CF510000

Overview
NameCF510000
Unique NameCF510000
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length578
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510000 vs. ExPASy Swiss-Prot
Match: PECR_RAT (Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus GN=Pecr PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.905e-14
Identity = 51/171 (29.82%), Postives = 81/171 (47.37%), Query Frame = 3
Query:   87 SVAIMGRRKQVLDAAVSALR-----SLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHY---TASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPG 575
            +V I  R+   L AAV  LR     S   +    + ++R++E    +V+ST   +GK++ LVN A G F+  AED++  G++ V++ +  GTF MC       K             I+NI   L+    TA+    H          +T+ +AL W A   +R+N +APG
Sbjct:   44 NVVIASRKLDRLTAAVDELRASQPPSSSTQVTAIQCNIRKEEEVNNLVKSTLAKYGKINFLVNNAGGQFMAPAEDITAKGWQAVIETNLTGTFYMC-------KAVYNSWMKDHGGSIVNIIVLLNNGFPTAA----HSGAARAGVYNLTKTMALTW-ASSGVRINCVAPG 202          

HSP 2 Score: 26.5646 bits (57), Expect = 2.905e-14
Identity = 11/22 (50.00%), Postives = 17/22 (77.27%), Query Frame = 2
Query:    2 LKGKVALITGGGSGIGFEISTQ 67
            L+ +VA++TGG +GIG  IS +
Sbjct:   16 LQNQVAVVTGGATGIGKAISRE 37          
BLAST of CF510000 vs. ExPASy Swiss-Prot
Match: PECR_PONAB (Peroxisomal trans-2-enoyl-CoA reductase OS=Pongo abelii GN=PECR PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 6.370e-14
Identity = 47/168 (27.98%), Postives = 79/168 (47.02%), Query Frame = 3
Query:   87 SVAIMGRRKQVLDAAVSALRS-----LGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPG 575
            +V I  R+ + L +A   L++        + +  + ++R +E    +V+ST + FGK++ LVN   G FL  AE +S  G+  V++ +  GTF MC       K             I+NI  ++  T     +H          +T++LALEW     +R+N +APG
Sbjct:   44 NVVIASRKLERLKSAAGELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDIFGKINFLVNNGGGQFLSLAEHISSKGWHAVLETNLTGTFYMC-------KAVYSSWMKEHGGSIVNIIVSIK-TGLPLAVHSGAARAGVYNLTKSLALEWACS-GVRINCVAPG 202          

HSP 2 Score: 27.335 bits (59), Expect = 6.370e-14
Identity = 10/16 (62.50%), Postives = 15/16 (93.75%), Query Frame = 2
Query:    2 LKGKVALITGGGSGIG 49
            L+G+VA++TGG +GIG
Sbjct:   16 LQGQVAIVTGGATGIG 31          
BLAST of CF510000 vs. ExPASy Swiss-Prot
Match: DHG2_BACSU (Glucose 1-dehydrogenase 2 OS=Bacillus subtilis GN=ycdF PE=1 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 6.403e-14
Identity = 45/152 (29.61%), Postives = 73/152 (48.03%), Query Frame = 3
Query:  123 DAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFL-VSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPG 575
            D  +  ++  G KAV  E DV ++E  + ++++  EHFG LD++VN +  N +     ++S   ++ V+D++  GTF     AL ++ K            +LNIS+          +           +T  LAL + AD  IRVN IAPG
Sbjct:   46 DETLEIIKQNGGKAVSVEADVSKEEGIQALLDTALEHFGTLDVMVNNSGFNGVEAMPHEMSLEDWQRVIDVNVTGTFLGAKAALNHMMK------NNIKGNVLNISSVHQQIPRPVNVQYSTSKGGIKMMTETLALNY-ADKGIRVNAIAPG 190          

