CF509848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y1019_THIDA (UPF0061 protein Tbd_1019 OS=Thiobacillus denitrificans (strain ATCC 25259) GN=Tbd_1019 PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 5.920e-38 Identity = 90/172 (52.33%), Postives = 108/172 (62.79%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 Y +V P+ V +P LV +S L+LD E +RP+ +G L G A Y GHQFG + QLGDGRAI LGE+ N E WE+QLKGAG+TPYSR DG AVLRSSIREFLCSEAMH L IPTTRAL +V + V R+ EE A+V R+A SF+RF Sbjct: 21 YARVCPTP-VPDPYLVCYSPEALSLLDLDATELKRPETIETLAGNRLLPGMDAIAALYAGHQFGHYVPQLGDGRAILLGEVRNRAGEGWEIQLKGAGRTPYSRGGDGRAVLRSSIREFLCSEAMHALDIPTTRALAVVGSDHPVYRE-------DEETAALVTRLAPSFVRF 184
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y486_PSEF5 (UPF0061 protein PFL_0486 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=PFL_0486 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.010e-37 Identity = 85/163 (52.15%), Postives = 105/163 (64.42%), Query Frame = 3 Query: 39 VENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 ++NP+LVA S L+LDP E P F F G A A P A Y GHQFG + QLGDGR + LGE+ N E W+L LKGAG+TPYSR DG AVLRSSIREFL SEA+H LGIP++RALC++ + V R+ K+E GA+V R+A S +RF Sbjct: 29 LDNPRLVAASPGAMALLDLDPAVAETPVFAELFGGHKLWAEAEPRAMVYSGHQFGSYNPQLGDGRGLLLGEVYNQAGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLASEALHALGIPSSRALCVIGSDTPVWRE-------KQERGAMVLRLAPSHVRF 184
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y2935_VARPS (UPF0061 protein Vapar_2935 OS=Variovorax paradoxus (strain S110) GN=Vapar_2935 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.010e-37 Identity = 93/175 (53.14%), Postives = 114/175 (65.14%), Query Frame = 3 Query: 6 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLF-FSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 A T++ P+ + P V SE+ A L L P ++ + + L +G P+AG +P+A Y GHQFG+WAGQLGDGRAI LGE E+QLKGAG+TPYSR ADG AVLRSSIREFLCSEAMH LGIPTTRALC+ + V R+M E A+V RVA SF+RF Sbjct: 27 AFLTELRPTPLPDPPYWVGHSEAAARLLGL-PADWRQSEGTLAALTGNLPVAGTLPFATVYSGHQFGVWAGQLGDGRAIMLGET----EGGLEVQLKGAGRTPYSRGADGRAVLRSSIREFLCSEAMHGLGIPTTRALCVTGSDARVYREM-------PETAAVVTRVAPSFIRF 189
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y3881_PSEU5 (UPF0061 protein PST_3881 OS=Pseudomonas stutzeri (strain A1501) GN=PST_3881 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 2.938e-37 Identity = 87/171 (50.88%), Postives = 110/171 (64.33%), Query Frame = 3 Query: 15 TKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 T+VSP +E P+LV SE+ L+LDP E E+ F FSG + A P A Y GHQFG + QLGDGR + LGE++N E W+L LKGAGKTPYSR DG AVLRSSIREFL SE +H LGIP++RALC+ + V R+ + E GA++ R+A S +RF Sbjct: 22 TQVSPQP-LEAPRLVVASEAAMALLDLDPAEAEQALFAELFSGHKIWSTAEPRAMVYSGHQFGSYNPQLGDGRGLLLGEVVNEAGEYWDLHLKGAGKTPYSRMGDGRAVLRSSIREFLASEHLHALGIPSSRALCVTGSDTLVYRE-------RPERGAMLLRLAPSHVRF 184
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y2107_BORBR (UPF0061 protein BB2107 OS=Bordetella bronchiseptica GN=BB2107 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 3.837e-37 Identity = 89/172 (51.74%), Postives = 106/172 (61.63%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 YT++ P P+L+ + A + LDP EF F FSG PL G A Y GHQFG+WAGQLGDGRA LGE+ + WELQLKGAG TPYSR DG AVLRSS+RE+L SEAMH LGIPTTR+L LV + V R+ E A+V R+A SF+RF Sbjct: 23 YTRLQPRPPAA-PRLLHANAEAAALIGLDPAEFSTQAFLDVFSGHAPLPGGDTLAAVYSGHQFGVWAGQLGDGRAHLLGEVRG-PAGGWELQLKGAGMTPYSRMGDGRAVLRSSVREYLASEAMHGLGIPTTRSLALVVSDDPVMRETV-------ETAAVVTRMAPSFVRF 185
