CF509848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: YDIU_ECOSE (UPF0061 protein ydiU OS=Escherichia coli (strain SE11) GN=ydiU PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.365e-34 Identity = 86/172 (50.00%), Postives = 107/172 (62.21%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 YT +SP+ + N +L+ + +A++L + F+ + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL +VT+ V R+ EPGA++ RVA S LRF Sbjct: 17 YTALSPTP-LNNARLIWHNTELANTLSIPSSLFKNAAG--VWGGETLLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETV-------EPGAMLIRVAPSHLRF 178
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y5402_METPB (UPF0061 protein Mpop_5402 OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=Mpop_5402 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.365e-34 Identity = 83/171 (48.54%), Postives = 106/171 (61.99%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLR 524 + +V+P+A VE P+LV + ++A L LDP E P+ SG GA P A Y GHQFG + QLGDGRAI LGE++ R ++QLKG+G TP+SR DG A L +RE+L SEAMH LGIPTTRAL VTTG+ V R+ PGA++ RVA S +R Sbjct: 19 FARVAPTA-VEAPRLVRLNRTLALDLGLDPDRLESPEGLDVLSGRRVAEGAEPLAAAYAGHQFGQFVPQLGDGRAILLGEVVGRDGRRRDIQLKGSGPTPFSRRGDGRAALGPVLREYLVSEAMHALGIPTTRALAAVTTGEPVIRETVL-------PGAVLTRVASSHIR 181
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y2581_POLSJ (UPF0061 protein Bpro_2581 OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=Bpro_2581 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.365e-34 Identity = 85/172 (49.42%), Postives = 108/172 (62.79%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 YT++ P+ + +P V S+++A L L+ E + +G AG+ P A Y GHQFG+WAGQLGDGRAI LG+ L + E+QLKGAG+TPYSR DG AVLRSSIREFL SEAMH LGIPTTRALC+ + V R+ E A+V R + SF+RF Sbjct: 33 YTELQPTP-LPSPYWVGRSQALARELGLEDHWLESAEALEVLTGNRSTAGSRPLASVYSGHQFGVWAGQLGDGRAILLGD-LQTPAGPQEIQLKGAGRTPYSRMGDGRAVLRSSIREFLASEAMHGLGIPTTRALCVTGSDAPVRREDI-------ETAAVVTRTSPSFIRF 195
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: YDIU_ECO5E (UPF0061 protein ydiU OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=ydiU PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.782e-34 Identity = 86/172 (50.00%), Postives = 107/172 (62.21%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 YT +SP+ + N +L+ + +A++L + F+ + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL +VT+ V R+ EPGA++ RVA S LRF Sbjct: 17 YTALSPTP-LNNARLIWHNTELANTLSIPSSLFKNGAG--VWGGETLLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETV-------EPGAMLMRVAPSHLRF 178
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: YDIU_ECO57 (UPF0061 protein ydiU OS=Escherichia coli O157:H7 GN=ydiU PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.782e-34 Identity = 86/172 (50.00%), Postives = 107/172 (62.21%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 YT +SP+ + N +L+ + +A++L + F+ + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL +VT+ V R+ EPGA++ RVA S LRF Sbjct: 17 YTALSPTP-LNNARLIWHNTELANTLSIPSSLFKNGAG--VWGGETLLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETV-------EPGAMLMRVAPSHLRF 178
