CF509801

Overview
NameCF509801
Unique NameCF509801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length426
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_METMP (Elongation factor 2 OS=Methanococcus maripaludis GN=fusA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.619e-11
Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = 2
Query:   71 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMG 331
            P    +L+M I HLP+P TAQKYR+ N+++G  +     ++  CDPNGPL   V+K+I     G   A  R+FSG++  G  + ++G
Sbjct:  243 PLHEVVLDMSIKHLPNPLTAQKYRIPNIWKGDAESTIGKSMVACDPNGPLAGVVTKIIVDKHAGAISAC-RLFSGRIKQGDDLYLVG 328          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_METM7 (Elongation factor 2 OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=fusA PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.467e-11
Identity = 33/87 (37.93%), Postives = 52/87 (59.77%), Query Frame = 2
Query:   71 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMG 331
            P    +L+M I HLP+P  AQKYR+ N+++G  + +   ++  CDPNGPL   V+K+I     G   A  R+FSG++  G  + ++G
Sbjct:  243 PLHEVILDMAIKHLPNPLQAQKYRIPNIWKGDAESEIGKSMVACDPNGPLAGVVTKIIVDKHAGAISAC-RLFSGRIKQGDDLYLVG 328          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_SULSO (Elongation factor 2 OS=Sulfolobus solfataricus GN=fusA PE=1 SV=3)

HSP 1 Score: 65.855 bits (159), Expect = 7.619e-11
Identity = 33/80 (41.25%), Postives = 50/80 (62.50%), Query Frame = 2
Query:   71 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTG 310
            P + ALL+  I  +P+P  AQKYR+  +++G LD++ A A+ N DPNGP++  ++ M      G   A GRVFSG + +G
Sbjct:  245 PINEALLDAAIKFVPNPIEAQKYRIPKIWKGDLDNELAKAMLNADPNGPIVFMITDMKVDPHAG-LVATGRVFSGTLRSG 323          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_SULIY (Elongation factor 2 OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.619e-11
Identity = 33/80 (41.25%), Postives = 50/80 (62.50%), Query Frame = 2
Query:   71 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTG 310
            P + ALL+  I  +P+P  AQKYR+  +++G LD++ A A+ N DPNGP++  ++ M      G   A GRVFSG + +G
Sbjct:  245 PINEALLDAAIKFVPNPIEAQKYRIPKIWKGDLDNELAKAMLNADPNGPIVFMITDMKVDPHAG-LVATGRVFSGTLRSG 323          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_SULIN (Elongation factor 2 OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=fusA PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.619e-11
Identity = 33/80 (41.25%), Postives = 50/80 (62.50%), Query Frame = 2
Query:   71 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTG 310
            P + ALL+  I  +P+P  AQKYR+  +++G LD++ A A+ N DPNGP++  ++ M      G   A GRVFSG + +G
Sbjct:  245 PINEALLDAAIKFVPNPIEAQKYRIPKIWKGDLDNELAKAMLNADPNGPIVFMITDMKVDPHAG-LVATGRVFSGTLRSG 323          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_SULIM (Elongation factor 2 OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.619e-11
Identity = 33/80 (41.25%), Postives = 50/80 (62.50%), Query Frame = 2
Query:   71 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTG 310
            P + ALL+  I  +P+P  AQKYR+  +++G LD++ A A+ N DPNGP++  ++ M      G   A GRVFSG + +G
Sbjct:  245 PINEALLDAAIKFVPNPIEAQKYRIPKIWKGDLDNELAKAMLNADPNGPIVFMITDMKVDPHAG-LVATGRVFSGTLRSG 323          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_SULIL (Elongation factor 2 OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=fusA PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.619e-11
Identity = 33/80 (41.25%), Postives = 50/80 (62.50%), Query Frame = 2
Query:   71 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTG 310
            P + ALL+  I  +P+P  AQKYR+  +++G LD++ A A+ N DPNGP++  ++ M      G   A GRVFSG + +G
Sbjct:  245 PINEALLDAAIKFVPNPIEAQKYRIPKIWKGDLDNELAKAMLNADPNGPIVFMITDMKVDPHAG-LVATGRVFSGTLRSG 323          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_SULIK (Elongation factor 2 OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=fusA PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.619e-11
Identity = 33/80 (41.25%), Postives = 50/80 (62.50%), Query Frame = 2
Query:   71 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTG 310
            P + ALL+  I  +P+P  AQKYR+  +++G LD++ A A+ N DPNGP++  ++ M      G   A GRVFSG + +G
Sbjct:  245 PINEALLDAAIKFVPNPIEAQKYRIPKIWKGDLDNELAKAMLNADPNGPIVFMITDMKVDPHAG-LVATGRVFSGTLRSG 323          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_SULIA (Elongation factor 2 OS=Sulfolobus islandicus (strain M.16.27) GN=fusA PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.619e-11
Identity = 33/80 (41.25%), Postives = 50/80 (62.50%), Query Frame = 2
Query:   71 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTG 310
            P + ALL+  I  +P+P  AQKYR+  +++G LD++ A A+ N DPNGP++  ++ M      G   A GRVFSG + +G
Sbjct:  245 PINEALLDAAIKFVPNPIEAQKYRIPKIWKGDLDNELAKAMLNADPNGPIVFMITDMKVDPHAG-LVATGRVFSGTLRSG 323          
BLAST of CF509801 vs. ExPASy Swiss-Prot
Match: EF2_SULAC (Elongation factor 2 OS=Sulfolobus acidocaldarius GN=fusA PE=1 SV=3)

