CF509848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: SELO_MOUSE (Selenoprotein O OS=Mus musculus GN=Selo PE=1 SV=3) HSP 1 Score: 183.726 bits (465), Expect = 4.522e-46 Identity = 100/176 (56.82%), Postives = 117/176 (66.48%), Query Frame = 3 Query: 6 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFER--PDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 AC+++ P A + P+LVA SE L L+ E + LFFSG L G P A CY GHQFG +AGQLGDG A+ LGE+ ERWELQLKGAG TP+SR ADG VLRSSIREFLCSEAM LGIPTTRA VT+ V RD+FYDGNPK E +V R+A +F+RF Sbjct: 81 ACFSRARP-APLRRPRLVALSEPALALLGLEASEEAEVEAEAALFFSGNALLPGTEPAAHCYCGHQFGQFAGQLGDGAAMYLGEVCTAAGERWELQLKGAGPTPFSRQADGRKVLRSSIREFLCSEAMFHLGIPTTRAGACVTSESTVMRDVFYDGNPKYEKCTVVLRIAPTFIRF 255
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y1944_BURCJ (UPF0061 protein BceJ2315_19440 OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=BceJ2315_19440 PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 6.757e-42 Identity = 90/170 (52.94%), Postives = 115/170 (67.65%), Query Frame = 3 Query: 27 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 P+A + P +V +S+ VA L+L P +P F F+G A A+PYA Y GHQFG+WAGQLGDGRA+T+GE+ R+ELQLKG G+TPYSR DG AVLRSSIREFLCSEAMH LGIPTTRAL ++ + + V R+ + E A+V RV++SF+RF Sbjct: 41 PAAPLAAPYVVGFSDEVAQLLDLPPTLAAQPGFAELFTGNPTRDWPANAMPYASVYSGHQFGVWAGQLGDGRALTIGELPGTDGRRYELQLKGGGRTPYSRMGDGRAVLRSSIREFLCSEAMHHLGIPTTRALTVIGSDQPVVRE-------EIETAAVVTRVSESFVRF 203
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y6171_BURCA (UPF0061 protein Bcen_6171 OS=Burkholderia cenocepacia (strain AU 1054) GN=Bcen_6171 PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 8.825e-42 Identity = 90/170 (52.94%), Postives = 115/170 (67.65%), Query Frame = 3 Query: 27 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 P+A + P +V +S+ VA L+L P +P F F+G A A+PYA Y GHQFG+WAGQLGDGRA+T+GE+ R+ELQLKG G+TPYSR DG AVLRSSIREFLCSEAMH LGIPTTRAL ++ + + V R+ + E A+V RV++SF+RF Sbjct: 41 PAAPLAAPYVVGFSDDVAQLLDLPPSIAAQPGFAELFAGNPTRDWPAHAMPYASVYSGHQFGVWAGQLGDGRALTIGELPGTDGRRYELQLKGGGRTPYSRMGDGRAVLRSSIREFLCSEAMHHLGIPTTRALTVIGSDQPVVRE-------EIETAAVVTRVSESFVRF 203
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y1908_BURCH (UPF0061 protein Bcen2424_1908 OS=Burkholderia cenocepacia (strain HI2424) GN=Bcen2424_1908 PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 8.825e-42 Identity = 90/170 (52.94%), Postives = 115/170 (67.65%), Query Frame = 3 Query: 27 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 P+A + P +V +S+ VA L+L P +P F F+G A A+PYA Y GHQFG+WAGQLGDGRA+T+GE+ R+ELQLKG G+TPYSR DG AVLRSSIREFLCSEAMH LGIPTTRAL ++ + + V R+ + E A+V RV++SF+RF Sbjct: 41 PAAPLAAPYVVGFSDDVAQLLDLPPSIAAQPGFAELFAGNPTRDWPAHAMPYASVYSGHQFGVWAGQLGDGRALTIGELPGTDGRRYELQLKGGGRTPYSRMGDGRAVLRSSIREFLCSEAMHHLGIPTTRALTVIGSDQPVVRE-------EIETAAVVTRVSESFVRF 203
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y1931_BURCC (UPF0061 protein Bcenmc03_1931 OS=Burkholderia cenocepacia (strain MC0-3) GN=Bcenmc03_1931 PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.153e-41 Identity = 90/170 (52.94%), Postives = 115/170 (67.65%), Query Frame = 3 Query: 27 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 P+A + P +V +S+ VA L+L P +P F F+G A A+PYA Y GHQFG+WAGQLGDGRA+T+GE+ R+ELQLKG G+TPYSR DG AVLRSSIREFLCSEAMH LGIPTTRAL ++ + + V R+ + E A+V RV++SF+RF Sbjct: 41 PAAPLAAPYVVGFSDDVAQLLDLPPAIAAQPGFAELFAGNPTRDWPAHAMPYASVYSGHQFGVWAGQLGDGRALTIGELPGTDGRRYELQLKGGGRTPYSRMGDGRAVLRSSIREFLCSEAMHHLGIPTTRALTVIGSDQPVVRE-------EIETAAVVTRVSESFVRF 203
