CF510000

Overview
NameCF510000
Unique NameCF510000
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length578
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510000 vs. ExPASy Swiss-Prot
Match: YHDF_BACSU (Uncharacterized oxidoreductase yhdF OS=Bacillus subtilis GN=yhdF PE=3 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.472e-12
Identity = 46/147 (31.29%), Postives = 66/147 (44.90%), Query Frame = 3
Query:  156 IKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGN------FLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGP 578
            ++ +   GDV  + H ++ V+ T +HFGKLDILVN AA          +S E L    FRT    +    F M  +AL +L++            I+N ++   Y      I            TR++A    AD  IRVN +APGP
Sbjct:   95 VRCLLIPGDVGDENHCEQAVQQTVDHFGKLDILVNNAAEQHPQDSILNISTEQLEKT-FRT----NIFSMFHMTKKALPHLQE---------GCAIINTTSITAYEGDTALIDYSSTKGAIVSFTRSMAKSL-ADKGIRVNAVAPGP 226          

HSP 2 Score: 37.3502 bits (85), Expect = 1.472e-12
Identity = 18/28 (64.29%), Postives = 20/28 (71.43%), Query Frame = 2
Query:    2 LKGKVALITGGGSGIGFEISTQFGKHGA 85
            LKGKVA+ITGG SGIG   +  F K GA
Sbjct:   43 LKGKVAIITGGDSGIGRAAAIAFAKEGA 70          
BLAST of CF510000 vs. ExPASy Swiss-Prot
Match: DECR_RAT (2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus GN=Decr1 PE=1 SV=2)

HSP 1 Score: 60.8474 bits (146), Expect = 1.902e-12
Identity = 50/162 (30.86%), Postives = 70/162 (43.21%), Query Frame = 3
Query:   96 IMGRRKQVLDAAVSALRS-LGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGP 578
            I  R   VL A    + S  G K      DVR  +     V    +  G  D+++N AAGNF+  +E LSPNG++T+ DI   GT  +  E  K L K             L I+     + S + +           + ++LA EWG  Y +R N I PGP
Sbjct:   88 IASRNIDVLKATAEEITSKTGNKVYAIRCDVRDPDMVHNTVLELIKVAGHPDVVINNAAGNFISPSERLSPNGWKTITDIVLNGTAYVTIEIGKQLIK------AQKGAAFLAITTIYAESGSGFVMPSSSAKSGVEAMNKSLAAEWGR-YGMRFNIIQPGP 242          

HSP 2 Score: 31.187 bits (69), Expect = 1.902e-12
Identity = 14/27 (51.85%), Postives = 19/27 (70.37%), Query Frame = 2
Query:    5 KGKVALITGGGSGIGFEISTQFGKHGA 85
            +GKVA ITGGG+G+G  ++T     GA
Sbjct:   58 QGKVAFITGGGTGLGKAMTTFLSSLGA 84          
BLAST of CF510000 vs. ExPASy Swiss-Prot
Match: DHG1_BACME (Glucose 1-dehydrogenase 1 OS=Bacillus megaterium GN=gdhI PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.918e-12
Identity = 43/157 (27.39%), Postives = 80/157 (50.96%), Query Frame = 3
Query:  108 RKQVLDAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASW-YQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPG 575
            +++  ++ +  ++ +G +A+  +GDV  +     +V+S+ + FGKLD+++N A     VS+ ++S + +  V+D +  G F    EA+KY  +            ++N+S ++H    W   +H          +T  LALE+ A   IRVN I PG
Sbjct:   41 KEEEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSSIKEFGKLDVMINNAGMENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVE------NDIKGTVINMS-SVHEKIPWPLFVHYAASKGGMKLMTETLALEY-APKGIRVNNIGPG 189          

