CF509848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: YDIU_SALDC (UPF0061 protein ydiU OS=Salmonella dublin (strain CT_02021853) GN=ydiU PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 4.691e-35 Identity = 83/174 (47.70%), Postives = 109/174 (62.64%), Query Frame = 3 Query: 6 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL +V + V R+ +E GA++ R+AQS +RF Sbjct: 15 ATYTALLPTP-LKNARLIWYNDKLAQQLAIPASLFDATNGAGVWGGETLLPGMSPVAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVASDTPVQRE-------TQETGAMLMRLAQSHMRF 180
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: YDIU_SALA4 (UPF0061 protein ydiU OS=Salmonella agona (strain SL483) GN=ydiU PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 4.691e-35 Identity = 83/174 (47.70%), Postives = 109/174 (62.64%), Query Frame = 3 Query: 6 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL +V + V R+ +E GA++ R+AQS +RF Sbjct: 15 ATYTALLPTP-LKNARLIWYNDELAQQLAIPASLFDATNGAGVWGGETLLPGMSPVAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVASDTPVQRE-------TQETGAMLMRLAQSHMRF 180
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: YDIU_SALEP (UPF0061 protein ydiU OS=Salmonella enteritidis PT4 (strain P125109) GN=ydiU PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 6.126e-35 Identity = 83/174 (47.70%), Postives = 109/174 (62.64%), Query Frame = 3 Query: 6 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL +V + V R+ +E GA++ R+AQS +RF Sbjct: 15 ATYTALLPTP-LKNARLIWYNDKLAQQLAIPASLFDATNGAGVWGGETLLPGMSPVAQVYSGHQFGVWAGQLGDGRGILLGEQLLAYGSTLDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVASDTPVQRE-------TQETGAMLMRLAQSHMRF 180
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y1192_THISH (UPF0061 protein Tgr7_1192 OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=Tgr7_1192 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 6.126e-35 Identity = 80/165 (48.48%), Postives = 105/165 (63.64%), Query Frame = 3 Query: 33 AEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 A P VA++E A + L P+E R +F F+G PL G P + Y GHQFG++ QLGDGRA+ LGE+ + RWELQLKG+G T +SR ADG AVLRS+IRE+L SEAMH LG+PTTRAL ++ + V R+ + E AI+ R+A S +RF Sbjct: 27 APFPQPYRVAFNEKAAALIGLHPEEASRAEFVNAFTGQIPLTGMEPVSMIYAGHQFGVYVPQLGDGRALVLGEVQTPEGARWELQLKGSGPTRFSRGADGRAVLRSTIREYLASEAMHALGVPTTRALTILGSDMPVYRE-------RVETAAILVRMAPSHVRF 184
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: YDIU_SALSV (UPF0061 protein ydiU OS=Salmonella schwarzengrund (strain CVM19633) GN=ydiU PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 8.001e-35 Identity = 83/174 (47.70%), Postives = 109/174 (62.64%), Query Frame = 3 Query: 6 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL +V + V R+ +E GA++ R+AQS +RF Sbjct: 15 ATYTALLPTP-LKNARLIWYNDELAQQLAIPASLFDVTNGAGVWGGETLLPGMSPVAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVASDTPVQRE-------TQETGAMLMRLAQSHMRF 180
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: YDIU_SALPC (UPF0061 protein ydiU OS=Salmonella paratyphi C (strain RKS4594) GN=ydiU PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 8.001e-35 Identity = 83/174 (47.70%), Postives = 109/174 (62.64%), Query Frame = 3 Query: 6 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL +V + V R+ +E GA++ R+AQS +RF Sbjct: 15 ATYTALLPTL-LKNARLIWYNDKLAQQLAIPASLFDVTNGAGVWGGETLLPGMSPVAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVASDTPVQRE-------TQETGAMLMRLAQSHMRF 180
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: YDIU_ECO55 (UPF0061 protein ydiU OS=Escherichia coli (strain 55989 / EAEC) GN=ydiU PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 8.001e-35 Identity = 87/174 (50.00%), Postives = 108/174 (62.07%), Query Frame = 3 Query: 6 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 A YT +SP+ + N +L+ + +A++L + F+ + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL +VT+ V R+ EPGA++ RVA S LRF Sbjct: 15 ATYTALSPTP-LNNARLIWHNTELANTLSIPSSLFKNGAG--VWGGETLLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETV-------EPGAMLMRVAPSHLRF 178
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: YDIU_ECO24 (UPF0061 protein ydiU OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=ydiU PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 8.001e-35 Identity = 87/174 (50.00%), Postives = 108/174 (62.07%), Query Frame = 3 Query: 6 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 A YT +SP+ + N +L+ + +A++L + F+ + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL +VT+ V R+ EPGA++ RVA S LRF Sbjct: 15 ATYTALSPTP-LNNARLIWHNTELANTLSIPSSLFKNGAG--VWGGETLLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETV-------EPGAMLMRVAPSHLRF 178
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y444_PSEPF (UPF0061 protein Pfl01_0444 OS=Pseudomonas fluorescens (strain Pf0-1) GN=Pfl01_0444 PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 8.001e-35 Identity = 78/163 (47.85%), Postives = 102/163 (62.58%), Query Frame = 3 Query: 39 VENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 ++NP+LV S + L+LDP + +F F G A A P A Y GHQFG + QLGDGR + LGE+ N E W+L LKGAG+TP+SR DG AVLRSSIREFL SEA+H L IP++RA C++ + V R+ K+E A+V R+A S +RF Sbjct: 29 IDNPRLVVASPAALALLDLDPAMADTQEFAELFGGHKLWADAEPRAMVYSGHQFGGYTPQLGDGRGLLLGEVYNAAGEHWDLHLKGAGQTPFSRMGDGRAVLRSSIREFLASEALHALNIPSSRAACVIGSDTPVWRE-------KQERAAMVLRLAPSHIRF 184
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y2395_RHOFD (UPF0061 protein Rfer_2395 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=Rfer_2395 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.045e-34 Identity = 87/172 (50.58%), Postives = 103/172 (59.88%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 YT ++P + P V S S A L L + P+ +G P+AG P A Y GHQFG WAGQLGDGRAI LGE L E+QLKG+G TPYSR DG AVLRSSIREFLCSEAM LGI T+RALC+V + + R+ E A+V RVA SF+RF Sbjct: 29 YTPLAPWP-LPAPYWVGRSTSTARELGLSESWLDSPELLQVLTGNQPMAGTQPLASVYSGHQFGQWAGQLGDGRAILLGETGGL-----EVQLKGSGLTPYSRMGDGRAVLRSSIREFLCSEAMQGLGIATSRALCVVGSDAPIRRETV-------ETAAVVTRVAPSFIRF 187 The following BLAST results are available for this feature:
BLAST of CF509848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509848 ID=CF509848; Name=CF509848; organism=Citrus sinensis; type=EST; length=528bpback to top |