CF509944

Overview
NameCF509944
Unique NameCF509944
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length593
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: Y4294_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20940 OS=Arabidopsis thaliana GN=At4g20940 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.006e-13
Identity = 51/158 (32.28%), Postives = 81/158 (51.27%), Query Frame = 3
Query:  210 NHEVDALVSIKRAL-NDPHG-VLNNWDEDSVD----PCSWAMITCSPENL------------------------VIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            + ++ AL+  K+ + +DP G VLN+W+++S+D    P SW  I C+  N+                        ++ L   + SLSG L   +G+  +L+ + L +N  S  +P ++G    L+ L LS N  SG IP S G L SLQ L +++NSLS
Sbjct:    6 SQDIMALLEFKKGIKHDPTGFVLNSWNDESIDFNGCPSSWNGIVCNGGNVAGVVLDNLGLTADADFSLFSNLTKLVKLSMSNNSLSGVLPNDLGSFKSLQFLDLSDNLFSSSLPKEIGRSVSLRNLSLSGNNFSGEIPESMGGLISLQSLDMSSNSLS 163          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: Y2579_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 OS=Arabidopsis thaliana GN=At2g25790 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.927e-13
Identity = 48/128 (37.50%), Postives = 74/128 (57.81%), Query Frame = 3
Query:  213 HEVDALVSIKRALNDPHGVLNNWDEDSV-DPCSWAMITCSPENLVIGLGAPSQSLSGT-LSGSIGNLTNLRQVLLQNNNISGGIPPQL--GSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNN 584
            +E++ L+S K ++ DP   L++W   S  D C W+ + C+  + V+ L    +++SG  L+ +   L  L+ + L NNN+SG IP  +   S P L+ L+LSNN  SG IPR F  L +L  L L+NN
Sbjct:   30 NELELLLSFKSSIQDPLKHLSSWSYSSTNDVCLWSGVVCNNISRVVSLDLSGKNMSGQILTAATFRLPFLQTINLSNNNLSGPIPHDIFTTSSPSLRYLNLSNNNFSGSIPRGF--LPNLYTLDLSNN 155          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: Y1124_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.823e-13
Identity = 37/85 (43.53%), Postives = 55/85 (64.71%), Query Frame = 3
Query:  339 LVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            +++ L      L G +S  + NLTN++ + L  N ++G IPP+LG+L K+Q LDLS N LSG IP S G LN+L +  ++ N+LS
Sbjct:  381 VLLELDVSGNDLEGKISKKLLNLTNIKILDLHRNRLNGSIPPELGNLSKVQFLDLSQNSLSGPIPSSLGSLNTLTHFNVSYNNLS 465          

HSP 2 Score: 71.2478 bits (173), Expect = 4.227e-12
Identity = 45/128 (35.16%), Postives = 73/128 (57.03%), Query Frame = 3
Query:  216 EVDALVSIKRALND-PHGVLNNWDEDSVDPC-SWAMITCSPENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            E D L+  K +++D P+  L +W  D  D C S+  ITC+P+  V  +   + SL+GTL+  + NL  +R + L  N  +G +P     L  L T+++S+N LSG IP    +L+SL++L L+ N  +
Sbjct:   26 ERDILLQFKGSISDDPYNSLASWVSDG-DLCNSFNGITCNPQGFVDKIVLWNTSLAGTLAPGLSNLKFIRVLNLFGNRFTGNLPLDYFKLQTLWTINVSSNALSGPIPEFISELSSLRFLDLSKNGFT 152          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.521e-13
Identity = 36/75 (48.00%), Postives = 53/75 (70.67%), Query Frame = 3
Query:  369 SLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            S+SG++  +IG L  L+ +LL  NN+ G IP +LG+ P+L  +D S N L+G IPRSFG+L +LQ L+L+ N +S
Sbjct:  273 SISGSIPTTIGGLKKLQSLLLWQNNLVGKIPTELGNCPELWLIDFSENLLTGTIPRSFGKLENLQELQLSVNQIS 347          

HSP 2 Score: 72.7886 bits (177), Expect = 1.453e-12