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y1919_BORPA (UPF0061 protein BPP1919 OS=Bordetella parapertussis GN=BPP1919 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 3.837e-37 Identity = 89/172 (51.74%), Postives = 106/172 (61.63%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 YT++ P P+L+ + A + LDP EF F FSG PL G A Y GHQFG+WAGQLGDGRA LGE+ + WELQLKGAG TPYSR DG AVLRSS+RE+L SEAMH LGIPTTR+L LV + V R+ E A+V R+A SF+RF Sbjct: 23 YTRLQPRPPAA-PRLLHANAEAAALIGLDPAEFSTQAFLDVFSGHAPLPGGDTLAAVYSGHQFGVWAGQLGDGRAHLLGEVRG-PAGGWELQLKGAGMTPYSRMGDGRAVLRSSVREYLASEAMHGLGIPTTRSLALVVSDDPVMRETV-------ETAAVVTRMAPSFVRF 185
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y5028_PSESM (UPF0061 protein PSPTO_5028 OS=Pseudomonas syringae pv. tomato GN=PSPTO_5028 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 5.011e-37 Identity = 84/163 (51.53%), Postives = 107/163 (65.64%), Query Frame = 3 Query: 39 VENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 ++ P+LV SES L+L P++ E P F FSG A A P A Y GHQFG + +LGDGR + LGE+ N E W+L LKGAG+TPYSR DG AVLRSSIREFL SEA+H LGIP++RA C+V++ V R+ K+E A+V R+AQS +RF Sbjct: 29 IDAPRLVVASESALALLDLAPEQSELPLFAEIFSGHKLWAEAEPRAMVYSGHQFGSYNPRLGDGRGLLLGEVYNDAGEHWDLHLKGAGRTPYSRMGDGRAVLRSSIREFLASEALHALGIPSSRAACVVSSNTPVWRE-------KQEYAAMVLRLAQSHVRF 184
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y558_PSEMY (UPF0061 protein Pmen_0558 OS=Pseudomonas mendocina (strain ymp) GN=Pmen_0558 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 6.545e-37 Identity = 84/171 (49.12%), Postives = 108/171 (63.16%), Query Frame = 3 Query: 15 TKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 T+V P +E P+LV S L+LDP E +R +F F+G A P A Y GHQFG + +LGDGR + LGE++N E W+L LKGAG+TPYSR DG AVLRSSIREFL SE +H LGIP++RALC+ T+ V R+ K+E A+V R+A S +RF Sbjct: 22 TEVLPEP-IEQPRLVVASSDAMALLDLDPAEAQREEFAELFAGHKLWGEAEPRAMVYSGHQFGGYTPRLGDGRGLLLGEVVNAAGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLASEHLHALGIPSSRALCVTTSDTPVWRE-------KQERAAMVLRLAPSHVRF 184
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y4511_AZOVD (UPF0061 protein Avin_45110 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=Avin_45110 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.904e-36 Identity = 83/171 (48.54%), Postives = 106/171 (61.99%), Query Frame = 3 Query: 15 TKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 T V+P + +P+LV S + L+L+P + P + +G P GA P A Y GHQFG + QLGDGR + LGE++N ERW+L LKGAGKTPYSR DG AVLRSSIREFL SE +H LGIPT+RALC+ + V R+ EE A + R+A S +RF Sbjct: 22 TAVTP-LPIASPRLVVASPAALALLDLEPAVADDPQLVEYCAGQCPWPGAEPRAMAYSGHQFGFYNPQLGDGRGLLLGEVINAAGERWDLHLKGAGKTPYSRMGDGRAVLRSSIREFLASEHLHALGIPTSRALCVTASDTPVWRE-------TEERAATLLRLAPSHVRF 184
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y444_PSEFS (UPF0061 protein PFLU_0444 OS=Pseudomonas fluorescens (strain SBW25) GN=PFLU_0444 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.904e-36 Identity = 83/163 (50.92%), Postives = 103/163 (63.19%), Query Frame = 3 Query: 39 VENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 ++ P+LV S + L+LDP E P F F G A A P A Y GHQFG + QLGDGR + LGE+ N E W+L LKGAG TPYSR DG AVLRSSIREFL SEA+H LGIP++RALC++ + V R+ K+E GA+V R+A S +RF Sbjct: 29 LDAPRLVVASPAAMALLDLDPSVAETPVFAELFGGHKLWAEAEPRAMVYSGHQFGGYTPQLGDGRGLLLGEVYNEAGEHWDLHLKGAGMTPYSRMGDGRAVLRSSIREFLASEALHALGIPSSRALCVIGSDTPVWRE-------KQERGAMVLRMAHSHIRF 184 The following BLAST results are available for this feature:
BLAST of CF509848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509848 ID=CF509848; Name=CF509848; organism=Citrus sinensis; type=EST; length=528bpback to top |