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y2463_PECCP (UPF0061 protein PC1_2463 OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=PC1_2463 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.782e-34 Identity = 88/172 (51.16%), Postives = 104/172 (60.47%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 YT + P + +L+ SE +A L L F P+ +SG L G P AQ Y GHQFGMWAGQLGDGR I LGE + LKGAG TPYSR DG AVLRS IREFL SEAMH LGIPTTRAL +VT+ V R+ +EE GA++ RVA+S +RF Sbjct: 19 YTALQPKP-LHGARLLYHSEGLAAELGLSSDWFT-PEQDAVWSGERLLPGMEPLAQVYSGHQFGMWAGQLGDGRGILLGEQQLADGRSMDWHLKGAGLTPYSRMGDGRAVLRSVIREFLASEAMHHLGIPTTRALTIVTSTHPVQRE-------QEEKGAMLMRVAESHVRF 181
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y863_MYXXD (UPF0061 protein MXAN_0863 OS=Myxococcus xanthus (strain DK 1622) GN=MXAN_0863 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.328e-34 Identity = 78/170 (45.88%), Postives = 108/170 (63.53%), Query Frame = 3 Query: 18 KVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 +V PS + +LV+ + + L+L P+E +RP+F GA PL G P+A Y GHQFG++ +LGDGRA+ LGE+ + +W+L LKG G TP+SR DG AVLRS+IRE+LC EAMH LGIPTTR L ++ + V R+ E GA++ R+A S +RF Sbjct: 23 RVHPSP-FPDAKLVSVNPAALKLLDLTPEEAQRPEFVAAMGGAKPLPGMEPFAMVYAGHQFGVYVPRLGDGRALLLGEVRDAAGAKWDLHLKGGGPTPFSRGGDGRAVLRSTIREYLCGEAMHGLGIPTTRGLGILGSQAPVYREAV-------ETGAMLVRMAPSHVRF 184
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y1842_ERWCT (UPF0061 protein ECA1842 OS=Erwinia carotovora subsp. atroseptica GN=ECA1842 PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.040e-34 Identity = 87/172 (50.58%), Postives = 105/172 (61.05%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 YT + P+ + +L+ SE +A L L F P+ +SG L G P AQ Y GHQFG WAGQLGDGR I LGE + LKGAG TPYSR DG AVLRS+IREFL SEAMH LGIPTTRAL +VT+ V R+ +EE GA++ RVA+S +RF Sbjct: 19 YTALQPTP-LHGARLLYHSEGLASELGLSSDWFT-PEQDDVWSGTRLLPGMEPLAQVYSGHQFGSWAGQLGDGRGILLGEQQLADGRSMDWHLKGAGLTPYSRMGDGRAVLRSAIREFLASEAMHHLGIPTTRALTIVTSQHPVQRE-------QEEKGAMLLRVAESHVRF 181
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: Y2105_ENTS8 (UPF0061 protein ESA_02105 OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=ESA_02105 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 3.971e-34 Identity = 83/172 (48.26%), Postives = 108/172 (62.79%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 YT+++P+ + N +L+ + +A +LEL F+ + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE + + LKGAG TPYSR DG AVLRS++REFL SEAMH LGIPTTRAL +VT+ V R+ E GA++ R+A+S +RF Sbjct: 19 YTELTPTP-LNNSRLLCHNAPLAQALELPETLFDYQGPAGVWGGETLLPGMAPLAQVYSGHQFGVWAGQLGDGRGILLGEQQLSDGCKLDWHLKGAGLTPYSRMGDGRAVLRSTVREFLASEAMHGLGIPTTRALTIVTSDTPVRRE-------TTERGAMLMRIAESHVRF 182
BLAST of CF509848 vs. ExPASy Swiss-Prot
Match: YDIU_SHIB3 (UPF0061 protein ydiU OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=ydiU PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 5.186e-34 Identity = 86/172 (50.00%), Postives = 106/172 (61.63%), Query Frame = 3 Query: 12 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQSFLRF 527 YT +SP+ + N +LV + +A++L + F+ + G L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL +VT+ V R+ EPGA++ RVA S LRF Sbjct: 17 YTALSPTP-LNNARLVWHNTELANTLSIPSSLFKNGAG--VWGGEALLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE-------TAEPGAMLMRVAPSHLRF 178 The following BLAST results are available for this feature:
BLAST of CF509848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509848 ID=CF509848; Name=CF509848; organism=Citrus sinensis; type=EST; length=528bpback to top |