Identity = 42/123 (34.15%), Postives = 65/123 (52.85%), Query Frame = 3
Query:  225 ALVSIKRALNDPHGVLNNWDEDSVDPCSWAMITCSPENLVIGLGAPSQSLSGTLS-GSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSL 590
            AL+S K  LN      ++W      PC+W  + C+    V  +      L G+L   S+ +L +L  + L + N++G IP ++G   +L+ LDLS+N LSG IP    +L  L+ L LN N+L
Sbjct:   31 ALLSWKSQLNISGDAFSSWHVADTSPCNWVGVKCNRRGEVSEIQLKGMDLQGSLPVTSLRSLKSLTSLTLSSLNLTGVIPKEIGDFTELELLDLSDNSLSGDIPVEIFRLKKLKTLSLNTNNL 153          

HSP 3 Score: 67.3958 bits (163), Expect = 6.104e-11
Identity = 34/77 (44.16%), Postives = 48/77 (62.34%), Query Frame = 3
Query:  363 SQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            S  LSG +   IGN TNL ++ L  N ++G IP ++G+L  L  +D+S NRL G IP +     SL++L L+ NSLS
Sbjct:  439 SNDLSGFIPPDIGNCTNLYRLRLNGNRLAGSIPSEIGNLKNLNFVDISENRLVGSIPPAISGCESLEFLDLHTNSLS 515          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.517e-13
Identity = 46/133 (34.59%), Postives = 75/133 (56.39%), Query Frame = 3
Query:  216 EVDALVSIKRALNDPHGVLNNWDEDSVDPCS--WAMITCSPENL-----VIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            +V AL  + R L DP   L +W +   DPC+  W  + C P+       V  L   + +L+G L+  +G L+NL  +    N+++G IPP+LG+L  L  L LS N+L+G +P+  G L++L  L+++ N +S
Sbjct:   32 DVSALQYVHRKLKDPLNHLQDWKK--TDPCASNWTGVICIPDPSDGFLHVKELRLLNMNLTGQLAPELGLLSNLTILNFMWNDLTGQIPPELGNLTHLIFLLLSGNQLTGSLPQELGSLSNLLILQIDYNEIS 162          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.517e-13
Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = 3
Query:  369 SLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            + SG L   I  + +L+ ++L  NN SG IP + G++P LQ LDLS N+L+G IP SFG+L SL +L L NNSLS
Sbjct:  384 NFSGQLPTEISQIQSLKFLILAYNNFSGDIPQEYGNMPGLQALDLSFNKLTGSIPASFGKLTSLLWLMLANNSLS 458          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 73.559 bits (179), Expect = 8.517e-13
Identity = 52/130 (40.00%), Postives = 71/130 (54.62%), Query Frame = 3
Query:  213 HEVDALVSIKRALND-PHGVLNNWDEDSVDPCSWAMITCSPENL--VIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            H+++AL      L   P G +N+    S D C+W  ITC+  N   VI L   ++ LSG LS S+G L  +R + L  N I   IP  + +L  LQTLDLS+N LSG IP S   L +LQ   L++N  +
Sbjct:   34 HDLEALRDFIAHLEPKPDGWINS--SSSTDCCNWTGITCNSNNTGRVIRLELGNKKLSGKLSESLGKLDEIRVLNLSRNFIKDSIPLSIFNLKNLQTLDLSSNDLSGGIPTSI-NLPALQSFDLSSNKFN 160          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.517e-13
Identity = 46/154 (29.87%), Postives = 76/154 (49.35%), Query Frame = 3
Query:  210 NHEVDALVSIKRAL------NDPHGVLNNWDEDSVDPCSWAMITCSPENL--------------------------VIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRL 575
            N+++  L+ +K++L      +DP   L  W+ D+++ CSW  +TC    L                          +I L   S +L G +  ++ NLT+L  + L +N ++G IP QLGSL  +++L + +N L G IP + G L +LQ L L
Sbjct:   24 NNDLQTLLEVKKSLVTNPQEDDP---LRQWNSDNINYCSWTGVTCDNTGLFRVIALNLTGLGLTGSISPWFGRFDNLIHLDLSSNNLVGPIPTALSNLTSLESLFLFSNQLTGEIPSQLGSLVNIRSLRIGDNELVGDIPETLGNLVNLQMLAL 174          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.112e-12
