CF509824
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509824 vs. ExPASy Swiss-Prot
Match: FSH_DROME (Homeotic protein female sterile OS=Drosophila melanogaster GN=fs(1)h PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 4.548e-13 Identity = 37/76 (48.68%), Postives = 46/76 (60.53%), Query Frame = 1 Query: 10 LGLKDYYTIIKHPMDLGTVKARLSKNLYKTPREFAEDVRITFSNAMLYNPKGQDVHIMAEELSKIFEDTWKKIEAE 237 LGL DY+ IIK PMDLGTVK ++ YK+ EFA DVR+ F+N YNP DV M +L +FE + I E Sbjct: 512 LGLHDYHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANIPDE 587 HSP 2 Score: 70.8626 bits (172), Expect = 5.028e-12 Identity = 32/68 (47.06%), Postives = 44/68 (64.71%), Query Frame = 1 Query: 4 KGLGLKDYYTIIKHPMDLGTVKARLSKNLYKTPREFAEDVRITFSNAMLYNPKGQDVHIMAEELSKIF 207 K L L DY+ IIK PMD+GT+K RL N Y + +E +D F+N +YN G+DV +MA+ L K+F Sbjct: 66 KKLNLPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVF 133
BLAST of CF509824 vs. ExPASy Swiss-Prot
Match: BRDT_HUMAN (Bromodomain testis-specific protein OS=Homo sapiens GN=BRDT PE=1 SV=4) HSP 1 Score: 73.9442 bits (180), Expect = 5.939e-13 Identity = 35/79 (44.30%), Postives = 47/79 (59.49%), Query Frame = 1 Query: 1 VKGLGLKDYYTIIKHPMDLGTVKARLSKNLYKTPREFAEDVRITFSNAMLYNPKGQDVHIMAEELSKIFEDTWKKIEAE 237 V LGL +YY ++K+PMDLGT+K ++ YK +FA DVR+ F N YNP +V MA L +FE + KI E Sbjct: 301 VNALGLHNYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIE 379 HSP 2 Score: 70.0922 bits (170), Expect = 8.576e-12 Identity = 34/66 (51.52%), Postives = 40/66 (60.61%), Query Frame = 1 Query: 10 LGLKDYYTIIKHPMDLGTVKARLSKNLYKTPREFAEDVRITFSNAMLYNPKGQDVHIMAEELSKIF 207 L L DYYTIIK+PMDL T+K RL Y E ED FSN LYN G D+ +MA+ L K+F Sbjct: 61 LQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLF 126
BLAST of CF509824 vs. ExPASy Swiss-Prot
Match: BRDT_MOUSE (Bromodomain testis-specific protein OS=Mus musculus GN=Brdt PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.323e-12 Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 1 Query: 10 LGLKDYYTIIKHPMDLGTVKARLSKNLYKTPREFAEDVRITFSNAMLYNPKGQDVHIMAEELSKIFEDTWKKIEAE 237 LGL +YY ++K+PMDLGT+K ++ YK EFA DVR+ F N YNP +V MA L +FE + KI E Sbjct: 303 LGLHNYYDVVKNPMDLGTIKGKMDNQEYKDAYEFAADVRLMFMNCYKYNPPDHEVVAMARTLQDVFELHFAKIPDE 378 HSP 2 Score: 70.0922 bits (170), Expect = 8.576e-12 Identity = 34/66 (51.52%), Postives = 40/66 (60.61%), Query Frame = 1 Query: 10 LGLKDYYTIIKHPMDLGTVKARLSKNLYKTPREFAEDVRITFSNAMLYNPKGQDVHIMAEELSKIF 207 L L DYYTIIK PMDL T+K RL Y+ E ED FSN LYN G D+ +MA+ L K+F Sbjct: 60 LKLPDYYTIIKTPMDLNTIKKRLENKYYEKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALEKLF 125
BLAST of CF509824 vs. ExPASy Swiss-Prot
