CF509902

Overview
NameCF509902
Unique NameCF509902
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length448
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509902 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.540e-31
Identity = 67/105 (63.81%), Postives = 77/105 (73.33%), Query Frame = 2
Query:  134 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLS 448
            ITNKVYFD+E  GKP GRIVMGL+GK VPKTAENFRAL TG+   G+      Y+GS+FHRII +FM+Q            +SIYG KFPDENFKLKHTGPG+LS
Sbjct:   43 ITNKVYFDIEHGGKPLGRIVMGLYGKTVPKTAENFRALATGKNSDGED-LGYGYEGSSFHRIIKNFMIQGGDFTKGDGTGGKSIYGSKFPDENFKLKHTGPGVLS 146          
BLAST of CF509902 vs. ExPASy Swiss-Prot
Match: PPID_EMENI (Peptidyl-prolyl cis-trans isomerase D OS=Emericella nidulans GN=cpr6 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 4.623e-31
Identity = 63/102 (61.76%), Postives = 73/102 (71.57%), Query Frame = 2
Query:  143 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLS 448
            +V+FD++I  +  GRI   LF   VPKTAENFRALCTGEKG+GK GKPLH+KGS FHR+I  FM+Q            ESIYGEKFPDENF+LKH  P LLS
Sbjct:    8 RVFFDIQIGQQQTGRIAFELFNDVVPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFELKHDRPFLLS 109          
BLAST of CF509902 vs. ExPASy Swiss-Prot
Match: CP20C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 6.038e-31
Identity = 68/106 (64.15%), Postives = 75/106 (70.75%), Query Frame = 2
Query:  131 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLS 448
            ++TNKVYFDVEI G+ AGRIVMGLFG+ VPKT ENFRALCTGEK  G       YKGS+FHRII  FM+Q             SIYG KF DENF LKHTGPG+LS
Sbjct:   92 KVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYG-------YKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILS 190          
BLAST of CF509902 vs. ExPASy Swiss-Prot
Match: PPID_RHIOR (Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus oryzae GN=cyp12 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.030e-30
Identity = 67/102 (65.69%), Postives = 72/102 (70.59%), Query Frame = 2
Query:  143 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLS 448
            +VYFD+ I  KP GRIV  LF   VPKTAENFRALCTGEKG GKSGKPL Y+GS FHRII +FM+Q            ESIYGEKF DENF LKH  P LLS
Sbjct:    5 RVYFDITIGNKPEGRIVFELFKDIVPKTAENFRALCTGEKGEGKSGKPLSYQGSLFHRIIKNFMIQGGDFTAGNGTGGESIYGEKFEDENFVLKHEKPFLLS 106          
BLAST of CF509902 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.345e-30
Identity = 63/102 (61.76%), Postives = 71/102 (69.61%), Query Frame = 2
Query:  143 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLS 448
            +VYFD+ I GK  GRI M L+   VPKTA+NFR+LCTGEKGIGKSGKPLHYKGS FHR+I  FM+Q            ESIYG KF DE F +KH  P LLS
Sbjct:   12 RVYFDISIGGKSVGRITMELYADLVPKTADNFRSLCTGEKGIGKSGKPLHYKGSVFHRVIKQFMIQGGDFTAGDGTGGESIYGNKFDDEAFPIKHEKPFLLS 113          
BLAST of CF509902 vs. ExPASy Swiss-Prot
Match: PPIB_NEUCR (Peptidyl-prolyl cis-trans isomerase B OS=Neurospora crassa GN=cpr-2 PE=3 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 1.757e-30
Identity = 66/106 (62.26%), Postives = 76/106 (71.70%), Query Frame = 2
Query:  131 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLS 448
            +IT+KVYFD+E   KP GRIVMGL+GK VPKTAENFRAL TGEKG G       Y+GSTFHR+I  FM+Q            +SIYG+KFPDENFKLKH+  GLLS
Sbjct:   32 KITHKVYFDIEQGDKPLGRIVMGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKQFMIQGGDFTKGDGTGGKSIYGDKFPDENFKLKHSKKGLLS 130          
BLAST of CF509902 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 2.294e-30
Identity = 62/102 (60.78%), Postives = 71/102 (69.61%), Query Frame = 2
Query:  143 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLS 448
            +V+FD+ ++G P GRI M LF    P TAENFRALCTGEKG+GK GKPLH+KGS FHR+IP FM Q            ESIYG KF DENF  KHTG G+LS