HSP 2 Score: 30.8018 bits (68), Expect = 6.403e-14
Identity = 13/25 (52.00%), Postives = 17/25 (68.00%), Query Frame = 2
Query:    2 LKGKVALITGGGSGIGFEISTQFGK 76
            L GK A++TG   GIG  I+ +FGK
Sbjct:    5 LTGKTAIVTGSSKGIGKAIAERFGK 29          
BLAST of CF510000 vs. ExPASy Swiss-Prot
Match: DECR_HUMAN (2,4-dienoyl-CoA reductase, mitochondrial OS=Homo sapiens GN=DECR1 PE=1 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 1.809e-13
Identity = 50/162 (30.86%), Postives = 73/162 (45.06%), Query Frame = 3
Query:   96 IMGRRKQVLDAAVSALRS-LGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGP 578
            I  R+  VL A    + S  G K    + DVR  +  +  V    +  G  +I++N AAGNF+   E LSPN ++T+ DI   GT  +  E  K L K             L+I+     T S + +           ++++LA EWG  Y +R N I PGP
Sbjct:   88 IASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIK------AQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWG-KYGMRFNVIQPGP 242          

HSP 2 Score: 31.187 bits (69), Expect = 1.809e-13
Identity = 14/27 (51.85%), Postives = 19/27 (70.37%), Query Frame = 2
Query:    5 KGKVALITGGGSGIGFEISTQFGKHGA 85
            +GKVA ITGGG+G+G  ++T     GA
Sbjct:   58 QGKVAFITGGGTGLGKGMTTLLSSLGA 84          
BLAST of CF510000 vs. ExPASy Swiss-Prot
Match: PECR_HUMAN (Peroxisomal trans-2-enoyl-CoA reductase OS=Homo sapiens GN=PECR PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.976e-13
Identity = 47/168 (27.98%), Postives = 76/168 (45.24%), Query Frame = 3
Query:   87 SVAIMGRRKQVLDAAVSALRS-----LGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPG 575
            +V I  R+ + L +A   L++        + +  + ++R +E    +V+ST + FGK++ LVN   G FL  AE +S  G+  V++ +  GTF MC       K             I+NI            +H          +T++LALEW     IR+N +APG
Sbjct:   44 NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMC-------KAVYSSWMKEHGGSIVNIIVPTK-AGFPLAVHSGAARAGVYNLTKSLALEWACS-GIRINCVAPG 202          

HSP 2 Score: 27.335 bits (59), Expect = 3.976e-13
Identity = 10/16 (62.50%), Postives = 15/16 (93.75%), Query Frame = 2
Query:    2 LKGKVALITGGGSGIG 49
            L+G+VA++TGG +GIG
Sbjct:   16 LQGQVAIVTGGATGIG 31          
BLAST of CF510000 vs. ExPASy Swiss-Prot
Match: GRDH2_ARATH (Glucose and ribitol dehydrogenase homolog 2 OS=Arabidopsis thaliana GN=At3g05260 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 5.173e-13
Identity = 45/133 (33.83%), Postives = 62/133 (46.62%), Query Frame = 3
Query:  180 DVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGP 578
            D+  +E+ K+VVE     FG++D+LVN AA    VS ED+       V   +    F +   ALK++K+                S+ L YTA+   I            TR LAL+  A   IRVNG+APGP
Sbjct:  103 DLGFEENCKRVVEEVVNSFGRIDVLVNCAAEQHEVSIEDIDEARLERVFRTNIFSQFFLVKYALKHMKEGSSIINTTSVVAYAGNSSLLEYTATKGAI---------VSFTRGLALQL-APKGIRVNGVAPGP 225          

