CF509848

Overview
NameCF509848
Unique NameCF509848
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length528
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y2589_XANC5 (UPF0061 protein XCV2589 OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=XCV2589 PE=3 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 1.451e-52
Identity = 108/174 (62.07%), Postives = 123/174 (70.69%), Query Frame = 3
Query:    6 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527
            A ++ V P+  V  P L+A S  +A  L L+  E     F   F G     G  P+A  YGGHQFG WAGQLGDGRAI+LGE +     R+ELQLKGAG TPYSR ADG AVLRSSIREFLCSEAMH LG+PTTRAL LV TG+ V RDMFYDG+P+ EPGAIVCRVA SF+RF
Sbjct:   29 AAWSSVLPTP-VAAPYLIAHSAEMAQVLGLEAAEIASAQFAQVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGTDGGRYELQLKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHHLGVPTTRALSLVGTGEAVVRDMFYDGHPQREPGAIVCRVAPSFIRF 201          
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y1992_XYLFT (UPF0061 protein PD_1992 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1992 PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.451e-52
Identity = 108/172 (62.79%), Postives = 121/172 (70.35%), Query Frame = 3
Query:   12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527
            +++V+P+  V  P L+A+S  VA  L  D +E   P F   FSG     G  PYA  YGGHQFG W GQLGDGR ITLGE+L      +ELQLKGAG TPYSR ADG AVLRSSIREFLCSEAMH LGIPTTRAL L+ TG  V RDM YDG+P  EP AIVCRVA SF+RF
Sbjct:   31 WSRVAPTP-VPMPCLLAYSSEVAAILNFDAEELVTPRFVEVFSGNALYTGMQPYAVNYGGHQFGQWVGQLGDGRVITLGELLGADGVYYELQLKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHHLGIPTTRALSLIATGDTVIRDMLYDGHPAPEPSAIVCRVAPSFIRF 201          
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y2392_XANAC (UPF0061 protein XAC2392 OS=Xanthomonas axonopodis pv. citri GN=XAC2392 PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.896e-52
Identity = 106/163 (65.03%), Postives = 116/163 (71.17%), Query Frame = 3
Query:   39 VENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527
            V  P L+A S  +A  L LD  E     F   F G     G  P+A  YGGHQFG WAGQLGDGRAI+LGE +     R+ELQLKGAG TPYSR ADG AVLRSSIREFLCSEAMH LG+PTTRAL LV TG  V RDMFYDG+P+ EPGAIVCRVA SF+RF
Sbjct:   39 VAAPSLIAHSAEMAQVLGLDAAEIASAQFAQVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGTDGGRYELQLKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHHLGVPTTRALSLVGTGDAVVRDMFYDGHPQREPGAIVCRVAPSFIRF 201          
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y396_XANOP (UPF0061 protein PXO_00396 OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=PXO_00396 PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 2.476e-52
Identity = 108/174 (62.07%), Postives = 122/174 (70.11%), Query Frame = 3
Query:    6 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527
            A ++ V P+  V  P L+A S  +A  L LD  E     F   F G     G  P+A  YGGHQFG WAGQLGDGRAI+LGE + +   R+ELQLKGAG TPYSR ADG AVLRSSIREFLCSE+MH LG+PTTRAL LV TG  V RDMFYDG P+ EPGAIVCRVA SF+RF
Sbjct:   29 AAWSAVMPTP-VAAPYLIAHSAEMAHVLGLDASEVASAAFAQVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGIDGGRYELQLKGAGPTPYSRGADGRAVLRSSIREFLCSESMHHLGVPTTRALSLVGTGDAVVRDMFYDGRPQREPGAIVCRVAPSFIRF 201          
