CF509848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y5118_PSEPG (UPF0061 protein PputGB1_5118 OS=Pseudomonas putida (strain GB-1) GN=PputGB1_5118 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.487e-36 Identity = 87/171 (50.88%), Postives = 106/171 (61.99%), Query Frame = 3 Query: 15 TKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 T+V P E P+LV SES L+LDP E P F FSG A P A Y GHQFG + +LGDGR + L E+LN E W+L LKGAG+TPYSR DG AVLRSSIREFL SEA+H LGIPT+RALC++ + V R+ E A++ R+AQS +RF Sbjct: 22 TQVLPEPIAE-PRLVVASESAMALLDLDPAHAELPVFAELFSGHKLWEEADPRAMVYSGHQFGSYNPRLGDGRGLLLAEVLNDAGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLASEALHALGIPTSRALCVIGSSTPVWRE-------TRESAAMLTRLAQSHVRF 184
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y1735_HERAR (UPF0061 protein HEAR1735 OS=Herminiimonas arsenicoxydans GN=HEAR1735 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.487e-36 Identity = 90/177 (50.85%), Postives = 111/177 (62.71%), Query Frame = 3 Query: 6 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEI---LNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 A YT + P+ + P LV S S A + LD + + F F+G G+ P + Y GHQFG+WAGQLGDGRAI LG++ + S R ELQLKGAG TPYSR DG AVLRSSIREFLCSEAM LGIPTTRALC+ + + V R+ + E A+ R+AQSF+RF Sbjct: 27 AHYTALMPTP-LPAPYLVCASASAAALIGLDFSDIDSAAFIETFTGNRIPDGSRPLSAVYSGHQFGVWAGQLGDGRAILLGDVPAPTMIPSGRLELQLKGAGLTPYSRMGDGRAVLRSSIREFLCSEAMAALGIPTTRALCVTGSDQIVLRE-------QRETAAVATRMAQSFVRF 195
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y3040_BORPD (UPF0061 protein Bpet3040 OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=Bpet3040 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 4.242e-36 Identity = 87/174 (50.00%), Postives = 106/174 (60.92%), Query Frame = 3 Query: 6 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 A YT+++P + P+L+ +E A + L +F FSG PL G A Y GHQFG+WAGQLGDGRA LGE+ WELQLKGAG TPYSR DG AVLRSS+RE+L SEAMH LGIPTTR+L LV + V R+ E AIV R++ SF+RF Sbjct: 21 AFYTRLAPQP-LTAPRLLHANEQAAALIGLSADALRSDEFLRVFSGQQPLPGGQTLAAVYSGHQFGVWAGQLGDGRAHLLGEVAG-PDGNWELQLKGAGMTPYSRMGDGRAVLRSSVREYLASEAMHGLGIPTTRSLALVVSDDPVMRETV-------ETAAIVTRMSPSFVRF 185
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: YE35_SCHPO (UPF0061 protein C20G4.05c OS=Schizosaccharomyces pombe GN=SPAC20G4.05c PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 7.236e-36 Identity = 84/173 (48.55%), Postives = 116/173 (67.05%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGAT-PLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKS-ERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLR 524 +T ++PS + N QL+A+S S SL L+ E + F G+ + P+AQCYGG+QFG WAGQLGDGR ++L E+ N ++ +R+E+Q+KGAG+TPYSRFADG AVLRSSIRE+LC EA++ LGIPTT+AL + V + EP A+VCR+A S++R Sbjct: 50 FTYLTPSLKA-NSQLLAYSPSSVKSLGLEESETQTEAFQQLVVGSNVDVNKCCPWAQCYGGYQFGDWAGQLGDGRVVSLCELTNPETGKRFEIQVKGAGRTPYSRFADGKAVLRSSIREYLCCEALYALGIPTTQALAISNLEGVVAQ------RETVEPCAVVCRMAPSWIR 215
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y5068_PSEPK (UPF0061 protein PP_5068 OS=Pseudomonas putida (strain KT2440) GN=PP_5068 PE=3 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 9.451e-36 Identity = 85/171 (49.71%), Postives = 107/171 (62.57%), Query Frame = 3 Query: 15 TKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 T+V P + +P+LV SES L+LDP + E P F FSG A P A Y GHQFG + +LGDGR + L E+LN E W+L LKGAG+TPYSR DG AVLRSSIREFL SEA+H LGI T+RALC++ + V R+ E A++ R+AQS +RF Sbjct: 22 TQVLPEP-IADPRLVVASESAMALLDLDPAQAELPVFAELFSGHKLWEEADPRAMVYSGHQFGSYNPRLGDGRGLLLAEVLNDAGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLASEALHALGIATSRALCVIGSSTPVWRE-------TRESAAMLTRLAQSHVRF 184