HSP 2 Score: 31.187 bits (69), Expect = 5.173e-13
Identity = 15/28 (53.57%), Postives = 18/28 (64.29%), Query Frame = 2
Query:    2 LKGKVALITGGGSGIGFEISTQFGKHGA 85
            L GKVAL+TGG SGIG  +   +   GA
Sbjct:   37 LHGKVALVTGGDSGIGKAVCHCYALEGA 64          
BLAST of CF510000 vs. ExPASy Swiss-Prot
Match: DHGA_BACME (Glucose 1-dehydrogenase A OS=Bacillus megaterium GN=gdhA PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.137e-12
Identity = 45/156 (28.85%), Postives = 76/156 (48.72%), Query Frame = 3
Query:  111 KQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASW-YQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPG 575
            ++ LDA    +   G +A+  +GDV ++E    +V++  + FG LD+++N A     V + +LS + +  V+D +  G F    EA+KY  +            ++N+S ++H    W   +H          +T  LALE+ A   IRVN I PG
Sbjct:   43 EEALDAK-KEVEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVE------NDIKGNVINMS-SVHEMIPWPLFVHYAASKGGMKLMTETLALEY-APKGIRVNNIGPG 189          

HSP 2 Score: 30.8018 bits (68), Expect = 1.137e-12
Identity = 13/28 (46.43%), Postives = 20/28 (71.43%), Query Frame = 2
Query:    2 LKGKVALITGGGSGIGFEISTQFGKHGA 85
            LK KV +ITGG +G+G  ++ +FG+  A
Sbjct:    5 LKDKVVVITGGSTGLGRAMAVRFGQEEA 32          
BLAST of CF510000 vs. ExPASy Swiss-Prot
Match: DHG4_BACME (Glucose 1-dehydrogenase 4 OS=Bacillus megaterium GN=gdhIV PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.137e-12
Identity = 45/156 (28.85%), Postives = 76/156 (48.72%), Query Frame = 3
Query:  111 KQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASW-YQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPG 575
            ++ LDA    +   G +A+  +GDV ++E    +V++  + FG LD+++N A     V + +LS + +  V+D +  G F    EA+KY  +            ++N+S ++H    W   +H          +T  LALE+ A   IRVN I PG
Sbjct:   43 EEALDAK-KEVEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVE------NDIKGNVINMS-SVHEMIPWPLFVHYAASKGGMKLMTETLALEY-APKGIRVNNIGPG 189          

HSP 2 Score: 30.8018 bits (68), Expect = 1.137e-12
Identity = 13/28 (46.43%), Postives = 20/28 (71.43%), Query Frame = 2
Query:    2 LKGKVALITGGGSGIGFEISTQFGKHGA 85
            LK KV +ITGG +G+G  ++ +FG+  A
Sbjct:    5 LKDKVVVITGGSTGLGRAMAVRFGQEEA 32          
BLAST of CF510000 vs. ExPASy Swiss-Prot
Match: DHG3_BACME (Glucose 1-dehydrogenase 3 OS=Bacillus megaterium GN=gdhIII PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.137e-12
Identity = 45/156 (28.85%), Postives = 76/156 (48.72%), Query Frame = 3
Query:  111 KQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASW-YQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPG 575
            ++ LDA    +   G +A+  +GDV ++E    +V++  + FG LD+++N A     V + +LS + +  V+D +  G F    EA+KY  +            ++N+S ++H    W   +H          +T  LALE+ A   IRVN I PG
Sbjct:   43 EEALDAK-KEVEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVE------NDIKGNVINMS-SVHEMIPWPLFVHYAASKGGMKQMTETLALEY-APKGIRVNNIGPG 189          

