CF509845
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509845 vs. ExPASy Swiss-Prot
Match: RS26L_HUMAN (Putative 40S ribosomal protein S26-like 1 OS=Homo sapiens GN=RPS26P11 PE=5 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.053e-20 Identity = 42/61 (68.85%), Postives = 50/61 (81.97%), Query Frame = 1 Query: 103 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 285 IRC+NC +C P DKAIK+F++RNIVE AAVRD+ E V+D Y LPKLY K+ YCVSCAIHS Sbjct: 21 IRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFDAYVLPKLYVKLHYCVSCAIHS 81
BLAST of CF509845 vs. ExPASy Swiss-Prot
Match: RS26A_SCHPO (40S ribosomal protein S26-A OS=Schizosaccharomyces pombe GN=rps26a PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.331e-19 Identity = 40/63 (63.49%), Postives = 51/63 (80.95%), Query Frame = 1 Query: 97 KFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 285 KF+RC NC + PKDKAIKR+ +RN+VE AA+RD+ EA VY Y +PK+Y K+QYCVSCAIH+ Sbjct: 19 KFVRCINCSRAVPKDKAIKRWNIRNMVETAAIRDLSEASVYSEYAIPKIYVKLQYCVSCAIHA 81
BLAST of CF509845 vs. ExPASy Swiss-Prot
Match: RS26B_YEAST (40S ribosomal protein S26-B OS=Saccharomyces cerevisiae GN=RPS26B PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.277e-18 Identity = 42/63 (66.67%), Postives = 47/63 (74.60%), Query Frame = 1 Query: 97 KFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 285 K +RC NC K PKDKAIKR +RNIVE AAVRD+ EA VY Y LPK Y K+ YCVSCAIH+ Sbjct: 19 KPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYPEYALPKTYNKLHYCVSCAIHA 81
BLAST of CF509845 vs. ExPASy Swiss-Prot
Match: RS26A_YEAST (40S ribosomal protein S26-A OS=Saccharomyces cerevisiae GN=RPS26A PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.277e-18 Identity = 42/63 (66.67%), Postives = 47/63 (74.60%), Query Frame = 1 Query: 97 KFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 285 K +RC NC K PKDKAIKR +RNIVE AAVRD+ EA VY Y LPK Y K+ YCVSCAIH+ Sbjct: 19 KPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYPEYALPKTYNKLHYCVSCAIHA 81
BLAST of CF509845 vs. ExPASy Swiss-Prot
Match: RS26_DICDI (40S ribosomal protein S26 OS=Dictyostelium discoideum GN=rps26 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.280e-18 Identity = 38/65 (58.46%), Postives = 50/65 (76.92%), Query Frame = 1 Query: 100 FIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD--GYTLPKLYAKMQYCVSCAIHSH 288 +IRC+NC +C PKDKA+KRF +R IVE AAV+D+ + V++ GY P+ Y K QYC+SCAIHSH Sbjct: 20 YIRCTNCARCVPKDKAVKRFYIRPIVENAAVKDISDQGVFNVKGYKFPRTYVKSQYCISCAIHSH 84
BLAST of CF509845 vs. ExPASy Swiss-Prot
Match: RS26_OXYNO (40S ribosomal protein S26 OS=Oxytricha nova GN=RPS26 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.683e-14 Identity = 34/63 (53.97%), Postives = 47/63 (74.60%), Query Frame = 1 Query: 103 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVY--DGYTLPKLYAKMQYCVSCAIHS 285 +RC+NCG+ KDKAIKRF RN+V+ ++ RD+QE Y +T+PK+Y K+ YCVSCAIH+ Sbjct: 21 VRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYAQSDFTMPKIYVKLSYCVSCAIHA 83
BLAST of CF509845 vs. ExPASy Swiss-Prot
Match: RS26_ENCCU (40S ribosomal protein S26 OS=Encephalitozoon cuniculi GN=RPS26 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.415e-13 Identity = 29/61 (47.54%), Postives = 46/61 (75.41%), Query Frame = 1 Query: 103 IRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 285 I+C CG PKDKAIKRF +++++EQA+ D+++A +YD + +P++ K Q+CVSCA H+ Sbjct: 18 IQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEVPRMGYKSQFCVSCACHA 78 The following BLAST results are available for this feature:
BLAST of CF509845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF509845 ID=CF509845; Name=CF509845; organism=Citrus sinensis; type=EST; length=487bpback to top |