CF509845
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509845 vs. ExPASy Swiss-Prot
Match: RS26_MOUSE (40S ribosomal protein S26 OS=Mus musculus GN=Rps26 PE=2 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 6.381e-22 Identity = 44/61 (72.13%), Postives = 52/61 (85.25%), Query Frame = 1 Query: 103 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 285 IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ EA V+D Y LPKLY K+ YCVSCAIHS Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHS 81
BLAST of CF509845 vs. ExPASy Swiss-Prot
Match: RS26_MACFA (40S ribosomal protein S26 OS=Macaca fascicularis GN=RPS26 PE=3 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 6.381e-22 Identity = 44/61 (72.13%), Postives = 52/61 (85.25%), Query Frame = 1 Query: 103 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 285 IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ EA V+D Y LPKLY K+ YCVSCAIHS Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHS 81
BLAST of CF509845 vs. ExPASy Swiss-Prot
Match: RS26_HUMAN (40S ribosomal protein S26 OS=Homo sapiens GN=RPS26 PE=1 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 6.381e-22 Identity = 44/61 (72.13%), Postives = 52/61 (85.25%), Query Frame = 1 Query: 103 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 285 IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ EA V+D Y LPKLY K+ YCVSCAIHS Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHS 81
BLAST of CF509845 vs. ExPASy Swiss-Prot
Match: RS26_BOVIN (40S ribosomal protein S26 OS=Bos taurus GN=RPS26 PE=3 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 6.381e-22 Identity = 44/61 (72.13%), Postives = 52/61 (85.25%), Query Frame = 1 Query: 103 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 285 IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ EA V+D Y LPKLY K+ YCVSCAIHS Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHS 81
BLAST of CF509845 vs. ExPASy Swiss-Prot
Match: RS26_SHEEP (40S ribosomal protein S26 OS=Ovis aries GN=RPS26 PE=3 SV=3) HSP 1 Score: 102.449 bits (254), Expect = 1.088e-21 Identity = 44/61 (72.13%), Postives = 52/61 (85.25%), Query Frame = 1 Query: 103 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 285 IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ EA V+D Y LPKLY K+ YCVSCAIHS Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEAGVFDAYVLPKLYVKLHYCVSCAIHS 81
BLAST of CF509845 vs. ExPASy Swiss-Prot
Match: RS26_CRICR (40S ribosomal protein S26 OS=Cricetus cricetus GN=RPS26 PE=3 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 1.857e-21 Identity = 43/61 (70.49%), Postives = 52/61 (85.25%), Query Frame = 1 Query: 103 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 285 IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ EA V+D Y LPKLY ++ YCVSCAIHS Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVELHYCVSCAIHS 81
BLAST of CF509845 vs. ExPASy Swiss-Prot
Match: RS26_BRUPA (40S ribosomal protein S26 (Fragment) OS=Brugia pahangi PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.857e-21 Identity = 44/61 (72.13%), Postives = 51/61 (83.61%), Query Frame = 1 Query: 103 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 285 IRC+NCG+C PKDKAIK+F+VRNIV AAVRD+ +A YD Y LPKLY K+ YCVSCAIHS Sbjct: 21 IRCTNCGRCAPKDKAIKKFVVRNIVVAAAVRDISDASAYDSYALPKLYHKLHYCVSCAIHS 81
BLAST of CF509845 vs. ExPASy Swiss-Prot
Match: RS26_SCHCO (40S ribosomal protein S26 OS=Schizophyllum commune GN=RPS26 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.167e-21 Identity = 43/63 (68.25%), Postives = 51/63 (80.95%), Query Frame = 1 Query: 100 FIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHSH 288 F+RCSNC +C KDKAIKRF VRN+VE AA+RD+ +A VY Y +PKLY K+ YCVSCAIHSH Sbjct: 20 FVRCSNCSRCVAKDKAIKRFTVRNMVESAAIRDISDASVYPEYAIPKLYIKIAYCVSCAIHSH 82
BLAST of CF509845 vs. ExPASy Swiss-Prot
Match: RS26B_SCHPO (40S ribosomal protein S26-B OS=Schizosaccharomyces pombe GN=rps26b PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 7.055e-21 Identity = 43/63 (68.25%), Postives = 52/63 (82.54%), Query Frame = 1 Query: 97 KFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 285 KF+RC NC + PKDKAIKR+ +RN+VE AA+RD+ EA VY YT+PKLY K+QYCVSCAIHS Sbjct: 19 KFVRCINCSRAVPKDKAIKRWTIRNMVETAAIRDLSEASVYSEYTIPKLYIKLQYCVSCAIHS 81
BLAST of CF509845 vs. ExPASy Swiss-Prot
Match: RS26_NEUCR (40S ribosomal protein S26E OS=Neurospora crassa GN=rps-26 PE=3 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 1.203e-20 Identity = 42/62 (67.74%), Postives = 52/62 (83.87%), Query Frame = 1 Query: 97 KFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIH 282 K IRCSNC +C PKDKAIKRF +RN+VE AA+RD+ +A V+ YT+PK+Y K+QYCVSCAIH Sbjct: 19 KPIRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYTVPKMYLKLQYCVSCAIH 80 The following BLAST results are available for this feature:
BLAST of CF509845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509845 ID=CF509845; Name=CF509845; organism=Citrus sinensis; type=EST; length=487bpback to top |