HSP 2 Score: 30.8018 bits (68), Expect = 1.137e-12
Identity = 13/28 (46.43%), Postives = 20/28 (71.43%), Query Frame = 2
Query:    2 LKGKVALITGGGSGIGFEISTQFGKHGA 85
            LK KV +ITGG +G+G  ++ +FG+  A
Sbjct:    5 LKDKVVVITGGSTGLGRAMAVRFGQEEA 32          
BLAST of CF510000 vs. ExPASy Swiss-Prot
Match: YWC4_CAEEL (Uncharacterized oxidoreductase W01C9.4 OS=Caenorhabditis elegans GN=W01C9.4 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.468e-12
Identity = 46/170 (27.06%), Postives = 78/170 (45.88%), Query Frame = 3
Query:   75 NMEPSVAIMGRRKQVLDAAVSALRSL-GIKAVGFEGDVRRQEHAKKVVESTFEHFGKL-DILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGP 578
            ++  +V I  RR + L+     +  + G     F+ D++         +     FGK+ +ILVN AAGNF+++ E LS N + T++DI   GTF +  E  K                I +I+A      + + +           +T++LA EW + Y +R N ++PGP
Sbjct:   47 HLRATVVIAARRMEKLEQTARDITKITGGTCEPFQMDIKDPGMVSDAFDKIDMKFGKVPEILVNNAAGNFIMATELLSSNAYGTIIDIVLKGTFNVTTELGK------RCIQNKTGASITSITAGYARAGAPFIVPSAVSKAGVETMTKSLATEW-SKYGLRFNAVSPGP 209          

HSP 2 Score: 33.4982 bits (75), Expect = 1.468e-12
Identity = 14/22 (63.64%), Postives = 18/22 (81.82%), Query Frame = 2
Query:    5 KGKVALITGGGSGIGFEISTQF 70
            KGK+ L+TGGG+GIG  I+T F
Sbjct:   24 KGKLVLVTGGGTGIGKAIATTF 45          
The following BLAST results are available for this feature:
BLAST of CF510000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
PECR_RAT2.905e-1429.82Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus ... [more]
PECR_PONAB6.370e-1427.98Peroxisomal trans-2-enoyl-CoA reductase OS=Pongo a... [more]
DHG2_BACSU6.403e-1429.61Glucose 1-dehydrogenase 2 OS=Bacillus subtilis GN=... [more]
DECR_HUMAN1.809e-1330.862,4-dienoyl-CoA reductase, mitochondrial OS=Homo s... [more]
PECR_HUMAN3.976e-1327.98Peroxisomal trans-2-enoyl-CoA reductase OS=Homo sa... [more]
GRDH2_ARATH5.173e-1333.83Glucose and ribitol dehydrogenase homolog 2 OS=Ara... [more]
DHGA_BACME1.137e-1228.85Glucose 1-dehydrogenase A OS=Bacillus megaterium G... [more]
DHG4_BACME1.137e-1228.85Glucose 1-dehydrogenase 4 OS=Bacillus megaterium G... [more]
DHG3_BACME1.137e-1228.85Glucose 1-dehydrogenase 3 OS=Bacillus megaterium G... [more]
YWC4_CAEEL1.468e-1227.06Uncharacterized oxidoreductase W01C9.4 OS=Caenorha... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-515 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-83_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510000 ID=CF510000; Name=CF510000; organism=Citrus sinensis; type=EST; length=578bp
ATTGAAAGGCAAAGTCGCTTTGATCACAGGAGGTGGTTCGGGAATTGGGT
TTGAGATATCAACCCAATTCGGTAAACATGGAGCCTTCAGTTGCAATCAT
GGGACGTCGCAAGCAAGTCCTTGATGCTGCTGTTTCTGCTCTTCGGTCTC
TTGGAATCAAGGCTGTTGGCTTTGAAGGAGATGTTCGTAGGCAGGAACAT
GCGAAAAAAGTTGTGGAATCAACTTTTGAGCATTTTGGGAAGCTTGACAT
TCTTGTGAATGCTGCGGCCGGCAACTTTCTTGTATCAGCTGAGGATTTGT
CCCCTAATGGGTTTCGAACAGTTATGGATATTGATTCTGTCGGCACATTC
ACAATGTGCCATGAAGCACTTAAATATCTTAAAAAAGGTGGACCTGGGAG
AAGCTCAGCTGGTGGTGGATCCATTTTGAACATTAGTGCTACTTTACATT
ATACAGCTTCTTGGTACCAAATACATGTAGCTGCAGCCAAGGCAGCTGTT
GATGCCATTACCAGAAACTTGGCACTGGAATGGGGAGCTGACTATGATAT
TCGAGTCAATGGAATTGCCCCAGGCCCC
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