CF509988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509988 vs. ExPASy Swiss-Prot
Match: G3PT_MOUSE (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Mus musculus GN=Gapdhs PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.228e-21 Identity = 49/103 (47.57%), Postives = 70/103 (67.96%), Query Frame = 3 Query: 60 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVF 368 +++ +GINGFGRIGRLV RV +++ + +VAVNDPFI +YM YMFKYDS HG++K N + L+ + + ++P+EIPW+ G YVVE TGV+ Sbjct: 106 RELTVGINGFGRIGRLVLRVCMEKG-IRVVAVNDPFIDPEYMVYMFKYDSTHGRYKGNVEHKNGQ--LVVDNLEINTYQCKDPKEIPWSSIGNPYVVECTGVY 205
BLAST of CF509988 vs. ExPASy Swiss-Prot
Match: G3P1_GIALA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Giardia lamblia GN=GAP1 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.736e-21 Identity = 49/102 (48.04%), Postives = 66/102 (64.71%), Query Frame = 3 Query: 66 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFT 371 I++GINGFGRIGR+ R +L D V++VA+NDPF +YM YM KYD+VHG++ +D T+ ++VF PEEIPW KT + V+E TG FT Sbjct: 3 IRLGINGFGRIGRMALRASLNIDGVQVVAINDPFTDCEYMEYMLKYDTVHGRFDGTIAHSEDSITV--NGNKISVFKSMKPEEIPWGKTQVDIVLECTGRFT 102
BLAST of CF509988 vs. ExPASy Swiss-Prot
Match: G3P1_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap1 PE=3 SV=4) HSP 1 Score: 100.523 bits (249), Expect = 2.736e-21 Identity = 48/103 (46.60%), Postives = 70/103 (67.96%), Query Frame = 3 Query: 63 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFT 371 K+K+GINGFGRIGRLV R + ++E V +ND + D + Y+ KYDS HG+ + ++++ KD+ ++ G + RNP E+PW K GA+YVVESTG+FT Sbjct: 3 KLKVGINGFGRIGRLVLRAGINNPNIEFVGIND-LVPPDNLAYLLKYDSTHGKLR-SQVEAKDDGIVIDGHF-IPCVSVRNPAELPWGKLGADYVVESTGLFT 102
BLAST of CF509988 vs. ExPASy Swiss-Prot
Match: G3P1_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena sp. (strain PCC 7120) GN=gap1 PE=1 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 2.736e-21 Identity = 48/103 (46.60%), Postives = 70/103 (67.96%), Query Frame = 3 Query: 63 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFT 371 K+K+GINGFGRIGRLV R + ++E V +ND + D + Y+ KYDS HG+ + ++++ KD+ ++ G + RNP E+PW K GA+YVVESTG+FT Sbjct: 3 KLKVGINGFGRIGRLVLRAGINNPNIEFVGIND-LVPPDNLAYLLKYDSTHGRLR-SQVETKDDGIVIDGHF-IPCVSVRNPAELPWGKLGADYVVESTGLFT 102
BLAST of CF509988 vs. ExPASy Swiss-Prot
Match: G3P1_JACOR (Glyceraldehyde-3-phosphate dehydrogenase, muscle OS=Jaculus orientalis PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 3.573e-21 Identity = 55/132 (41.67%), Postives = 74/132 (56.06%), Query Frame = 3 Query: 66 IKIGINGFGRIGRLVARVALQ------------------------------RDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFT 371 +K+G+NGFGRIGRLV R A + V++VA+NDPFI +YM YMFKYDS HG++K +K ++ K ++ G + +F R+P +I W GAEYVVESTGVFT Sbjct: 2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFKYDSTHGKFKVDIVAINDPFIDLNYMVYMFKYDSTHGKFK-GTVKAENGKLVINGH-AITIFQERDPSKIKWGDAGAEYVVESTGVFT 131
BLAST of CF509988 vs. ExPASy Swiss-Prot
Match: G3P1_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Synechocystis sp. (strain PCC 6803) GN=gap1 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.667e-21 Identity = 49/102 (48.04%), Postives = 67/102 (65.69%), Query Frame = 3 Query: 66 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFT 371 +KIGINGFGRIGRLVAR+A+ V LV +ND + + Y+FKYDS HG + V E+ ++ ++ + F RNP ++PW GA+YVVESTG+FT Sbjct: 2 LKIGINGFGRIGRLVARIAMANPQVTLVGIND-LVPASNLAYLFKYDSTHG--SYGGTVVAKEEGIVIDDQFIPCFSQRNPAQLPWGDLGADYVVESTGLFT 100
BLAST of CF509988 vs. ExPASy Swiss-Prot
Match: G3P_MESAU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mesocricetus auratus GN=GAPDH PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.773e-20 Identity = 49/93 (52.69%), Postives = 64/93 (68.82%), Query Frame = 3 Query: 93 RIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFT 371 RIGRLV R A V++VA+NDPFI +YM YMF+YDS HG++K +K ++ K ++ G K + +F R+P I W GAEYVVESTGVFT Sbjct: 1 RIGRLVTRAAFTSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFK-GTVKAENGKLVING-KAITIFQERDPTNIKWGDAGAEYVVESTGVFT 91
BLAST of CF509988 vs. ExPASy Swiss-Prot
Match: G3P1_ESCF3 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=gapA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.025e-20 Identity = 48/101 (47.52%), Postives = 69/101 (68.32%), Query Frame = 3 Query: 66 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVF 368 IK+GINGFGRIGR+V R A +R D+E+VA+ND + DYM YM KYDS HG++ ++VKD ++ G+K + V R+P + W + G + V E+TG+F Sbjct: 3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIF 100
BLAST of CF509988 vs. ExPASy Swiss-Prot
Match: G3P_SHEEP (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Ovis aries GN=GAPDH PE=2 SV=4) HSP 1 Score: 96.6709 bits (239), Expect = 3.951e-20 Identity = 48/92 (52.17%), Postives = 62/92 (67.39%), Query Frame = 3 Query: 96 IGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFT 371 IGRLV R A V++VA+NDPFI YM YMF+YDS HG++ H +K ++ K ++ G K + +F R+P I W GAEYVVESTGVFT Sbjct: 1 IGRLVTRAAFNTGKVDIVAINDPFIDLHYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KAITIFQERDPANIKWGDAGAEYVVESTGVFT 90
BLAST of CF509988 vs. ExPASy Swiss-Prot
Match: G3P_RALSO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ralstonia solanacearum GN=gapA PE=3 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 3.951e-20 Identity = 51/102 (50.00%), Postives = 70/102 (68.63%), Query Frame = 3 Query: 66 IKIGINGFGRIGRLVARVALQR-DDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVF 368 IKIGINGFGRIGR+V R A+ D+E+VA+ND + DY+ YM KYDSVHG++ E+ V D TL+ K + + ++P E+ W + GA+ VVESTG+F Sbjct: 3 IKIGINGFGRIGRMVFRAAIANFKDIEVVAIND-LLEPDYLAYMLKYDSVHGRF-DGEVSV-DGNTLVVNGKKIRLTAVKDPAELKWGEVGADVVVESTGIF 101 The following BLAST results are available for this feature:
BLAST of CF509988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 234
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509988 ID=CF509988; Name=CF509988; organism=Citrus sinensis; type=EST; length=416bpback to top |