CF509944

Overview
NameCF509944
Unique NameCF509944
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: IMK2_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 OS=Arabidopsis thaliana GN=IMK2 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.302e-16
Identity = 55/125 (44.00%), Postives = 72/125 (57.60%), Query Frame = 3
Query:  225 ALVSIKRALNDPHGVLNNWDED-SVDPCS-WAMITCSPENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            AL +IK  L D  GVL +W+   S   CS WA I C     V+ +  P + L GT+S  IG L +LR++ L NN I+G +P  LG L  L+ + L NNRLSG IP S G    LQ L L++N L+
Sbjct:   56 ALQAIKHELIDFTGVLKSWNNSASSQVCSGWAGIKCL-RGQVVAIQLPWKGLGGTISEKIGQLGSLRKLSLHNNVIAGSVPRSLGYLKSLRGVYLFNNRLSGSIPVSLGNCPLLQNLDLSSNQLT 179          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.075e-15
Identity = 47/148 (31.76%), Postives = 75/148 (50.68%), Query Frame = 3
Query:  222 DALVSIKRALNDPHGVLNNWDEDSVDPCSWAMITCSPE-----------NLVIGLGAP--------------SQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSL 590
            +AL+S + A+      ++ W  +  DPC+W  +TC  +           + ++G   P              + +L G +  ++GN T L ++ LQ+N  +G IP ++G LP LQ LD+S+N LSG IP S GQL  L    ++NN L
Sbjct:   35 EALLSFRNAVTRSDSFIHQWRPEDPDPCNWNGVTCDAKTKRVITLNLTYHKIMGPLPPDIGKLDHLRLLMLHNNALYGAIPTALGNCTALEEIHLQSNYFTGPIPAEMGDLPGLQKLDMSSNTLSGPIPASLGQLKKLSNFNVSNNFL 182          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.404e-15
Identity = 57/158 (36.08%), Postives = 77/158 (48.73%), Query Frame = 3
Query:  216 EVDALVSIKRALNDPHGVLNNWDEDSVDPCS--WAMITCSPENLVIG------LGAPSQSLSGTLS--------------------GSI----GNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            EV AL  IK +LNDP   L NW     DPC+  W  + C    L  G      L   S +LSG LS                    GSI    GN+ +L  +LL  N ++G +P +LG LP L  + +  NR+SG +P+SF  LN  ++  +NNNS+S
Sbjct:   37 EVRALRVIKESLNDPVHRLRNWKHG--DPCNSNWTGVVCFNSTLDDGYLHVSELQLFSMNLSGNLSPELGRLSRLTILSFMWNKITGSIPKEIGNIKSLELLLLNGNLLNGNLPEELGFLPNLDRIQIDENRISGPLPKSFANLNKTKHFHMNNNSIS 192          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: Y5458_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45840 OS=Arabidopsis thaliana GN=At5g45840 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.128e-15
Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 3
Query:  243 RALNDPHGVLNNWDEDSVDP-CSWAMITCSPENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            R  +DPHG L NW+    D  CSW  +TC  +N V  L     SL GTL+  +  L+ LR ++L  N +SG IP +  S  KL+ LDL +N L+GV+P    ++ + + L L+ N  +
Sbjct:   43 RVDSDPHGTLANWNVSDHDHFCSWFGVTCV-DNKVQMLNLSGCSLGGTLAPELSQLSELRSLILSKNKLSGDIPNEFASFAKLEFLDLRDNNLNGVVPPELNKVLTPENLLLSGNKFA 159          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.128e-15
Identity = 41/129 (31.78%), Postives = 73/129 (56.59%), Query Frame = 3
Query:  210 NHEVDALVSIKRALNDPHGVLNNWDEDSVDPCSWAMITCSPE-NLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            N +   L  +K +L+DP   L++W+ +   PC W+ ++C+ + + V  +   S +L+G     I  L+NL  + L NN+I+  +P  + +   LQTLDLS N L+G +P++   + +L +L L  N+ S
