CF509801

Overview
NameCF509801
Unique NameCF509801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length426
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_PYRIL (Elongation factor 2 OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=fusA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.093e-12
Identity = 42/111 (37.84%), Postives = 59/111 (53.15%), Query Frame = 2
Query:   71 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMG 403
            P    LL M+I H+P P+ AQKYR+  L+ G L+ +   A+   DPNGP ++ VSK+      G     GRVFSG +  G ++      Y+ G K     K V +T I+MG
Sbjct:  247 PLYKTLLSMIIEHVPPPNVAQKYRIPRLWRGDLNSEVGKALLEADPNGPTVIAVSKVNKDPHAG-LIVTGRVFSGTIREGDEI------YIIGRKMK---KKVLQTYIYMG 347          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_IGNH4 (Elongation factor 2 OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=fusA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.040e-12
Identity = 38/118 (32.20%), Postives = 66/118 (55.93%), Query Frame = 2
Query:   71 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVE 424
            P    LL+M++  +P+P  AQKYRV  L++G ++ +   A+ NCDP GPL+++++ M       R  A GRV++G  + G +V ++     PG+        + +  I+MG  +E V+
Sbjct:  246 PLHETLLDMVVRWVPNPREAQKYRVPRLWKGDINSELGKAMLNCDPEGPLVVFINDMRLDPHTKRLVATGRVWAGTATAGKEVWLVNAQ-KPGK--------ILQVSIYMGPDREIVD 354          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_THEGJ (Elongation factor 2 OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=fusA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.277e-12
Identity = 44/134 (32.84%), Postives = 73/134 (54.48%), Query Frame = 2
Query:   23 DLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVE 424
            +L  K  +K + Q   P    +L+M++ HLP+P  AQKYR+ +L+ G ++     A+  CDP G +++ V+K+I     G   A GRV+SG V TG +V      Y+   K+      +Q+  I+MG ++  +E
Sbjct:  228 ELTNKGDLKGLRQK-APLHVVVLDMVVRHLPNPLEAQKYRIPHLWRGDINSDVGQAMLKCDPKGKMVMVVTKIILDKHAGE-VATGRVWSGTVKTGQEV------YLINSKRK---ARIQQVGIYMGPERINME 350          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_SULTO (Elongation factor 2 OS=Sulfolobus tokodaii GN=fusA PE=3 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 6.891e-12
Identity = 43/119 (36.13%), Postives = 64/119 (53.78%), Query Frame = 2
Query:   68 LPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVE 424
            +P   ALLE +I  +P+P  AQKYR+  +++G LD   A A+ N DPNGP++L +S M      G   A GRVFSG +  G ++      ++   K+   V  V    ++MG  +E  E
Sbjct:  244 VPIHEALLETVIKFVPNPRDAQKYRIPKIWKGDLDSDIAKAMINADPNGPIVLMISDMKVDPHAG-LVATGRVFSGTLRAGEEI------WLVNAKRQQRVLQVS---LYMGPTRELAE 352          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_THESM (Elongation factor 2 OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=fusA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 9.001e-12
Identity = 38/118 (32.20%), Postives = 69/118 (58.47%), Query Frame = 2
Query:   71 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVE 424
            P    +L+M++ HLP+P  AQKYR+ +L+ G ++ +   ++ +C+P G +++ V+K+I     G   A GRV+SG V TG +V I     +  ++K      +Q+  I+MG ++  +E
Sbjct:  243 PLHVVVLDMVVRHLPNPVEAQKYRIPHLWRGEIESEIGQSMASCNPKGKMVMVVTKIIIDKHAGE-VATGRVWSGTVKTGQEVHI-----ITAKRK----ARIQQVGIYMGPERINME 350          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_PICTO (Elongation factor 2 OS=Picrophilus torridus GN=fusA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.176e-11
Identity = 33/87 (37.93%), Postives = 54/87 (62.07%), Query Frame = 2
Query:   71 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMG 331
            P    +L+M+I +LP+P  AQKYR+  +++G LD +   A+ +CD NGP+ + V+K+I     G   A GR+FSG +  G ++ + G
Sbjct:  243 PLHKVVLDMVIKNLPNPREAQKYRIPQIWKGDLDSEIGKAMLSCDDNGPVSMMVTKIIIDPHAGE-IAVGRLFSGIIRKGSELYVSG 328          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_METVS (Elongation factor 2 OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=fusA PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.176e-11