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: SELO_DANRE (Selenoprotein O OS=Danio rerio GN=selo PE=2 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 1.505e-41 Identity = 93/186 (50.00%), Postives = 122/186 (65.59%), Query Frame = 3 Query: 6 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKE-FERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSE-----------RWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 +C+++V P+ ++NP+ VA S L LD +E + P P + SG+ + G+ P A CY GHQFG +AGQLGDG A LGE+ + RWE+Q+KGAG TPYSR ADG VLRSSIREFLCSEA+ LG+PTTRA +VT+ V RD+FYDGNP+ E ++V R+A SF+RF Sbjct: 70 SCFSRVQPTP-LKNPEFVAVSAPALALLGLDAEEVLKDPLGPEYLSGSKVMPGSEPAAHCYCGHQFGQFAGQLGDGAACYLGEVKAPAGQSPELLRENPTGRWEIQVKGAGLTPYSRQADGRKVLRSSIREFLCSEAVFALGVPTTRAGSVVTSDSRVMRDIFYDGNPRMERCSVVLRIAPSFIRF 254
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y5209_BURS3 (UPF0061 protein Bcep18194_A5209 OS=Burkholderia sp. (strain 383) GN=Bcep18194_A5209 PE=3 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 2.568e-41 Identity = 90/170 (52.94%), Postives = 114/170 (67.06%), Query Frame = 3 Query: 27 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 P+A + P +V +S VA L+L P +P F F+G A A+PYA Y GHQFG+WAGQLGDGRA+T+GE R+ELQLKG+G+TPYSR DG AVLRSSIREFLCSEAMH LGIPTTRAL ++ + + V R+ + E A+V RV++SF+RF Sbjct: 41 PAAPLAAPYVVGFSGEVAQLLDLPPSIAAQPGFAELFAGNPTRDWPANAMPYASVYSGHQFGVWAGQLGDGRALTIGERTGTDGRRYELQLKGSGRTPYSRMGDGRAVLRSSIREFLCSEAMHHLGIPTTRALTVIGSDQPVVRE-------EIETSAVVTRVSESFVRF 203
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y1924_BURPP (UPF0061 protein Bphyt_1924 OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=Bphyt_1924 PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.274e-40 Identity = 93/170 (54.71%), Postives = 113/170 (66.47%), Query Frame = 3 Query: 27 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 P+A + P LV +S A L L+P P F FSG A A+PYA Y GHQFG+WAGQLGDGRA+ LGE+ + +R+ELQLKGAG+TPYSR DG AVLRSSIRE+LCSEAMH LGIPTTRALC++ + + V R+ E A+V RVA SF+RF Sbjct: 41 PAAPLSAPYLVGFSAETAALLGLEPGLENDPGFAELFSGNLTREWPAEALPYASVYSGHQFGVWAGQLGDGRALGLGEVEH-NGQRFELQLKGAGRTPYSRMGDGRAVLRSSIREYLCSEAMHHLGIPTTRALCVIGSDQPVRRETV-------ETAAVVTRVAPSFVRF 202
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y5674_BURM9 (UPF0061 protein BMA10229_A3374 OS=Burkholderia mallei (strain NCTC 10229) GN=BMA10229_A3374 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.664e-40 Identity = 91/177 (51.41%), Postives = 116/177 (65.54%), Query Frame = 3 Query: 6 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 A + P+A + P +V +S+ A L L+P + P F F G ++PYA Y GHQFG+WAGQLGDGRA+T+GE+ + R+ELQLKGAG+TPYSR DG AVLRSSIREFLCSEAMH LGIPTTRAL ++ + + V R+ + E A+V RVAQSF+RF Sbjct: 34 AAFVTRLPAAPLPAPYVVGFSDDAARMLGLEPALRDAPGFAELFCGNPTRDWPQASLPYASVYSGHQFGVWAGQLGDGRALTIGELAH-DGRRYELQLKGAGRTPYSRMGDGRAVLRSSIREFLCSEAMHHLGIPTTRALAVIGSDQPVVRE-------EIETSAVVTRVAQSFVRF 202
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y2457_BURP1 (UPF0061 protein BURPS1710b_2457 OS=Burkholderia pseudomallei (strain 1710b) GN=BURPS1710b_2457 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.664e-40 Identity = 91/177 (51.41%), Postives = 116/177 (65.54%), Query Frame = 3 Query: 6 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL---AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 A + P+A + P +V +S+ A L L+P + P F F G ++PYA Y GHQFG+WAGQLGDGRA+T+GE+ + R+ELQLKGAG+TPYSR DG AVLRSSIREFLCSEAMH LGIPTTRAL ++ + + V R+ + E A+V RVAQSF+RF Sbjct: 34 AAFVTRLPAAPLPAPYVVGFSDDAARMLGLEPALRDAPGFAELFCGNPTRDWPQASLPYASVYSGHQFGVWAGQLGDGRALTIGELAH-DGRRYELQLKGAGRTPYSRMGDGRAVLRSSIREFLCSEAMHHLGIPTTRALAVIGSDQPVVRE-------EIETSAVVTRVAQSFVRF 202 The following BLAST results are available for this feature:
BLAST of CF509848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509848 ID=CF509848; Name=CF509848; organism=Citrus sinensis; type=EST; length=528bpback to top |