Identity = 45/128 (35.16%), Postives = 62/128 (48.44%), Query Frame = 3
Query:  267 VLNNWDEDSVDPCSWAMITCSPENLVIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNI-------------------------SGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRL 575
            VL +W+  S   C+W  +TC     +IGL      L+G++S SIG   NL  + L +N +                         SG IP QLGSL  L++L L +N L+G IP +FG L +LQ L L
Sbjct:   49 VLRDWNSGSPSYCNWTGVTCGGRE-IIGLNLSGLGLTGSISPSIGRFNNLIHIDLSSNRLVGPIPTTLSNLSSSLESLHLFSNLLSGDIPSQLGSLVNLKSLKLGDNELNGTIPETFGNLVNLQMLAL 175          
BLAST of CF509944 vs. ExPASy Swiss-Prot
Match: RPKL_ARATH (Receptor protein kinase-like protein At4g34220 OS=Arabidopsis thaliana GN=At4g34220 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.453e-12
Identity = 39/123 (31.71%), Postives = 68/123 (55.28%), Query Frame = 3
Query:  249 LNDPHGVLNNWDEDSVDPCSWAMITCS-------PENL-VIGLGAPSQSLSGTLSGSIGNLTNLRQVLLQNNNISGGIPPQLGSLPKLQTLDLSNNRLSGVIPRSFGQLNSLQYLRLNNNSLS 593
            L DP  VL NW+ D   PC W  +TC+       P+   V  L  P++ L G+++  + ++  LR + L +N  +G +P  + +  +LQ++ L +N LSG +P+S   + +LQ L L+ N+ +
Sbjct:   42 LTDPLSVLRNWNYDDATPCLWTGVTCTELGKPNTPDMFRVTSLVLPNKHLLGSITPDLFSIPYLRILDLSSNFFNGSLPDSVFNATELQSISLGSNNLSGDLPKSVNSVTNLQLLNLSANAFT 164          
The following BLAST results are available for this feature:
BLAST of CF509944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
Y4294_ARATH1.006e-1332.28Probable LRR receptor-like serine/threonine-protei... [more]
Y2579_ARATH2.927e-1337.50Probably inactive leucine-rich repeat receptor-lik... [more]
Y1124_ARATH3.823e-1343.53Probable LRR receptor-like serine/threonine-protei... [more]
Y4265_ARATH6.521e-1348.00Probable LRR receptor-like serine/threonine-protei... [more]
Y5374_ARATH8.517e-1334.59Probable LRR receptor-like serine/threonine-protei... [more]
Y1743_ARATH8.517e-1350.67Probable LRR receptor-like serine/threonine-protei... [more]
PSKR1_ARATH8.517e-1340.00Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
GSO1_ARATH8.517e-1329.87LRR receptor-like serine/threonine-protein kinase ... [more]
GSO2_ARATH1.112e-1235.16LRR receptor-like serine/threonine-protein kinase ... [more]
RPKL_ARATH1.453e-1231.71Receptor protein kinase-like protein At4g34220 OS=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-456 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-83_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509944 ID=CF509944; Name=CF509944; organism=Citrus sinensis; type=EST; length=593bp
TGATTTTTGCCTAGGCAGTTCAGTTTCATGTTGTGTTTGTGAAACAAAGT
TTGTTCATTTATTGATTCAATGATATCACAATACCACCAGCTCTATAGCT
TTACTTACCGGCTAGCTTTCTAAATACCATGGCTATCTTCAAGCTCTTTC
TTCTCTTCTTCTTCTTTCTTTCCTTTTTCTCTCTTGCTACTCTCTCTTAT
GAGCCTAGAAACCATGAAGTGGATGCTTTGGTGAGCATAAAGAGAGCATT
GAATGATCCTCACGGAGTGTTAAACAACTGGGATGAAGACTCTGTGGATC
CTTGTAGTTGGGCTATGATAACTTGCTCGCCTGAGAATCTTGTTATAGGC
CTGGGAGCACCAAGCCAGTCTCTTTCTGGAACTTTGTCCGGATCAATAGG
AAATCTCACCAATCTTCGCCAAGTATTATTGCAAAACAACAACATTTCTG
GTGGAATCCCACCTCAGCTTGGCTCTCTTCCAAAACTTCAAACTTTGGAT
CTCTCAAACAACAGACTCTCTGGTGTAATCCCACGCTCTTTTGGGCAATT
GAATAGTCTTCAATATCTGAGGCTCAACAACAATAGCTTGAGT
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