 111/140 (79.29%), Query Frame = 2
Query:    5 MKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVE 424
            +K +EK+L GK L+K VM+ +LPA+ ALLEM+I HLPSP TAQ YR E LYEGP DD    AI+NCDP   LMLYVSKM+P SDKGRF+AFGRVF+G V +G KVRI GPN++PG+K+DL++K++QR V+ MG+  E ++
Sbjct:  307 LKGDEKELEGKNLLKVVMRKFLPAADALLEMIILHLPSPVTAQNYRAEQLYEGPSDDPACIAIKNCDPKSDLMLYVSKMVPTSDKGRFYAFGRVFAGTVKSGQKVRIQGPNFIPGKKEDLFIKAIQRAVLMMGRFVEPID 446          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_DEBHA (Elongation factor 2 OS=Debaryomyces hansenii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 5.052e-47
Identity = 87/140 (62.14%), Postives = 111/140 (79.29%), Query Frame = 2
Query:    5 MKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVE 424
            +K+EEK+L GKAL+K VM+ +LPA+ ALLEM++ HLPSP TAQ YR E LYEGP DD    AI+NCDP   LM+Y+SKM+P SDKGRF+AFGRVF+G V +G KVRI GPNY  G+K DL+VK++QRTV+ MG+  E ++
Sbjct:  307 LKAEEKELEGKALLKVVMRKFLPAADALLEMIVIHLPSPVTAQAYRAETLYEGPADDASCIAIKNCDPTADLMVYISKMVPTSDKGRFYAFGRVFAGTVKSGQKVRIQGPNYQVGKKDDLFVKAIQRTVLMMGRFVEAID 446          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_ASHGO (Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.125e-46
Identity = 87/140 (62.14%), Postives = 111/140 (79.29%), Query Frame = 2
Query:    5 MKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVE 424
            +KS+E+DL GKAL+K VM+ +LPA+ ALLEM+I HLPSP TAQ YR E LYEGP DD    AI+NCDP   LMLYVSKM+P SDKGRF+AFGRVFSG V +G KVRI GP++  G+K+DL++K++QR V+ MG+  E ++
Sbjct:  307 LKSDERDLEGKALLKVVMRKFLPAADALLEMIIMHLPSPVTAQNYRAEQLYEGPSDDPACIAIKNCDPKADLMLYVSKMVPTSDKGRFYAFGRVFSGTVKSGQKVRIQGPSFTVGKKEDLFIKAIQRAVLMMGRFVEPID 446          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_SACCA (Elongation factor 2 OS=Saccharomyces castellii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.470e-46
Identity = 87/140 (62.14%), Postives = 109/140 (77.86%), Query Frame = 2
Query:    5 MKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVE 424
            +K +EKD  GKAL+K VM+ +LPA+ ALLEM++ +LPSP TAQ YR E LYEGP DD    AI+ CDP   LMLYVSKM+P SDKGRF+AFGRVF+G V +G KVRI GPNYVPG+K DL+VK++QR V+ MG+  E ++
Sbjct:  307 LKGDEKDQEGKALLKTVMKKFLPAADALLEMIVMNLPSPVTAQAYRAEQLYEGPADDANCMAIKRCDPKADLMLYVSKMVPTSDKGRFYAFGRVFAGTVRSGQKVRIQGPNYVPGKKDDLFVKAIQRVVLMMGRFVEPID 446          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_ENTHI (Elongation factor 2 OS=Entamoeba histolytica GN=EF-2 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 7.295e-46
Identity = 81/140 (57.86%), Postives = 107/140 (76.43%), Query Frame = 2
Query:    5 MKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVE 424
            + +++K+  GK L+K VM+ WLPA   LLEM++ HLPSP  AQKYR  NLY GP+DD+ A A+ NCD  GPLM+YVSKMIP +DKGRF+AFGRVFSG + TG K RI GPNYVPG+K D  +K++QRT++ MG+  + ++
Sbjct:  305 LSADDKEKEGKELLKTVMKLWLPAGVTLLEMIVLHLPSPVVAQKYRTSNLYTGPMDDEAAKAMANCDEKGPLMMYVSKMIPTNDKGRFYAFGRVFSGTIRTGGKARICGPNYVPGKKDDCVIKNIQRTMLMMGRYTDPID 444          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_BLAHO (Elongation factor 2 OS=Blastocystis hominis PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 2.123e-45
Identity = 87/140 (62.14%), Postives = 106/140 (75.71%), Query Frame = 2
Query:    2 TMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETV 421
            T+ SEEKDL  KAL+KRVM  WLPA+ ALLEM++ HLPSP  AQKYR   LY+GP DD+   A++ CDPNG LM+YVSKM+P +D+ RF+AFGRVFSG + +G KVRI+GP Y    K DL +KSVQRTVI MG+  E V
Sbjct:  328 TLTSEEKDLRDKALVKRVMSKWLPAADALLEMIVLHLPSPVDAQKYRAPLLYDGPEDDEACTAMKKCDPNGCLMMYVSKMVPTADQSRFYAFGRVFSGIIRSGQKVRILGPKYSATNKSDLLIKSVQRTVIMMGRYVEQV 467          
The following BLAST results are available for this feature:
BLAST of CF509801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
EF2_CRYPV9.207e-4963.31Elongation factor 2 OS=Cryptosporidium parvum PE=3... [more]
EF2_YEAST2.051e-4863.57Elongation factor 2 OS=Saccharomyces cerevisiae GN... [more]
EF2_SACKL2.051e-4864.29Elongation factor 2 OS=Saccharomyces kluyveri GN=E... [more]
EF2_CANGA2.051e-4863.57Elongation factor 2 OS=Candida glabrata GN=EFT1 PE... [more]
EF2_KLULA5.052e-4761.43Elongation factor 2 OS=Kluyveromyces lactis GN=EFT... [more]
EF2_DEBHA5.052e-4762.14Elongation factor 2 OS=Debaryomyces hansenii GN=EF... [more]
EF2_ASHGO1.125e-4662.14Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=... [more]
EF2_SACCA1.470e-4662.14Elongation factor 2 OS=Saccharomyces castellii GN=... [more]
EF2_ENTHI7.295e-4657.86Elongation factor 2 OS=Entamoeba histolytica GN=EF... [more]
EF2_BLAHO2.123e-4562.14Elongation factor 2 OS=Blastocystis hominis PE=2 S... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-309 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-81_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509801 ID=CF509801; Name=CF509801; organism=Citrus sinensis; type=EST; length=426bp
CACGATGAAGTCAGAAGAGAAGGATTTGATGGGCAAGGCATTGATGAAGC
GTGTCATGCAGACCTGGCTTCCTGCAAGTAGTGCACTTTTGGAAATGATG
ATCTTTCACCTTCCCTCTCCTTCCACGGCCCAAAAATATCGTGTTGAGAA
CTTGTATGAGGGTCCTCTTGATGATCAATATGCTAATGCTATTCGGAACT
GTGATCCTAATGGTCCTCTTATGCTCTATGTATCTAAGATGATTCCTGCA
TCTGATAAGGGTAGGTTCTTTGCTTTCGGTCGTGTGTTTTCTGGTAAGGT
GTCAACAGGTTTGAAGGTCAGGATCATGGGTCCAAACTATGTTCCTGGTG
AGAAGAAAGATTTGTATGTTAAGAGCGTCCAAAGGACTGTTATTTGGATG
GGAAAGAAGCAGGAAACCGTTGAGGA
back to top