HSP 2 Score: 26.1794 bits (56), Expect = 1.918e-12
Identity = 11/28 (39.29%), Postives = 18/28 (64.29%), Query Frame = 2
Query:    2 LKGKVALITGGGSGIGFEISTQFGKHGA 85
            L+GKV +ITG  +G+G  ++ +F    A
Sbjct:    5 LEGKVVVITGSSTGLGKAMAIRFATEKA 32          
BLAST of CF510000 vs. ExPASy Swiss-Prot
Match: DHGB_BACME (Glucose 1-dehydrogenase B OS=Bacillus megaterium GN=gdhB PE=1 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 1.918e-12
Identity = 42/146 (28.77%), Postives = 72/146 (49.32%), Query Frame = 3
Query:  141 LRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASW-YQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPG 575
            ++ +G +A+  +GDV  +     +V+S  + FGKLD+++N A     VS+ ++S + +  V+D +  G F    EA+KY  +            ++N+S+   +   W   +H          +T  LALE+ A   IRVN I PG
Sbjct:   53 IKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGMENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVE------NDIKGTVINMSSVHEWKIPWPLFVHYAASKGGMKLMTETLALEY-APKGIRVNNIGPG 191          

HSP 2 Score: 26.5646 bits (57), Expect = 1.918e-12
Identity = 11/28 (39.29%), Postives = 18/28 (64.29%), Query Frame = 2
Query:    2 LKGKVALITGGGSGIGFEISTQFGKHGA 85
            L+GKV +ITG  +G+G  ++ +F    A
Sbjct:    5 LEGKVVVITGSSTGLGKSMAIRFATEKA 32          
BLAST of CF510000 vs. ExPASy Swiss-Prot
Match: DHG_BACSU (Glucose 1-dehydrogenase OS=Bacillus subtilis GN=gdh PE=2 SV=2)

HSP 1 Score: 58.5362 bits (140), Expect = 3.235e-12
Identity = 42/142 (29.58%), Postives = 68/142 (47.89%), Query Frame = 3
Query:  153 GIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASW-YQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPG 575
            G +AV  +GDV ++E  K +V++  + FG LDI++N A     V + ++    +  V+  +  G F    EA+KY  +            ++N+S ++H    W   +H          +T  LALE+ A   IRVN I PG
Sbjct:   56 GGEAVVVQGDVTKEEDVKNIVQTAIKEFGTLDIMINNAGLENPVPSHEMPLKDWDKVIGTNLTGAFLGSREAIKYFVE------NDIKGNVINMS-SVHEVIPWPLFVHYAASKGGIKLMTETLALEY-APKGIRVNNIGPG 189          

HSP 2 Score: 32.7278 bits (73), Expect = 3.235e-12
Identity = 15/28 (53.57%), Postives = 19/28 (67.86%), Query Frame = 2
Query:    2 LKGKVALITGGGSGIGFEISTQFGKHGA 85
            LKGKV  ITG  SG+G  ++ +FGK  A
Sbjct:    5 LKGKVVAITGAASGLGKAMAIRFGKEQA 32          
BLAST of CF510000 vs. ExPASy Swiss-Prot
Match: Y325_THEMA (Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima GN=TM_0325 PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 3.240e-12
Identity = 44/148 (29.73%), Postives = 72/148 (48.65%), Query Frame = 3
Query:  132 VSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPG 575
            V  ++S+G +A    GDV +   A+++V+ T E FG+LDILVN A      + E+ S   F   M ++  G F +   A++ +KK            I+N+S+         +            +TR+LA+++  DY IRVN + PG
Sbjct:   46 VELIKSMGGEAAFIFGDVAKD--AEQIVKKTVETFGRLDILVNNAGIVPYGNIEETSEEDFDKTMAVNVKGPFLLSKYAVEQMKK-------QGGGVIVNVSSEAGLIGIPRRCVYSVSKAALLGLTRSLAVDY-VDYGIRVNAVCPG 183          

HSP 2 Score: 33.8834 bits (76), Expect = 3.240e-12
Identity = 15/27 (55.56%), Postives = 19/27 (70.37%), Query Frame = 2
Query:    5 KGKVALITGGGSGIGFEISTQFGKHGA 85
            +GKV LITG GSGIG + +  F + GA
Sbjct:    4 QGKVVLITGAGSGIGKKAAVMFAERGA 30          
BLAST of CF510000 vs. ExPASy Swiss-Prot
Match: DHG_BACME (Glucose 1-dehydrogenase OS=Bacillus megaterium PE=1 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.201e-12
Identity = 43/152 (28.29%), Postives = 76/152 (50.00%), Query Frame = 3
Query:  123 DAAVSALRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASW-YQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPG 575
            ++ +  ++ +G +A+  +GDV  +     +V+S  + FGKLD+++N A     VS+ ++S + +  V+D +  G F    EA+KY  +            ++N+S ++H    W   +H          +T  LALE+ A   IRVN I PG
Sbjct:   46 NSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVE------NDIKGTVINMS-SVHEKIPWPLFVHYAASKGGMKLMTETLALEY-APKGIRVNNIGPG 189          