Sbjct:   17 NQDGFILQQVKLSLDDPDSYLSSWNSNDASPCRWSGVSCAGDFSSVTSVDLSSANLAGPFPSVICRLSNLAHLSLYNNSINSTLPLNIAACKSLQTLDLSQNLLTGELPQTLADIPTLVHLDLTGNNFS 145          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.188e-14
Identity = 45/128 (35.16%), Postives = 66/128 (51.56%), Query Frame = 3
Query:  210 NHEVDALVSIKRALND-PHGVLNNWDEDSVDPCSWAMITCSPENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSL 590
            N +  AL+S+ R     P  +  +W+     PCSW  + C     V  L   S  +SG     I +L +L++V+L  N   G IP QLG+   L+ +DLS+N  +G IP + G L +L+ L L  NSL
Sbjct:   25 NSDGAALLSLTRHWTSIPSDITQSWNASDSTPCSWLGVECDRRQFVDTLNLSSYGISGEFGPEISHLKHLKKVVLSGNGFFGSIPSQLGNCSLLEHIDLSSNSFTGNIPDTLGALQNLRNLSLFFNSL 152          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.648e-14
Identity = 47/140 (33.57%), Postives = 72/140 (51.43%), Query Frame = 3
Query:  201 EPRNHEVDALVSIK-RALNDPHGVLNNWDEDSVDPCSWAMITCSPEN--------LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            E  N +   L+ +K R   D    L+NW+     PC+W  + CS +         +V  L   S +LSG +S SIG L NL  + L  N ++G IP ++G+  KL+ + L+NN+  G IP    +L+ L+   + NN LS
Sbjct:   31 ESLNSDGQFLLELKNRGFQDSLNRLHNWNGIDETPCNWIGVNCSSQGSSSSSNSLVVTSLDLSSMNLSGIVSPSIGGLVNLVYLNLAYNALTGDIPREIGNCSKLEVMFLNNNQFGGSIPVEINKLSQLRSFNICNNKLS 170          

HSP 2 Score: 68.1662 bits (165), Expect = 3.578e-11
Identity = 38/74 (51.35%), Postives = 47/74 (63.51%), Query Frame = 3
Query:  375 SGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQ-TLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            SG +  +IGNLT+L ++ +  N  SG IPPQLG L  LQ  ++LS N  SG IP   G L+ L YL LNNN LS
Sbjct:  602 SGNIPFTIGNLTHLTELQMGGNLFSGSIPPQLGLLSSLQIAMNLSYNDFSGEIPPEIGNLHLLMYLSLNNNHLS 675          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.458e-14
Identity = 48/132 (36.36%), Postives = 69/132 (52.27%), Query Frame = 3
Query:  189 TLSYEPRNHEVDALVSIKRALNDPHGVLNNWDEDSVDPCSWAMITCSPENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNN 584
            +LS    + ++ A++S+K++LN P      W +   DPC W  I C+    V  +      L GTLS  + NL+ L ++ LQ NNISG + P L  L  LQ L LSNN    +    F  L SLQ + ++NN
Sbjct:   19 SLSKADSDGDLSAMLSLKKSLNPPSSF--GWSDP--DPCKWTHIVCTGTKRVTRIQIGHSGLQGTLSPDLRNLSELERLELQWNNISGPV-PSLSGLASLQVLMLSNNNFDSIPSDVFQGLTSLQSVEIDNN 145          

HSP 2 Score: 69.3218 bits (168), Expect = 1.606e-11
Identity = 37/106 (34.91%), Postives = 65/106 (61.32%), Query Frame = 3
Query:  219 VDALVSIKRALNDPHGVLNNWDEDSVDPCS-WAMITCSPENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIP 533
            V +L+ I  + + P  +  +W  +  DPC+ W  I CS  N+ + +      L+GT+S   G + +L++++L  NN++G IP +L +LP L+TLD+S+N+L G +P
Sbjct:  325 VKSLLLIASSFDYPPRLAESWKGN--DPCTNWIGIACSNGNITV-ISLEKMELTGTISPEFGAIKSLQRIILGINNLTGMIPQELTTLPNLKTLDVSSNKLFGKVP 427          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: Y4361_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.516e-14
Identity = 48/150 (32.00%), Postives = 75/150 (50.00%), Query Frame = 3