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y2718_XANOR (UPF0061 protein XOO2718 OS=Xanthomonas oryzae pv. oryzae GN=XOO2718 PE=3 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 2.476e-52
Identity = 108/174 (62.07%), Postives = 122/174 (70.11%), Query Frame = 3
Query:    6 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527
            A ++ V P+  V  P L+A S  +A  L LD  E     F   F G     G  P+A  YGGHQFG WAGQLGDGRAI+LGE + +   R+ELQLKGAG TPYSR ADG AVLRSSIREFLCSE+MH LG+PTTRAL LV TG  V RDMFYDG P+ EPGAIVCRVA SF+RF
Sbjct:   29 AAWSAVMPTP-VAAPYLIAHSAEMAHVLGLDASEVASAAFAQVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGIDGGRYELQLKGAGPTPYSRGADGRAVLRSSIREFLCSESMHHLGVPTTRALSLVGTGDAVVRDMFYDGRPQREPGAIVCRVAPSFIRF 201          
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y2563_XANOM (UPF0061 protein XOO2563 OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=XOO2563 PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 2.476e-52
Identity = 108/174 (62.07%), Postives = 122/174 (70.11%), Query Frame = 3
Query:    6 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527
            A ++ V P+  V  P L+A S  +A  L LD  E     F   F G     G  P+A  YGGHQFG WAGQLGDGRAI+LGE + +   R+ELQLKGAG TPYSR ADG AVLRSSIREFLCSE+MH LG+PTTRAL LV TG  V RDMFYDG P+ EPGAIVCRVA SF+RF
Sbjct:   29 AAWSAVMPTP-VAAPYLIAHSAEMAHVLGLDASEVASAAFAQVFGGNALYPGMQPWAVNYGGHQFGHWAGQLGDGRAISLGEAIGIDGGRYELQLKGAGPTPYSRGADGRAVLRSSIREFLCSESMHHLGVPTTRALSLVGTGDAVVRDMFYDGRPQREPGAIVCRVAPSFIRF 201          
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y2619_XYLFA (UPF0061 protein XF_2619 OS=Xylella fastidiosa GN=XF_2619 PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 9.407e-52
Identity = 108/172 (62.79%), Postives = 120/172 (69.77%), Query Frame = 3
Query:   12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527
            ++ V+P+  V  P L+A+S  VA  L  D +E   P F   FSG     G  PYA  YGGHQFG W GQLGDGR ITLGE+L      +ELQLKGAG TPYSR ADG AVLRSSIREFLCSEAMH LGIPTTRAL L+ TG  V RDM YDG+P  EP AIVCRVA SF+RF
Sbjct:   31 WSGVAPTP-VPVPCLLAYSSEVAAILNFDAEELVTPRFVEVFSGNALYPGMQPYAVNYGGHQFGQWVGQLGDGRVITLGELLGADGVYYELQLKGAGPTPYSRGADGRAVLRSSIREFLCSEAMHHLGIPTTRALSLIATGDTVIRDMLYDGHPAPEPSAIVCRVAPSFVRF 201          
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y2147_CYTH3 (UPF0061 protein CHU_2147 OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=CHU_2147 PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 3.699e-48
Identity = 103/172 (59.88%), Postives = 120/172 (69.77%), Query Frame = 3
Query:   12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527
            Y  V P+  V +PQL+AWS  VA+ L L   E   P+  L   G T      PYA CY GHQFG WAGQLGDGRAI+LG      S  +ELQLKGAG TPYSR +DG AVLRSS+RE+L SEAMH+LG+PTTRAL LV+TG  V RDMFY+G+   EPGA+V RVA SF+RF
Sbjct:   35 YCSVLPTP-VHHPQLLAWSADVAEMLGL---ESPVPEDVLILGGNTVNPTMKPYASCYAGHQFGNWAGQLGDGRAISLGFCSGKDSMEYELQLKGAGPTPYSRNSDGRAVLRSSLREYLMSEAMHYLGVPTTRALSLVSTGDAVLRDMFYNGHAAYEPGAVVLRVAPSFIRF 202          
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: SELO_HUMAN (Selenoprotein O OS=Homo sapiens GN=SELO PE=2 SV=3)

HSP 1 Score: 187.963 bits (476), Expect = 2.398e-47