HSP 2 Score: 26.5646 bits (57), Expect = 4.201e-12
Identity = 11/28 (39.29%), Postives = 18/28 (64.29%), Query Frame = 2
Query:    2 LKGKVALITGGGSGIGFEISTQFGKHGA 85
            L+GKV +ITG  +G+G  ++ +F    A
Sbjct:    5 LEGKVVVITGSSTGLGKSMAIRFATEKA 32          
BLAST of CF510000 vs. ExPASy Swiss-Prot
Match: PECR_CAVPO (Peroxisomal trans-2-enoyl-CoA reductase OS=Cavia porcellus GN=PECR PE=1 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 5.428e-12
Identity = 49/168 (29.17%), Postives = 76/168 (45.24%), Query Frame = 3
Query:   87 SVAIMGRRKQVLDAAVSALR-----SLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPG 575
            +V I  R+   L AA   L+     S   +    + ++R++E    +++ST   +GK+D LVN   G F  S E +S  G+  V++ +  GTF MC  A     K            I+NI   L+     +  H          +T++LAL W A   IR+N +APG
Sbjct:   44 NVVIASRKFDRLRAAAEELKATLPPSNKAEVTPIQCNIRKEEEVNNLMKSTLALYGKIDFLVNNGGGQFWSSPEHISSKGWHAVIETNLTGTFYMCKAAYNSWMK-------EHGGAIVNIIILLN--GQPFVAHSGAARGGVYNLTKSLALGW-ARSGIRINCVAPG 201          

HSP 2 Score: 26.9498 bits (58), Expect = 5.428e-12
Identity = 10/22 (45.45%), Postives = 17/22 (77.27%), Query Frame = 2
Query:    2 LKGKVALITGGGSGIGFEISTQ 67
            L+ + A++TGGG+GIG  I+ +
Sbjct:   16 LQNRAAIVTGGGTGIGKAIAKE 37          
BLAST of CF510000 vs. ExPASy Swiss-Prot
Match: DHG2_BACME (Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 5.455e-12
Identity = 43/146 (29.45%), Postives = 69/146 (47.26%), Query Frame = 3
Query:  141 LRSLGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASW-YQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPG 575
            +   G +A+   GDV ++E    +VE+  + FG LD+++N A     V + +LS   +  V+D +  G F    EA+KY  +            ++N+S ++H    W   +H          +T  LALE+ A   IRVN I PG
Sbjct:   52 IEEAGGQAIIVRGDVTKEEDVVNLVETAVKEFGSLDVMINNAGVENPVPSHELSLENWNQVIDTNLTGAFLGSREAIKYFVE------NDIKGNVINMS-SVHEMIPWPLFVHYAASKGGMKLMTETLALEY-APKGIRVNNIGPG 189          