Identity = 40/117 (34.19%), Postives = 64/117 (54.70%), Query Frame = 2
Query:   71 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETV 421
            P    +L+M I HLP+P  AQKYR+ N+++G  + +   ++  CDPNGPL   V+K+I     G   A  R+FSG++  G ++      Y+ G K+       Q+  I+MG ++  V
Sbjct:  243 PLHEVILDMAIKHLPNPLQAQKYRIPNIWKGDAESEVGKSMAMCDPNGPLAGVVTKIIVDKHAGSISAC-RLFSGRIKQGDEL------YLVGSKQK---ARAQQVAIFMGAERVQV 349          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_METKA (Elongation factor 2 OS=Methanopyrus kandleri GN=fusA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.005e-11
Identity = 39/111 (35.14%), Postives = 60/111 (54.05%), Query Frame = 2
Query:   71 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMG 403
            P    +L+M++ HLP P TAQ+YR+E ++ G  + +    +R CDPNG L + V+ +      G   A GRV+SG +  G +V      Y+   KK+     VQ+  I+MG
Sbjct:  765 PVYQVVLDMVVKHLPDPVTAQEYRIEQIWPGDPESEDGKTLRKCDPNGKLAMVVTDVRIDEHAGE-VATGRVYSGTIREGQQV------YLASSKKE---TRVQQVGIYMG 865          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_ARCFU (Elongation factor 2 OS=Archaeoglobus fulgidus GN=fusA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.005e-11
Identity = 31/86 (36.05%), Postives = 54/86 (62.79%), Query Frame = 2
Query:   71 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIM 328
            P    +L+M+I HLPSP  AQK R+  +++G ++ +   A+ NCDP GP+ L ++K++     G   A GR++SG +  G+++ I+
Sbjct:  241 PLYQVVLDMVIRHLPSPIEAQKERIAVIWKGDINSEVGKAMVNCDPKGPVALMITKIVVEPQAGE-IAVGRLYSGTIRPGMELYIV 325          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_METS5 (Elongation factor 2 OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=fusA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.619e-11
Identity = 33/84 (39.29%), Postives = 54/84 (64.29%), Query Frame = 2
Query:   68 LPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKV 319
            +P + ALL+ +I  +P+P  AQKYR+  +++G LD++ A ++ N DPNGP+++ ++ M      G   A GRVFSG +  G +V
Sbjct:  244 VPINEALLDAVIKFVPNPVDAQKYRIPKIWKGDLDNELAKSMLNADPNGPVVMMITDMKVDPHAG-LVATGRVFSGTIRPGSEV 326          
The following BLAST results are available for this feature:
BLAST of CF509801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
EF2_PYRIL3.093e-1237.84Elongation factor 2 OS=Pyrobaculum islandicum (str... [more]
EF2_IGNH44.040e-1232.20Elongation factor 2 OS=Ignicoccus hospitalis (stra... [more]
EF2_THEGJ5.277e-1232.84Elongation factor 2 OS=Thermococcus gammatolerans ... [more]
EF2_SULTO6.891e-1236.13Elongation factor 2 OS=Sulfolobus tokodaii GN=fusA... [more]
EF2_THESM9.001e-1232.20Elongation factor 2 OS=Thermococcus sibiricus (str... [more]
EF2_PICTO1.176e-1137.93Elongation factor 2 OS=Picrophilus torridus GN=fus... [more]
EF2_METVS1.176e-1134.19Elongation factor 2 OS=Methanococcus vannielii (st... [more]
EF2_METKA2.005e-1135.14Elongation factor 2 OS=Methanopyrus kandleri GN=fu... [more]
EF2_ARCFU2.005e-1136.05Elongation factor 2 OS=Archaeoglobus fulgidus GN=f... [more]
EF2_METS52.619e-1139.29Elongation factor 2 OS=Metallosphaera sedula (stra... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-309 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-81_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509801 ID=CF509801; Name=CF509801; organism=Citrus sinensis; type=EST; length=426bp
CACGATGAAGTCAGAAGAGAAGGATTTGATGGGCAAGGCATTGATGAAGC
GTGTCATGCAGACCTGGCTTCCTGCAAGTAGTGCACTTTTGGAAATGATG
ATCTTTCACCTTCCCTCTCCTTCCACGGCCCAAAAATATCGTGTTGAGAA
CTTGTATGAGGGTCCTCTTGATGATCAATATGCTAATGCTATTCGGAACT
GTGATCCTAATGGTCCTCTTATGCTCTATGTATCTAAGATGATTCCTGCA
TCTGATAAGGGTAGGTTCTTTGCTTTCGGTCGTGTGTTTTCTGGTAAGGT
GTCAACAGGTTTGAAGGTCAGGATCATGGGTCCAAACTATGTTCCTGGTG
AGAAGAAAGATTTGTATGTTAAGAGCGTCCAAAGGACTGTTATTTGGATG
GGAAAGAAGCAGGAAACCGTTGAGGA
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