Query:  216 EVDALVSIKRALNDPHGVLNNWDEDS-VDPCSWAMITCSPEN-----------------------LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            E+DAL + K  L+DP G L +WD  +   PC W  + C+                          ++  L   S S +GT+  S+   T L  V LQ N++SG +PP + +L  L+  +++ NRLSG IP   G  +SLQ+L +++N+ S
Sbjct:   28 EIDALTAFKLNLHDPLGALTSWDPSTPAAPCDWRGVGCTNHRVTEIRLPRLQLSGRISDRISGLRMLRKLSLRSNSFNGTIPTSLAYCTRLLSVFLQYNSLSGKLPPAMRNLTSLEVFNVAGNRLSGEIP--VGLPSSLQFLDISSNTFS 175          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.704e-14
Identity = 49/159 (30.82%), Postives = 84/159 (52.83%), Query Frame = 3
Query:  195 SYEPRNHEVDALVSIKRALNDPHGVLNNWDE-DSVDPCSWAMITCSPENL-VIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGS------------------------LPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            S  P N+E  AL++IK + ++   +L +WD+  + D CSW  + C   +L V+ L   + +L G +S ++G+L NL+ + LQ N + G IP ++G+                        L +L+ L+L NN+L+G IP +  Q+ +L+ L L  N L+
Sbjct:   24 SVSPMNNEGKALMAIKASFSNVANMLLDWDDVHNHDFCSWRGVFCDNVSLNVVSLNLSNLNLGGEISSALGDLMNLQSIDLQGNKLGGQIPDEIGNCVSLAYVDFSTNLLFGDIPFSISKLKQLEFLNLKNNQLTGPIPATLTQIPNLKTLDLARNQLT 182          
The following BLAST results are available for this feature:
BLAST of CF509944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
IMK2_ARATH6.302e-1644.00Probably inactive leucine-rich repeat receptor-lik... [more]
FEI1_ARATH1.075e-1531.76LRR receptor-like serine/threonine-protein kinase ... [more]
Y1684_ARATH1.404e-1536.08Probable LRR receptor-like serine/threonine-protei... [more]
Y5458_ARATH3.128e-1538.14Probable LRR receptor-like serine/threonine-protei... [more]
HSL1_ARATH3.128e-1531.78Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
RPK1_IPONI1.188e-1435.16Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
Y2317_ARATH2.648e-1433.57Probable leucine-rich repeat receptor-like protein... [more]
TMK1_ARATH3.458e-1436.36Probable receptor protein kinase TMK1 OS=Arabidops... [more]
Y4361_ARATH4.516e-1432.00Probable LRR receptor-like serine/threonine-protei... [more]
ERL2_ARATH7.704e-1430.82LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-456 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-83_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509944 ID=CF509944; Name=CF509944; organism=Citrus sinensis; type=EST; length=593bp
TGATTTTTGCCTAGGCAGTTCAGTTTCATGTTGTGTTTGTGAAACAAAGT
TTGTTCATTTATTGATTCAATGATATCACAATACCACCAGCTCTATAGCT
TTACTTACCGGCTAGCTTTCTAAATACCATGGCTATCTTCAAGCTCTTTC
TTCTCTTCTTCTTCTTTCTTTCCTTTTTCTCTCTTGCTACTCTCTCTTAT
GAGCCTAGAAACCATGAAGTGGATGCTTTGGTGAGCATAAAGAGAGCATT
GAATGATCCTCACGGAGTGTTAAACAACTGGGATGAAGACTCTGTGGATC
CTTGTAGTTGGGCTATGATAACTTGCTCGCCTGAGAATCTTGTTATAGGC
CTGGGAGCACCAAGCCAGTCTCTTTCTGGAACTTTGTCCGGATCAATAGG
AAATCTCACCAATCTTCGCCAAGTATTATTGCAAAACAACAACATTTCTG
GTGGAATCCCACCTCAGCTTGGCTCTCTTCCAAAACTTCAAACTTTGGAT
CTCTCAAACAACAGACTCTCTGGTGTAATCCCACGCTCTTTTGGGCAATT
GAATAGTCTTCAATATCTGAGGCTCAACAACAATAGCTTGAGT
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