HSP 2 Score: 29.261 bits (64), Expect = 5.455e-12
Identity = 11/25 (44.00%), Postives = 18/25 (72.00%), Query Frame = 2
Query:    2 LKGKVALITGGGSGIGFEISTQFGK 76
            LK KV ++TGG  G+G  ++ +FG+
Sbjct:    5 LKDKVVVVTGGSKGLGRAMAVRFGQ 29          
BLAST of CF510000 vs. ExPASy Swiss-Prot
Match: DECR_MOUSE (2,4-dienoyl-CoA reductase, mitochondrial OS=Mus musculus GN=Decr1 PE=1 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 9.119e-12
Identity = 49/162 (30.25%), Postives = 70/162 (43.21%), Query Frame = 3
Query:   96 IMGRRKQVLDAAVSALRS-LGIKAVGFEGDVRRQEHAKKVVESTFEHFGKLDILVNAAAGNFLVSAEDLSPNGFRTVMDIDSVGTFTMCHEALKYLKKXXXXXXXXXXXXILNISATLHYTASWYQIHXXXXXXXXXXITRNLALEWGADYDIRVNGIAPGP 578
            I  R   VL A    + S  G K      DVR  +     V    +  G  D+++N AAGNF+  +E L+PNG++T+ DI   GT  +  E  K L K             L I+     + S + +           + ++LA EWG  Y +R N I PGP
Sbjct:   88 IASRNIDVLKATAEEISSKTGNKVHAIRCDVRDPDMVHNTVLELIKVAGHPDVVINNAAGNFISPSERLTPNGWKTITDIVLNGTAYVTLEIGKQLIK------AQKGAAFLAITTIYAESGSGFVMPSSSAKSGVEAMNKSLAAEWGR-YGMRFNIIQPGP 242          

HSP 2 Score: 30.8018 bits (68), Expect = 9.119e-12
Identity = 14/27 (51.85%), Postives = 19/27 (70.37%), Query Frame = 2
Query:    5 KGKVALITGGGSGIGFEISTQFGKHGA 85
            +GKVA ITGGG+G+G  ++T     GA
Sbjct:   58 QGKVAFITGGGTGLGKAMTTFLSTLGA 84          
The following BLAST results are available for this feature:
BLAST of CF510000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
YHDF_BACSU1.472e-1231.29Uncharacterized oxidoreductase yhdF OS=Bacillus su... [more]
DECR_RAT1.902e-1230.862,4-dienoyl-CoA reductase, mitochondrial OS=Rattus... [more]
DHG1_BACME1.918e-1227.39Glucose 1-dehydrogenase 1 OS=Bacillus megaterium G... [more]
DHGB_BACME1.918e-1228.77Glucose 1-dehydrogenase B OS=Bacillus megaterium G... [more]
DHG_BACSU3.235e-1229.58Glucose 1-dehydrogenase OS=Bacillus subtilis GN=gd... [more]
Y325_THEMA3.240e-1229.73Uncharacterized oxidoreductase TM_0325 OS=Thermoto... [more]
DHG_BACME4.201e-1228.29Glucose 1-dehydrogenase OS=Bacillus megaterium PE=... [more]
PECR_CAVPO5.428e-1229.17Peroxisomal trans-2-enoyl-CoA reductase OS=Cavia p... [more]
DHG2_BACME5.455e-1229.45Glucose 1-dehydrogenase 2 OS=Bacillus megaterium G... [more]
DECR_MOUSE9.119e-1230.252,4-dienoyl-CoA reductase, mitochondrial OS=Mus mu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-515 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-83_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510000 ID=CF510000; Name=CF510000; organism=Citrus sinensis; type=EST; length=578bp
ATTGAAAGGCAAAGTCGCTTTGATCACAGGAGGTGGTTCGGGAATTGGGT
TTGAGATATCAACCCAATTCGGTAAACATGGAGCCTTCAGTTGCAATCAT
GGGACGTCGCAAGCAAGTCCTTGATGCTGCTGTTTCTGCTCTTCGGTCTC
TTGGAATCAAGGCTGTTGGCTTTGAAGGAGATGTTCGTAGGCAGGAACAT
GCGAAAAAAGTTGTGGAATCAACTTTTGAGCATTTTGGGAAGCTTGACAT
TCTTGTGAATGCTGCGGCCGGCAACTTTCTTGTATCAGCTGAGGATTTGT
CCCCTAATGGGTTTCGAACAGTTATGGATATTGATTCTGTCGGCACATTC
ACAATGTGCCATGAAGCACTTAAATATCTTAAAAAAGGTGGACCTGGGAG
AAGCTCAGCTGGTGGTGGATCCATTTTGAACATTAGTGCTACTTTACATT
ATACAGCTTCTTGGTACCAAATACATGTAGCTGCAGCCAAGGCAGCTGTT
GATGCCATTACCAGAAACTTGGCACTGGAATGGGGAGCTGACTATGATAT
TCGAGTCAATGGAATTGCCCCAGGCCCC
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