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y3959_PSEA6 (UPF0061 protein Patl_3959 OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=Patl_3959 PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 9.451e-36 Identity = 79/163 (48.47%), Postives = 105/163 (64.42%), Query Frame = 3 Query: 39 VENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 V NPQLV + ++ D+L+L F + G T +AQ YGGHQFG W LGDGR + LGE + + W+L LKGAG TPYSRFADG AVLRS++RE+L SEA+H +GIPT+RALCL+T+ + V R+ K+E A++ RV+QS +RF Sbjct: 23 VANPQLVEVNHTLRDALQLPASWFTQSSIMSMLFGNTSSFTTHSFAQKYGGHQFGGWNPDLGDGRGVLLGEAKDKFGKSWDLHLKGAGPTPYSRFADGRAVLRSTLREYLASEALHHMGIPTSRALCLITSDEPVYRE-------KQEKAAMMIRVSQSHIRF 178
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: YDIU_SALTY (UPF0061 protein ydiU OS=Salmonella typhimurium GN=ydiU PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.234e-35 Identity = 84/174 (48.28%), Postives = 110/174 (63.22%), Query Frame = 3 Query: 6 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL +VT+ V R+ +E GA++ R+AQS +RF Sbjct: 15 ATYTALLPTP-LKNARLIWYNDELAQQLAIPASLFDATNGAGVWGGETLLPGMSPVAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDTPVQRE-------TQETGAMLMRLAQSHMRF 180
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: YDIU_SALPK (UPF0061 protein ydiU OS=Salmonella paratyphi A (strain AKU_12601) GN=ydiU PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.234e-35 Identity = 84/174 (48.28%), Postives = 110/174 (63.22%), Query Frame = 3 Query: 6 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL +VT+ V R+ +E GA++ R+AQS +RF Sbjct: 15 ATYTALLPTP-LKNARLIWYNDELAQQLAIPASLFDATNGAGVWGGETLLPGMSPVAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDTPVQRE-------TQETGAMLMRLAQSHMRF 180
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: YDIU_SALPA (UPF0061 protein ydiU OS=Salmonella paratyphi A GN=ydiU PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.234e-35 Identity = 84/174 (48.28%), Postives = 110/174 (63.22%), Query Frame = 3 Query: 6 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL +VT+ V R+ +E GA++ R+AQS +RF Sbjct: 15 ATYTALLPTP-LKNARLIWYNDELAQQLAIPASLFDATNGAGVWGGETLLPGMSPVAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDTPVQRE-------TQETGAMLMRLAQSHMRF 180
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y4941_PSEP1 (UPF0061 protein Pput_4941 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=Pput_4941 PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.234e-35 Identity = 85/171 (49.71%), Postives = 107/171 (62.57%), Query Frame = 3 Query: 15 TKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 T+V P + +P+LV SES L+LDP + E P F FSG A P A Y GHQFG + +LGDGR + L E+LN E W+L LKGAG+TPYSR DG AVLRSSIREFL SEA+H LGI T+RALC++ + V R+ E A++ R+AQS +RF Sbjct: 22 TQVLPEP-IADPRLVVASESAMALLDLDPAQAELPVFAELFSGHKLWEEADPRAMVYSGHQFGSYNPRLGDGRGLLLAEVLNDVGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLASEALHALGIATSRALCVIGSSTPVWRE-------TRESAAMLTRLAQSHVRF 184 The following BLAST results are available for this feature:
BLAST of CF509848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509848 ID=CF509848; Name=CF509848; organism=Citrus sinensis; type=EST; length=528bpback to top |