CF509805

Overview
NameCF509805
Unique NameCF509805
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length424
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509805 vs. ExPASy Swiss-Prot
Match: METK4_BRAJU (S-adenosylmethionine synthetase 4 OS=Brassica juncea GN=MSAMS4 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.475e-15
Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 3
Query:    6 INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 119
            INLDLKRGGN RF KTAAYGHFGRDDPDFTWEV+KPLK
Sbjct:  350 INLDLKRGGNFRFQKTAAYGHFGRDDPDFTWEVIKPLK 387          
BLAST of CF509805 vs. ExPASy Swiss-Prot
Match: METK_MUSAC (S-adenosylmethionine synthetase OS=Musa acuminata GN=METK PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.456e-15
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 3
Query:    3 TINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 137
            TINL LKRGG  R+LKTAAYGHFGRDDPDFTWEVVKPL+ EKP A
Sbjct:  350 TINLGLKRGGY-RYLKTAAYGHFGRDDPDFTWEVVKPLELEKPAA 393          
BLAST of CF509805 vs. ExPASy Swiss-Prot
Match: METK3_HORVU (S-adenosylmethionine synthetase 3 OS=Hordeum vulgare GN=SAM3 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.442e-14
Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 3
Query:    3 TINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 137
            +INLDLK+GGN RF+KTAAYGHFGRDD DFTWEVVKPLK++K  A
Sbjct:  351 SINLDLKKGGN-RFIKTAAYGHFGRDDADFTWEVVKPLKFDKASA 394          
BLAST of CF509805 vs. ExPASy Swiss-Prot
Match: METK1_TRIMO (S-adenosylmethionine synthetase 1 OS=Triticum monococcum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.197e-14
Identity = 35/45 (77.78%), Postives = 41/45 (91.11%), Query Frame = 3
Query:    3 TINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 137
            +INLDLK+GGN RF+KTAAYGHFGR+D DFTWEVVKPLK++K  A
Sbjct:  351 SINLDLKKGGN-RFIKTAAYGHFGREDADFTWEVVKPLKFDKASA 394          
BLAST of CF509805 vs. ExPASy Swiss-Prot
Match: METK1_VITVI (S-adenosylmethionine synthetase 1 OS=Vitis vinifera GN=METK1 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.481e-14
Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 3
Query:    3 TINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 128
            +INLDLKRGGN RF KTAAYGHFGRDDPDF+WE VK LK EK
Sbjct:  349 SINLDLKRGGNFRFQKTAAYGHFGRDDPDFSWETVKQLKPEK 390          
BLAST of CF509805 vs. ExPASy Swiss-Prot
Match: METK2_HORVU (S-adenosylmethionine synthetase 2 OS=Hordeum vulgare GN=SAM2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.158e-14
Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = 3
Query:    3 TINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 137
            +INLDLK+GG  RF+KTAAYGHFGRDD DFTWEVVKPLK++K  A
Sbjct:  351 SINLDLKKGGK-RFIKTAAYGHFGRDDADFTWEVVKPLKFDKASA 394          
BLAST of CF509805 vs. ExPASy Swiss-Prot
Match: METK3_VITVI (S-adenosylmethionine synthetase 3 OS=Vitis vinifera GN=METK3 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.083e-13
Identity = 34/38 (89.47%), Postives = 34/38 (89.47%), Query Frame = 3
Query:    6 INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 119
            INLDLKRGGN RF KTAAYGHFGRDDPDFTWE VK LK
Sbjct:  350 INLDLKRGGNFRFQKTAAYGHFGRDDPDFTWETVKLLK 387          
BLAST of CF509805 vs. ExPASy Swiss-Prot
Match: METK1_ACTCH (S-adenosylmethionine synthetase 1 OS=Actinidia chinensis GN=SAM1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.060e-13
Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 3
Query:    6 INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 119
            INLDLKRGGN R+ KTAAYGHFGRDDPDFTWE VK LK
Sbjct:  350 INLDLKRGGNLRYQKTAAYGHFGRDDPDFTWETVKILK 387          
BLAST of CF509805 vs. ExPASy Swiss-Prot
Match: METK_CAMSI (S-adenosylmethionine synthetase OS=Camellia sinensis GN=SAM PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 8.919e-13
Identity = 31/32 (96.88%), Postives = 31/32 (96.88%), Query Frame = 3
Query:    6 INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 101
            INLDLKRGGN RFLKTAAYGHFGRDDPDFTWE
Sbjct:  350 INLDLKRGGNSRFLKTAAYGHFGRDDPDFTWE 381          

HSP 2 Score: 20.4014 bits (41), Expect = 8.919e-13
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  101 SCEAPQVGKASS 136
            S EAPQVG+ SS
Sbjct:  382 SGEAPQVGQTSS 393          
BLAST of CF509805 vs. ExPASy Swiss-Prot
Match: METK4_POPTR (S-adenosylmethionine synthetase 4 OS=Populus trichocarpa GN=METK4 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.034e-12
Identity = 32/38 (84.21%), Postives = 33/38 (86.84%), Query Frame = 3
Query:    6 INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 119
            INLDL RGGN R+ KTAAYGHFGRDDPDFTWE VK LK
Sbjct:  350 INLDLMRGGNSRYQKTAAYGHFGRDDPDFTWETVKLLK 387          
The following BLAST results are available for this feature:
BLAST of CF509805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
METK4_BRAJU6.475e-1592.11S-adenosylmethionine synthetase 4 OS=Brassica junc... [more]
METK_MUSAC8.456e-1584.44S-adenosylmethionine synthetase OS=Musa acuminata ... [more]
METK3_HORVU1.442e-1480.00S-adenosylmethionine synthetase 3 OS=Hordeum vulga... [more]
METK1_TRIMO4.197e-1477.78S-adenosylmethionine synthetase 1 OS=Triticum mono... [more]
METK1_VITVI5.481e-1483.33S-adenosylmethionine synthetase 1 OS=Vitis vinifer... [more]
METK2_HORVU7.158e-1477.78S-adenosylmethionine synthetase 2 OS=Hordeum vulga... [more]
METK3_VITVI2.083e-1389.47S-adenosylmethionine synthetase 3 OS=Vitis vinifer... [more]
METK1_ACTCH6.060e-1386.84S-adenosylmethionine synthetase 1 OS=Actinidia chi... [more]
METK_CAMSI8.919e-1396.88S-adenosylmethionine synthetase OS=Camellia sinens... [more]
METK4_POPTR1.034e-1284.21S-adenosylmethionine synthetase 4 OS=Populus trich... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-313 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-81_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509805 ID=CF509805; Name=CF509805; organism=Citrus sinensis; type=EST; length=424bp
TGACCATCAATTTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCTTGAAG
ACTGCTGCCTATGGACACTTTGGCAGGGATGACCCAGACTTCACTTGGGA
AGTTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAATTTGAGTTG
AAAAGTGAAAACTATCCCTGCTGTTCAAGTTTGCTTCTATTGGTAGTGGA
TGAATAATTTGAATATTATCTTGCTGCTGCTTTGTAATACTAAGCAAATC
TCCTGTGTTCAGAACTCATACATGTTCCCCATTCAATTCCTTTCTTTTTC
TTCTTTCCCCACTTCTTTTTTGGTTTTGGTTTAATGTACCATGTCACCAC
TGTTGTGTAGTGATATCGATTGAGAATTTTGCTCAACTGGTGCCTGGAAT
TAATAAAATTCTTCCTTTTGCTTA
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