Match: BRD3_MOUSE (Bromodomain-containing protein 3 OS=Mus musculus GN=Brd3 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.463e-11 Identity = 34/78 (43.59%), Postives = 46/78 (58.97%), Query Frame = 1 Query: 4 KGLGLKDYYTIIKHPMDLGTVKARLSKNLYKTPREFAEDVRITFSNAMLYNPKGQDVHIMAEELSKIFEDTWKKIEAE 237 + L L DY+ IIKHPMDL TVK ++ Y + FA D+R+ FSN YNP +V MA +L +FE + K+ E Sbjct: 340 EALELHDYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 417
BLAST of CF509824 vs. ExPASy Swiss-Prot
Match: CBP_MOUSE (CREB-binding protein OS=Mus musculus GN=Crebbp PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.911e-11 Identity = 33/91 (36.26%), Postives = 53/91 (58.24%), Query Frame = 1 Query: 10 LGLKDYYTIIKHPMDLGTVKARLSKNLYKTPREFAEDVRITFSNAMLYNPKGQDVHIMAEELSKIFEDTWKKIEAEYNFSRQSKMGRKSDF 282 LG+ DY+ I+K+PMDL T+K +L Y+ P ++ +DVR+ F+NA LYN K V+ +L+++FE + + GRK +F Sbjct: 1121 LGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVRLMFNNAWLYNRKTSRVYKFCSKLAEVFEQEIDPVMQSLGYC----CGRKYEF 1207
BLAST of CF509824 vs. ExPASy Swiss-Prot
Match: BRD3_HUMAN (Bromodomain-containing protein 3 OS=Homo sapiens GN=BRD3 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.911e-11 Identity = 35/78 (44.87%), Postives = 46/78 (58.97%), Query Frame = 1 Query: 4 KGLGLKDYYTIIKHPMDLGTVKARLSKNLYKTPREFAEDVRITFSNAMLYNPKGQDVHIMAEELSKIFEDTWKKIEAE 237 + L L DY+ IIKHPMDL TVK ++ Y + FA DVR+ FSN YNP +V MA +L +FE + K+ E Sbjct: 341 EALELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
BLAST of CF509824 vs. ExPASy Swiss-Prot
Match: YK82_SCHPO (Bromodomain-containing protein C631.02 OS=Schizosaccharomyces pombe GN=SPAC631.02 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.495e-11 Identity = 32/88 (36.36%), Postives = 51/88 (57.95%), Query Frame = 1 Query: 13 GLKDYYTIIKHPMDLGTVKARLSKNLYKTPREFAEDVRITFSNAMLYNPKGQDVHIMAEELSKIFEDTWKKIEAEYNFSRQSKMGRKS 276 G DY+ +IKHPMDLGT++ +L+ N Y + + F D+ + F N +N G VH+M ++L IF+ W + +F ++ MG S Sbjct: 468 GCPDYFKVIKHPMDLGTMQNKLNHNEYASMKAFEADMVLMFKNCYKFNSAGTPVHLMGKKLESIFQKLWAN---KPDFDSETYMGMSS 552
BLAST of CF509824 vs. ExPASy Swiss-Prot
Match: Y3800_DICDI (Ankyrin repeat, bromo and BTB domain-containing protein DDB_G0293800 OS=Dictyostelium discoideum GN=DDB_G0293800 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.495e-11 Identity = 31/66 (46.97%), Postives = 42/66 (63.64%), Query Frame = 1 Query: 13 GLKDYYTIIKHPMDLGTVKARLSKNLYKTPREFAEDVRITFSNAMLYNPKGQDVHIMAEELSKIFE 210 G+ DY+ +IKHPMDLGT+K +L N Y T ++FA DVR+ F NA+ YN V A+ L F+ Sbjct: 551 GIPDYFDVIKHPMDLGTIKGKLDNNGYSTIKDFAADVRLMFENALTYNADSSPVWKHAKTLLNAFD 616 The following BLAST results are available for this feature:
BLAST of CF509824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509824 ID=CF509824; Name=CF509824; organism=Citrus sinensis; type=EST; length=564bpback to top |