CF509848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y1828_CORGB (UPF0061 protein cgR_1828 OS=Corynebacterium glutamicum (strain R) GN=cgR_1828 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.255e-29 Identity = 70/163 (42.94%), Postives = 96/163 (58.90%), Query Frame = 3 Query: 36 EVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLR 524 E NP+LV ++ +A SL LDP P+ F G P AQ Y GHQFG + LGDGRA+ LGE + ++ LKG+G+T +SR ADG AVL +RE++ SEAMH LG+PTTR+L +++TG+ + R PGA++ RVA S +R Sbjct: 27 ESPNPELVILNDDLAYSLGLDPTWLRTPEGVQFLLGRNPEPLTKAVAQAYSGHQFGQFVASLGDGRALLLGEARSADGVLHDIHLKGSGRTQFSRGADGRAVLGPVLREYIISEAMHALGVPTTRSLAVISTGRKIQRG-------SVAPGAVLVRVATSLIR 182
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y1769_VIBF1 (UPF0061 protein VF_1769 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=VF_1769 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.255e-29 Identity = 74/172 (43.02%), Postives = 103/172 (59.88%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 +T V P+ ++N + + W+ +A +L + FSG T + P A Y GHQFG + LGDGR + L EI + K ++L LKGAG TPYSR DG AVLRS+IRE+LCSEAM LGIPTTRAL ++T+ V R+ + E GA++ R+A++ +RF Sbjct: 21 FTYVQPTP-LDNSRWLIWNSELAKQFDLPENVHNHSELLDAFSGETVPSVFSPLAMKYAGHQFGCYNPDLGDGRGLLLAEIKDKKGNSFDLHLKGAGLTPYSRSGDGRAVLRSTIREYLCSEAMAGLGIPTTRALGMMTSDTPVFREGY-------ETGALLIRMAETHIRF 184
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y678_PELUB (UPF0061 protein SAR11_0678 OS=Pelagibacter ubique GN=SAR11_0678 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 3.846e-29 Identity = 73/168 (43.45%), Postives = 102/168 (60.71%), Query Frame = 3 Query: 21 VSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLR 524 ++P A V P+++ ++ +A+ L+LD D FSG G+ AQ Y GHQFG + LGDGRA+ +GE L +ER+++Q KG+G+TP+SR DG AVL +RE++ SEAMHFL IPTTR+L +V TG+ V R+ GAI+ RVA LR Sbjct: 22 INPVA-VNAPEILILNKDLANKLDLDFSNINDDDLSKIFSGNLLPEGSNSIAQAYAGHQFGHFT-MLGDGRAVLIGEHLTKNNERFDIQFKGSGRTPFSRSGDGRAVLGPMLREYIISEAMHFLKIPTTRSLAVVKTGEDVVREQI-------SQGAILTRVALGHLR 180
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y4156_SHEB9 (UPF0061 protein Sbal195_4156 OS=Shewanella baltica (strain OS195) GN=Sbal195_4156 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 3.846e-29 Identity = 75/172 (43.60%), Postives = 102/172 (59.30%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 Y++V P + P+ +AWS+ A + L E L SG T + GA YAQ Y GHQFG + +LGDGR+I LGE + W++ LKG G TPYSR DG AV+RS++REFL SEA+H L +PTTRAL ++ + V R+ +E AI R+A+S +RF Sbjct: 15 YSQVYPQG-ITKPEWLAWSDDAAQLIGLSQPTDE---LLLGLSGNTAVDGATYYAQVYSGHQFGGYTPRLGDGRSIILGEAIGPNGV-WDVALKGGGPTPYSRRGDGRAVMRSAVREFLVSEALHHLHVPTTRALAVIGSDLPVWRE-------SQETAAITVRLARSHIRF 174
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y3154_MYCPA (UPF0061 protein MAP_3154 OS=Mycobacterium paratuberculosis GN=MAP_3154 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 3.846e-29 Identity = 70/158 (44.30%), Postives = 97/158 (61.39%), Query Frame = 3 Query: 51 QLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLR 524 +L+ +E +A L LD PD F +G GA P AQ Y GHQFG + +LGDGRA+ LGE+++ K ++ LKG+G TP++R DGLA + +RE++ SEAMH LG+PTTR+L +V TG+ V R+ PGA++ RVA S LR Sbjct: 35 RLLVLNEPLATQLGLDTGWLRGPDGLRFLTGNLVPTGAAPVAQAYSGHQFGGFVPRLGDGRALLLGELVDNKGRLRDIHLKGSGATPFARGGDGLAAVGPMLREYVVSEAMHALGVPTTRSLAVVGTGRPVYREATL-------PGAVLARVASSHLR 185
