CF509848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y1931_VIBCH (UPF0061 protein VC_1931 OS=Vibrio cholerae GN=VC_1931 PE=3 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 2.110e-27 Identity = 75/174 (43.10%), Postives = 101/174 (58.05%), Query Frame = 3 Query: 6 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 A YT V P ++N + W+ +A L E + L SG A P A Y GHQFG++ LGDGR + L E+ + E +++ LKGAG TPYSR DG AVLRSS+RE+LCSEAM LGI TTRAL L+++ V R+ +EE GA++ R+A + +RF Sbjct: 19 AFYTPVHPQP-LQNVRWGMWNSRLAQQFGLP--EAPNDELLLSLSGQQLPADFSPVAMKYAGHQFGVYNPDLGDGRGLLLAEMATKQGEVFDIHLKGAGLTPYSRMGDGRAVLRSSLREYLCSEAMAGLGIATTRALALMSSETPVYRE-------REERGALLVRLAHTHVRF 182
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y2210_ALISL (UPF0061 protein VSAL_I2210 OS=Aliivibrio salmonicida (strain LFI1238) GN=VSAL_I2210 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 6.140e-27 Identity = 70/167 (41.92%), Postives = 94/167 (56.29%), Query Frame = 3 Query: 27 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 P + N + W+E +A L + FSG P A Y GHQFG + LGDGR + L EI + +++ LKGAG+TPYSR DG AVLRS+IRE+LCSEAM LGIPTTRAL ++ + V R+ + E GA++ RVA++ +RF Sbjct: 25 PPQPLNNVHWIMWNEKLAKRFNLPLDPAADAELLSGFSGEVVPPQFSPLAMKYAGHQFGSYNPDLGDGRGLLLAEIKDKAGASFDIHLKGAGRTPYSRSGDGRAVLRSTIREYLCSEAMFGLGIPTTRALGMMGSDTPVYREGY-------ETGALLLRVAETHVRF 184
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y3122_SHEDO (UPF0061 protein Sden_3122 OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=Sden_3122 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.047e-26 Identity = 74/171 (43.27%), Postives = 98/171 (57.31%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLR 524 Y P A V +PQL+A + + ++LE D F D SG T +P+A Y GHQFG W+ LGDGRA LG++ E ++QLKG+G TP+SR DG A L + IRE+L SEAM L I TT +L ++ TG+ V R+ Y PGAI+ R A+S LR Sbjct: 26 YRDSLPEAAV-SPQLLALNTRLLETLEQDLAWFNSSDALEQLSGKTYYGSNLPFALAYSGHQFGGWSPVLGDGRAHVLGQLKTAADELIDVQLKGSGATPFSRGGDGRATLGAVIREYLLSEAMAGLNISTTGSLAVIATGEDVWRNGAY-------PGAILVRTAKSHLR 188
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y407_SHEFN (UPF0061 protein Sfri_0407 OS=Shewanella frigidimarina (strain NCIMB 400) GN=Sfri_0407 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.787e-26 Identity = 72/174 (41.38%), Postives = 102/174 (58.62%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLA--GAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 Y++V P + NP + WS+ A + L E+P+ L + A GA YAQ Y GHQFG + +LGDGR+I LGE + + W++ LKG G TPYSR DG AV+RS++REFL SEA+ L +PT+RAL ++ + V R+ +E AI R+A+S +RF Sbjct: 15 YSQVYP-LPISNPHWLGWSDDAAQLIGL-----EKPNAELLMQLSANYAAPGASYYAQVYSGHQFGGYTPRLGDGRSIILGEAIG-PNGAWDVALKGGGPTPYSRQGDGRAVMRSAVREFLVSEALAALNVPTSRALAVIGSDLPVWRE-------SQETAAITVRLAKSHIRF 174
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y2019_THICR (UPF0061 protein Tcr_2019 OS=Thiomicrospira crunogena (strain XCL-2) GN=Tcr_2019 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.047e-26 Identity = 72/176 (40.91%), Postives = 101/176 (57.39%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLA----GAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 Y V P + +N +LV + S+ D L D + + L T + +P AQ Y GHQFG + LGDGR + LG+ + ++ WE LKGAG+TP+SR DG AVLRS IRE+L SEA+H LG+PTTRAL + ++ + V R++F EP A + RV + +RF Sbjct: 14 YELVLPEPQ-QNARLVTVNHSLMDELNCDLSDKQL--LALASGNLTDESLINFNLIPLAQKYTGHQFGYYNPDLGDGRGLLLGQWHDKNNQAWEFHLKGAGRTPFSRRGDGRAVLRSVIREYLASEALHGLGVPTTRALAIASSQEQVQREIF-------EPRASLIRVTPTHIRF 179
