CF509819

Overview
NameCF509819
Unique NameCF509819
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length570
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509819 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 5.092e-12
Identity = 41/113 (36.28%), Postives = 62/113 (54.87%), Query Frame = 2
Query:  206 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGA-AQNCSATTKGNHKLTADV--LPETKDWRESGIVSPVKDQGHCGSCLDF 535
            F  +  ++ K Y++V+E   RF  F  NL  I   N+    Y LGLN+F+D S +EF+   +G+  ++ +        +  D+  LPE+ DWR  G V+PVK QG+C SC  F
Sbjct:   48 FNSWMLKHNKNYKNVDEKLYRFEIFKDNLKYIDERNKMINGYWLGLNEFSDLSNDEFKEKYVGSLPEDYTNQPYDEEFVNEDIVDLPESVDWRAKGAVTPVKHQGYCESCWAF 160          
BLAST of CF509819 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 9.414e-12
Identity = 43/125 (34.40%), Postives = 61/125 (48.80%), Query Frame = 2
Query:  203 SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHK--------LTADVLPETK--DWRESGIVSPVKDQGHCGSCLDF 535
            S+  F  ++G+ Y  +EE + R   F  NL  I   N+K     ++Y L +N+F+D + E+F           +A  KG  K         + D  PE+   DWR  G V+PVKDQG CGSC  F
Sbjct:   19 SWEEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKF-----------NAVMKGYKKGPRPAAVFTSTDAAPESTEVDWRTKGAVTPVKDQGQCGSCWAF 132          

HSP 2 Score: 21.9422 bits (45), Expect = 9.414e-12
Identity = 7/13 (53.85%), Postives = 9/13 (69.23%), Query Frame = 3
Query:  528 WTFSTTGSLEAAY 566
            W FSTTG +E  +
Sbjct:  130 WAFSTTGGIEGQH 142          
BLAST of CF509819 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.134e-11
Identity = 41/99 (41.41%), Postives = 56/99 (56.57%), Query Frame = 2
Query:  254 EMKLRFATFSKNLDLIRSTNRKGLS---YRLGLNKFADWSWEEFQRHRLGA--AQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCLDF 535
            E + RF  F  NL  + + N +      +RLG+N+FAD + EEF+   LGA  A+   A  +       + LPE+ DWRE G V+PVK+QG CGSC  F
Sbjct:   70 EHERRFLVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNEEFRATFLGAKVAERSRAAGERYRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAF 168          
BLAST of CF509819 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.134e-11
Identity = 45/107 (42.06%), Postives = 54/107 (50.47%), Query Frame = 2
Query:  230 GKIYESVEEMKLRFATFSKNLDLIRSTNRK-GLSYRLGLNKFADWSWEEFQRHRLGA---AQNCSATTKGNHKLTADVLPETKDWRESGIVSP-VKDQGHCGSCLDF 535
            GK Y  + E + RF  F  NL  I   N     SY  GLNKF+D + +EFQ   LG     ++ S   +       DVLP+  DWRE G V P VK QG CGSC  F
Sbjct:   49 GKNYNGLGEKERRFKIFKDNLKRIEEHNSDPNRSYERGLNKFSDLTADEFQASYLGGKMEKKSLSDVAERYQYKEGDVLPDEVDWRERGAVVPRVKRQGECGSCWAF 155          
BLAST of CF509819 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.134e-11
Identity = 46/127 (36.22%), Postives = 65/127 (51.18%), Query Frame = 2
Query:  164 SVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNH--KLTADVLPETKDWRESGIVSPVKDQGHCGSC 526
            +++ VI  A     +A F + + + Y+S+ E KLRF  F   L  I   N K      +Y L +NKF+D + EEF R  L   +      +G     LT    PE+ DWR  G+V PV++QG CGSC
Sbjct:    9 ALIVVINAASDQELWADFKKTHARTYKSLREEKLRFNIFQDTLRQIAEHNVKYENGESTYYLAINKFSDITDEEF-RDMLMKNEASRPNLEGLEVADLTVGAAPESIDWRSKGVVLPVRNQGECGSC 134          
BLAST of CF509819 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 69.707 bits (169), Expect = 1.134e-11
Identity = 41/107 (38.32%), Postives = 53/107 (49.53%), Query Frame = 2
Query:  224 RYGKIYESVEEMKLRFATFSKNLDLIRSTNRK-GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNH--KLTADVLPETKDWRESGIVSPVKDQGHCGSCLDF 535
            +YGK Y S+ E + RF  F + L  I   N     SY++GLN+FAD + EEF+   L      + T   N        VLP   DWR +G V  +K QG CG C  F
Sbjct:   48 KYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLRFTSGSNKTKVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAF 154          
BLAST of CF509819 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 3.301e-11
Identity = 40/108 (37.04%), Postives = 61/108 (56.48%), Query Frame = 2