Identity = 102/176 (57.95%), Postives = 118/176 (67.05%), Query Frame = 3
Query:    6 ACYTKVSPSAEVENPQLVAWSESVADSLELD--PKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527
            AC+T+V P+  +  P+LVA SE     L L   P      +  LFFSG   L GA P A CY GHQFG +AGQLGDG A+ LGE+     ERWELQLKGAG TP+SR ADG  VLRSSIREFLCSEAM  LG+PTTRA   VT+   V RD+FYDGNPK E   +V RVA +F+RF
Sbjct:   80 ACFTRVQPTP-LRQPRLVALSEPALALLGLGAPPAREAEAEAALFFSGNALLPGAEPAAHCYCGHQFGQFAGQLGDGAAMYLGEVCTATGERWELQLKGAGPTPFSRQADGRKVLRSSIREFLCSEAMFHLGVPTTRAGACVTSESTVVRDVFYDGNPKYEQCTVVLRVASTFIRF 254          
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y2793_FLAJ1 (UPF0061 protein Fjoh_2793 OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=Fjoh_2793 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 4.090e-47
Identity = 97/175 (55.43%), Postives = 123/175 (70.29%), Query Frame = 3
Query:    3 HACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527
            +  ++ V+P+ +  NP+L+  SE  A  + +  +E    +F   FSG   L    PYA CY GHQFG WAGQLGDGRAI L E+ N  +  + LQLKGAGKTPYSR ADGLAVLRSSIRE+LC+EAM+ LG+PTTR+L L+ +G  V RD+ Y+GNP  E GA+VCRVA SF+RF
Sbjct:   29 NTAFSYVNPT-KPSNPKLIHASEETAALVGISKEEIHSEEFLNVFSGKEILPETQPYAMCYAGHQFGNWAGQLGDGRAINLTEVEN-NNTFYTLQLKGAGKTPYSRTADGLAVLRSSIREYLCAEAMYHLGVPTTRSLSLILSGDQVLRDILYNGNPAYEKGAVVCRVAPSFIRF 201          
The following BLAST results are available for this feature:
BLAST of CF509848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 259
Match NameE-valueIdentityDescription
Y2589_XANC51.451e-5262.07UPF0061 protein XCV2589 OS=Xanthomonas campestris ... [more]
Y1992_XYLFT1.451e-5262.79UPF0061 protein PD_1992 OS=Xylella fastidiosa (str... [more]
Y2392_XANAC1.896e-5265.03UPF0061 protein XAC2392 OS=Xanthomonas axonopodis ... [more]
Y396_XANOP2.476e-5262.07UPF0061 protein PXO_00396 OS=Xanthomonas oryzae pv... [more]
Y2718_XANOR2.476e-5262.07UPF0061 protein XOO2718 OS=Xanthomonas oryzae pv. ... [more]
Y2563_XANOM2.476e-5262.07UPF0061 protein XOO2563 OS=Xanthomonas oryzae pv. ... [more]
Y2619_XYLFA9.407e-5262.79UPF0061 protein XF_2619 OS=Xylella fastidiosa GN=X... [more]
Y2147_CYTH33.699e-4859.88UPF0061 protein CHU_2147 OS=Cytophaga hutchinsonii... [more]
SELO_HUMAN2.398e-4757.95Selenoprotein O OS=Homo sapiens GN=SELO PE=2 SV=3[more]
Y2793_FLAJ14.090e-4755.43UPF0061 protein Fjoh_2793 OS=Flavobacterium johnso... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-356 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-82_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509848 ID=CF509848; Name=CF509848; organism=Citrus sinensis; type=EST; length=528bp
TGCATGCCTGTTATACTAAAGTTTCTCCGTCAGCTGAAGTAGAAAATCCT
CAGCTTGTTGCGTGGTCAGAATCAGTGGCCGATTCTCTTGAGTTGGATCC
TAAAGAATTTGAAAGACCAGATTTTCCCCTCTTTTTTTCTGGGGCTACTC
CTTTGGCGGGAGCGGTGCCATATGCTCAATGCTACGGTGGACATCAATTT
GGCATGTGGGCTGGTCAGCTGGGTGATGGTCGGGCAATAACTCTTGGCGA
GATCCTGAATTTGAAGTCGGAAAGGTGGGAATTGCAGCTTAAAGGAGCTG
GGAAGACTCCATATAGCCGCTTTGCTGATGGCCTTGCAGTACTGCGTAGT
AGCATCAGGGAGTTCCTTTGCAGTGAAGCCATGCACTTTTTAGGAATCCC
AACAACTCGTGCACTTTGTCTTGTGACAACAGGAAAATTTGTTACTCGAG
ACATGTTTTACGATGGCAATCCAAAGGAAGAACCTGGTGCAATTGTTTGC
AGAGTTGCTCAATCTTTTTTGCGCTTTG
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