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y2651_EXISA (UPF0061 protein EAT1b_2651 OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=EAT1b_2651 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 8.867e-26 Identity = 73/166 (43.98%), Postives = 99/166 (59.64%), Query Frame = 3 Query: 27 PSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLR 524 P V+NP LV +++++A SL LD + ++ L + T + ++Q Y GHQFG LGDGRA+ LGE + +R ++QLKG+G T YSR DG A L +REF+ SEAMH LGIPT RAL ++ TG+ + R PK GAI+ RVA S LR Sbjct: 23 PIHPVDNPTLVLFNDALAASLGLDAQSLKQDIDLLAGNRQTETS----FSQAYAGHQFGNLT-MLGDGRALMLGEHVTPNGKRVDVQLKGSGPTEYSRGGDGRAALGPMVREFIISEAMHALGIPTNRALAVIQTGEAIMRQ-----GPKH--GAILTRVASSHLR 176
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y182_PSEHT (UPF0061 protein PSHAa0182 OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=PSHAa0182 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.580e-25 Identity = 71/164 (43.29%), Postives = 100/164 (60.98%), Query Frame = 3 Query: 33 AEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLR 524 ++V PQL+ W++S+A + ++ R FSG A A A Y GHQFG ++ +LGDGRA LG + + +++ W++QLKG+G TPYSR DG L +IRE++ SEAM LGI TTR L +V +G+ V R NP +PGAIV R+A S +R Sbjct: 21 SKVAAPQLLLWNDSLAKAFNINVVPELRAST---FSGNEQQAIAA-VALGYSGHQFGHFSPRLGDGRAHLLGAVEDAQNQLWDIQLKGSGATPYSRGGDGRCALGPAIREYIMSEAMQALGIKTTRCLAVVGSGETVYR------NP-PQPGAIVTRLASSHIR 173
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: FMP40_YEAST (UPF0061 protein FMP40 OS=Saccharomyces cerevisiae GN=FMP40 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.369e-25 Identity = 64/122 (52.46%), Postives = 83/122 (68.03%), Query Frame = 3 Query: 168 PYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWE-LQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRA--LCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLR 524 PY+ Y G QFG +A QLGDGR + L ++ + S +W+ QLKGAG TP+SRFADG AVLRSSIREF+ SEA+H +GIP+TRA L L+ K R+ +EP A+VCR A S++R Sbjct: 114 PYSTVYSGFQFGSFAAQLGDGRVVNLFDLKDKCSGQWQTFQLKGAGMTPFSRFADGKAVLRSSIREFIMSEALHSIGIPSTRAMQLTLLPGTKAQRRN--------QEPCAVVCRFAPSWIR 227
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y2120_MARMS (UPF0061 protein Mmwyl1_2120 OS=Marinomonas sp. (strain MWYL1) GN=Mmwyl1_2120 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 5.747e-25 Identity = 75/177 (42.37%), Postives = 102/177 (57.63%), Query Frame = 3 Query: 3 HACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYA--QCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 HA +K +E +LV +++S+A L +D K E SG A+PY+ Y GHQFG ++ QLGDGR + LGE+ ++L +KGAG TPYSR DG AVLRS IRE+L SEAM L +P++RAL L + +R+ Y P E GA++ RVAQ +RF Sbjct: 12 HAFSSKTHVQPLIEQ-RLVEFNQSLASFLSIDIKSTETK---CILSGEE----ALPYSLSMVYAGHQFGGFSPQLGDGRGVLLGEVRGQDGLLYDLHMKGAGPTPYSRRGDGRAVLRSCIREYLASEAMTALSVPSSRALAL-----YDSREAVYRETP--EAGAMLLRVAQGHIRF 173
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: YU61_VIBMA (UPF0061 protein ORF18 OS=Vibrio marinus PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 9.175e-23 Identity = 78/194 (40.21%), Postives = 105/194 (54.12%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGA------VPYAQCYGGHQFGMWAGQ---------LGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCL-VTTGKFVTRDMFYDGNPKEEPG-------AIVCRVAQSFLR 524 Y V P+ +++P+ VA S+++ L E DF FSG ++G V +A Y +G Q GDGRAI++ E L +K +RWE+QLKG G+TPY R ADG AVLRSSIREFL + MH LG+PT+R+L L V+ + V R + G+ E P AI RVA SF+R Sbjct: 19 YVPVKPTP-IKDPEYVAHSKNLFSELGFADSMAESADFVRMFSG--DMSGVPVPMRQVGWASGYALSIYGTEYTQQCPFQTGNGYGDGRAISVLETL-IKGQRWEMQLKGGGRTPYCRGADGRAVLRSSIREFLAQDHMHALGVPTSRSLSLYVSKTETVKRPWYSQGSRSENPDMLISEAVAISTRVAPSFIR 208 The following BLAST results are available for this feature:
BLAST of CF509848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509848 ID=CF509848; Name=CF509848; organism=Citrus sinensis; type=EST; length=528bpback to top |