Query:  224 RYGKIYESVEEMKLRFATFSKNLDLIRSTNRK-GLS---YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCLDF 535
            +Y K Y  VEE +L+ A + +NL +I+  N++ GL    + + +N FAD + EEF++         + T     K  +  LP  KDWR+ G V+PV++QG CGSC  F
Sbjct:   35 KYAKSYSPVEE-ELKRAVWEENLKMIQLHNKENGLGKNGFTMEMNAFADTTGEEFRKSLSDILIPAAVTNPSAQKQVSIGLPNFKDWRKEGYVTPVRNQGKCGSCWAF 141          
BLAST of CF509819 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 5.630e-11
Identity = 41/112 (36.61%), Postives = 58/112 (51.79%), Query Frame = 2
Query:  221 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGN-HKLTADV------LPETKDWRESGIVSPVKDQGHCGSCLDF 535
            R +  +  S+ E   RF  F  NL  + +TN+    Y+L LNKFAD +  EF+    G+  N     +G  H+  A +      +P + DWR+ G V+ VKDQG CGSC  F
Sbjct:   44 RSHHTVSRSLGEKHKRFNVFKANLMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHPRMFRGTPHENGAFMYEKVVSVPPSVDWRKKGAVTDVKDQGQCGSCWAF 155          
BLAST of CF509819 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.630e-11
Identity = 45/127 (35.43%), Postives = 64/127 (50.39%), Query Frame = 2
Query:  206 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGL------------SYRLGLNKFADWSWEEFQRHRLGAAQNCSA--TTKGNH--KLTADV-LPETKDWRESGIVSPVKDQGHCGSCLDF 535
            F  F ++Y K Y+  +E + R+  F  NL+ I S NR+ L            S + G+NKF+D + +E      G   N S   T   N   K   D+ LP+  DWR++  V+P+KDQG CGSC  F
Sbjct:   57 FKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNKFSDKTPDEVLHSNTGFFLNLSQHYTLCENRIVKGAPDIRLPDYYDWRDTNKVTPIKDQGVCGSCWAF 183          
BLAST of CF509819 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.604e-11
Identity = 38/112 (33.93%), Postives = 56/112 (50.00%), Query Frame = 2
Query:  221 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVL-------PETKDWRESGIVSPVKDQGHCGSCLDF 535
            R +  +  S+ E   RF  F  N+  + +TN+    Y+L LNKFAD +  EF+    G+  N     +G+   +   +       P + DWR+ G V+ VKDQG CGSC  F
Sbjct:   44 RSHHTVSRSLGEKHKRFNVFKANVMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHHKMFRGSQHGSGTFMYEKVGSVPASVDWRKKGAVTDVKDQGQCGSCWAF 155          
The following BLAST results are available for this feature:
BLAST of CF509819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
PAPA4_CARPA5.092e-1236.28Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
CYSP1_HOMAM9.414e-1234.40Digestive cysteine proteinase 1 OS=Homarus america... [more]
ORYB_ORYSJ1.134e-1141.41Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CPR2_ARATH1.134e-1142.06Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CATLL_PHACE1.134e-1136.22Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
ACTN_ACTCH1.134e-1138.32Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
CATJ_RAT3.301e-1137.04Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
CYSEP_PHAVU5.630e-1136.61Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CATV_NPVHZ5.630e-1135.43Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CYSEP_VIGMU9.604e-1133.93Vignain OS=Vigna mungo PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-327 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-81_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509819 ID=CF509819; Name=CF509819; organism=Citrus sinensis; type=EST; length=570bp
CAATGCAAAACAGACACAATCATTAGGCATGGCTCGCCCTGAACATTTGG
TCTCGTCCATCATCTTGTTGCTTTGCTGCGCTGCCGCAGCATCAGCATCA
AGCTTCGACGACTCCAATCCGATCAGATTGGTATCATCGGACGGTCTCCG
TGACTTCGAGACCTCCGTCCTCCAGGTGATCGGCCAAGCCCGCCATGCTC
TCTCCTTTGCCCGTTTTGCTCGCAGGTATGGAAAGATTTACGAGTCCGTT
GAGGAGATGAAGCTCCGGTTCGCGACTTTCTCCAAGAACTTGGATTTAAT
CAGATCTACGAATCGTAAAGGCCTATCTTACAGGCTCGGGTTGAACAAGT
TTGCTGATTGGAGCTGGGAAGAGTTCCAAAGGCACAGGTTGGGAGCTGCA
CAAAACTGCTCTGCCACTACAAAAGGAAATCACAAGCTTACTGCTGATGT
GCTTCCAGAAACGAAAGACTGGAGGGAATCTGGCATAGTAAGCCCAGTTA
AAGACCAAGGTCACTGTGGATCTTGCTTGGACTTTCAGCACGACTGGATC
TCTTGAGGCTGCTTACCACC
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