HSP 1 Score: 65.855 bits (159), Expect = 7.619e-11
Identity = 33/84 (39.29%), Postives = 52/84 (61.90%), Query Frame = 2
Query:   68 LPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKV 319
            +P   ALL+ +I  +P+P  +QKYR+  +++G LD + A A+ N DPNGP+++ ++ M      G   A GRVFSG +  G +V
Sbjct:  244 VPIHEALLDAVIKFVPNPRDSQKYRIPKIWKGDLDSEIAKAMINADPNGPIVMMINDMKVDPHAG-LVATGRVFSGTLRAGEEV 326          
The following BLAST results are available for this feature:
BLAST of CF509801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
EF2_METMP2.619e-1139.08Elongation factor 2 OS=Methanococcus maripaludis G... [more]
EF2_METM74.467e-1137.93Elongation factor 2 OS=Methanococcus maripaludis (... [more]
EF2_SULSO7.619e-1141.25Elongation factor 2 OS=Sulfolobus solfataricus GN=... [more]
EF2_SULIY7.619e-1141.25Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIN7.619e-1141.25Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIM7.619e-1141.25Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIL7.619e-1141.25Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIK7.619e-1141.25Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULIA7.619e-1141.25Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_SULAC7.619e-1139.29Elongation factor 2 OS=Sulfolobus acidocaldarius G... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-309 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-81_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509801 ID=CF509801; Name=CF509801; organism=Citrus sinensis; type=EST; length=426bp
CACGATGAAGTCAGAAGAGAAGGATTTGATGGGCAAGGCATTGATGAAGC
GTGTCATGCAGACCTGGCTTCCTGCAAGTAGTGCACTTTTGGAAATGATG
ATCTTTCACCTTCCCTCTCCTTCCACGGCCCAAAAATATCGTGTTGAGAA
CTTGTATGAGGGTCCTCTTGATGATCAATATGCTAATGCTATTCGGAACT
GTGATCCTAATGGTCCTCTTATGCTCTATGTATCTAAGATGATTCCTGCA
TCTGATAAGGGTAGGTTCTTTGCTTTCGGTCGTGTGTTTTCTGGTAAGGT
GTCAACAGGTTTGAAGGTCAGGATCATGGGTCCAAACTATGTTCCTGGTG
AGAAGAAAGATTTGTATGTTAAGAGCGTCCAAAGGACTGTTATTTGGATG
GGAAAGAAGCAGGAAACCGTTGAGGA
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