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y1236_CLOB6 (UPF0061 protein CLJ_B1236 OS=Clostridium botulinum (strain 657 / Type Ba4) GN=CLJ_B1236 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 3.846e-29 Identity = 75/171 (43.86%), Postives = 105/171 (61.40%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLR 524 +T+ SPS V +P+L + + SL L+ + + D +G A+P AQ Y GHQF + LGDGRA+ LGE + +R+++QLKG+GKTPYSR DG A L +RE++ SEAM+ LGIPTTR+L +VTTG+ + R+ E PGAI+ RVA S +R Sbjct: 26 FTRQSPS-RVPSPKLAVLNYPLITSLGLNAQVLQSADGVDILAGNKIPEEAIPIAQAYAGHQFAHFT-MLGDGRALLLGEHITPLGDRFDIQLKGSGKTPYSRGGDGKAALGPMLREYIISEAMNALGIPTTRSLAVVTTGELIMRE-------AELPGAILTRVAASHIR 187
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y1896_VIBFM (UPF0061 protein VFMJ11_1896 OS=Vibrio fischeri (strain MJ11) GN=VFMJ11_1896 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 5.023e-29 Identity = 73/172 (42.44%), Postives = 102/172 (59.30%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 +T V P+ ++N + + W+ +A +L + FSG + P A Y GHQFG + LGDGR + L EI + K ++L LKGAG TPYSR DG AVLRS+IRE+LCSEAM LGIPTTRAL ++T+ V R+ + E GA++ R+A++ +RF Sbjct: 21 FTYVQPTP-LDNSRWLIWNSELAKQFDLPENVHNHSELLDAFSGEVVPSVFAPLAMKYAGHQFGSYNPDLGDGRGLLLAEIKDKKGNSFDLHLKGAGLTPYSRSGDGRAVLRSTIREYLCSEAMAGLGIPTTRALGMMTSDTPVFREGY-------ETGALLIRMAETHIRF 184
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y926_SILST (UPF0061 protein TM1040_0926 OS=Silicibacter sp. (strain TM1040) GN=TM1040_0926 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 6.560e-29 Identity = 77/171 (45.03%), Postives = 104/171 (60.82%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLR 524 YT+ +P+ V+ P+L+A+++++A L + + F G GA P AQ Y GHQFG + QLGDGRA+ LGE++ R ++QLKG+G TPYSR DG A L +RE++ SEAMH LGIPTTRAL V TG+ V R+ PGA++ RVA S LR Sbjct: 19 YTRQAPTP-VKAPRLLAFNDALATLLGI--ARGTDAELAQVFGGNELPEGADPLAQLYAGHQFGTYNPQLGDGRAVLLGEVVGTDGLRRDIQLKGSGPTPYSRRGDGRAWLGPVLREYVVSEAMHALGIPTTRALAAVETGETVWRE-------GGLPGAVLTRVASSHLR 179
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y4063_SHEB5 (UPF0061 protein Sbal_4063 OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=Sbal_4063 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 8.568e-29 Identity = 74/172 (43.02%), Postives = 102/172 (59.30%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 Y++V P + P+ +AWS+ A + L E L SG + GA YAQ Y GHQFG + +LGDGR+I LGE + + W++ LKG G TPYSR DG AV+RS++REFL SEA+H L +PTTRAL ++ + V R+ +E AI R+A+S +RF Sbjct: 15 YSQVYPQG-ITKPEWLAWSDDAAQLIGLSQPTDE---LLLGLSGNAAVDGATYYAQVYSGHQFGGYTPRLGDGRSIILGEAIG-PNGAWDVALKGGGPTPYSRRGDGRAVMRSAVREFLVSEALHHLHVPTTRALAVIGSDLPVWRE-------SQETAAITVRLARSHIRF 174
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y4038_SHEB8 (UPF0061 protein Shew185_4038 OS=Shewanella baltica (strain OS185) GN=Shew185_4038 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 8.568e-29 Identity = 74/172 (43.02%), Postives = 102/172 (59.30%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 Y++V P + P+ +AWS+ A + L E L SG + GA YAQ Y GHQFG + +LGDGR+I LGE + + W++ LKG G TPYSR DG AV+RS++REFL SEA+H L +PTTRAL ++ + V R+ +E AI R+A+S +RF Sbjct: 15 YSQVYPQG-ITKPEWLAWSDDAAQLIGLSQPTDE---LLLGLSGNAAVDGATYYAQVYSGHQFGGYTPRLGDGRSIILGEAIG-PNGAWDVALKGGGPTPYSRRGDGRAVMRSAVREFLVSEALHHLHVPTTRALAVIGSDLPVWRE-------SQETAAITVRLARSHIRF 174 The following BLAST results are available for this feature:
BLAST of CF509848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF509848 ID=CF509848; Name=CF509848; organism=Citrus sinensis; type=EST; length=528bpback to top |