Sbjct:    5 RVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILS 106          
BLAST of CF509902 vs. ExPASy Swiss-Prot
Match: PPIB_ASPNG (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus niger GN=cypB PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 8.718e-30
Identity = 66/125 (52.80%), Postives = 82/125 (65.60%), Query Frame = 2
Query:   74 VLLATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLS 448
            VL    + + A+ +     +IT+KV+FD+E   KP GR+V+GL+GK VPKTAENFRAL TGEKG G       Y+GSTFHR+I  FM+Q            +SIYGEKF DENFKL+HT  GLLS
Sbjct:   13 VLAVGLALVHAEDAQPRGPKITSKVFFDIEHGDKPLGRVVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKDFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLS 130          
BLAST of CF509902 vs. ExPASy Swiss-Prot
Match: PPIB_ASPFU (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus fumigatus GN=cpr2 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.139e-29
Identity = 65/106 (61.32%), Postives = 76/106 (71.70%), Query Frame = 2
Query:  131 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLS 448
            +IT+KV+FD+E   KP GRIV+GL+GK VPKTAENFRAL TGEKG G       Y+GSTFHR+I SFM+Q            +SIYGEKF DENFKL+HT  GLLS
Sbjct:   33 KITSKVFFDIEHGDKPLGRIVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKSFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLS 131          
BLAST of CF509902 vs. ExPASy Swiss-Prot
Match: PPID_ASPFU (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus fumigatus GN=cpr6 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.942e-29
Identity = 64/106 (60.38%), Postives = 73/106 (68.87%), Query Frame = 2
Query:  143 KVYFDVEIAGKPAGRIVMGL----FGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLS 448
            +VYFD++I  + AGRI + L    F   VPKTAENFRALCTGEKG+GK  KPL YKGS FHR+I  FM+Q            ESIYGEKFPDENF+LKH  P LLS
Sbjct:    9 RVYFDIQIGSQKAGRIALELVRLPFNDVVPKTAENFRALCTGEKGVGKQRKPLSYKGSIFHRVIKQFMIQGGDFTNFNGTGGESIYGEKFPDENFELKHDRPFLLS 114          
The following BLAST results are available for this feature:
BLAST of CF509902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
PPIB_CRYNE3.540e-3163.81Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]
PPID_EMENI4.623e-3161.76Peptidyl-prolyl cis-trans isomerase D OS=Emericell... [more]
CP20C_ARATH6.038e-3164.15Peptidyl-prolyl cis-trans isomerase CYP20-3, chlor... [more]
PPID_RHIOR1.030e-3065.69Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus ... [more]
PPID_GIBZE1.345e-3061.76Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
PPIB_NEUCR1.757e-3062.26Peptidyl-prolyl cis-trans isomerase B OS=Neurospor... [more]
CP18D_ARATH2.294e-3060.78Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]
PPIB_ASPNG8.718e-3052.80Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_ASPFU1.139e-2961.32Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPID_ASPFU1.942e-2960.38Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-412 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-82_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509902 ID=CF509902; Name=CF509902; organism=Citrus sinensis; type=EST; length=448bp
GCGAAACGAGAAACAACGAAGTGATACATGGCTTCGACAAATTTGCTTCC
ACTCACGATGCTATGGGCCTGTTGTCCTGTTGGCCACTTTCTCTTCAATT
CAGGCGAAGAAATCGGATCAGAATTTGAAAGAAATCACAAACAAAGTTTA
CTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTATTGTAATGGGTC
TCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCCGAGCTTTGTGC
ACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACTCCACTACAAGGG
AAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTCAAGGAGGTGATT
TCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTATGGAGAGAAGTTC
CCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGGGCTTTTGTCA
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