CF510001

Overview
NameCF510001
Unique NameCF510001
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length426
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.791e-21
Identity = 61/154 (39.61%), Postives = 91/154 (59.09%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCT--------SRYSQGLLLVYEFVANGTVADQL--HGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVK++ ++ ++   +F NEVEI++ L+H+NLV L GC+         RY     LVY++++NG + D L   G+  K  L +WP R +I ++ A  LAYLH      I HRD+K  NILLD +   +VADFGL++      +H++T   GT GY
Sbjct:  321 AVKKVIESEFQGDAEFRNEVEIISNLKHRNLVPLRGCSMVDDDSESQRY-----LVYDYMSNGNLDDHLFPRGETTKMPL-SWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREGESHLTTRVAGTHGY 468          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.646e-21
Identity = 56/145 (38.62%), Postives = 86/145 (59.31%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHG-DRAKHGLLTWPIRMNIAIETASALAYLHASD---IIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVK+L   + +   +F+NE+ +++ L+H NLV L+GC    +Q L+LVYE++ N  ++  L G D +    L W  R  I +  A  L +LH      I+HRD+K +N+LLD +   K++DFGL++L     TH+ST   GT GY
Sbjct:  704 AVKQLSAKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQ-LILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHISTRIAGTIGY 847          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.646e-21
Identity = 58/145 (40.00%), Postives = 84/145 (57.93%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASD---IIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAP-QGTPGY 425
            AVKRL   + +  ++FMNEV ++ RL+H NLV + GC     + +L +YE++ N ++   L G + +   L W  R +I    A  L YLH      IIHRD+K +NILLD N   K++DFG++R+F  D T  +T    GT GY
Sbjct:  554 AVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKML-IYEYLENLSLDSYLFG-KTRRSKLNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKNMIPKISDFGMARIFERDETEANTMKVVGTYGY 696          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 3.646e-21
Identity = 64/145 (44.14%), Postives = 87/145 (60.00%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVE-QFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA---SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVKRL +   +  E QF  EVE+++   H+NL+ L G     ++ LL VY ++ANG+VA  L      +  L WP R +IA+ +A  LAYLH      IIHRDVK  NILLD  F   V DFGL++L   + +HV+TA +GT G+
Sbjct:  320 AVKRLKEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL-VYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGH 463          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.646e-21
Identity = 58/145 (40.00%), Postives = 89/145 (61.38%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG-LLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVK++  ++ + V +F+ E+E L +LRHKNLV+L G   ++   LLL+Y+++ NG++   L+    + G +L+W  R  IA   AS L YLH      +IHRDVK +N+L+DS    ++ DFGL+RL+       +TA  GT GY
Sbjct:  393 AVKKIIPSSRQGVREFVAEIESLGKLRHKNLVNLQGWC-KHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERGTLSETTALVGTIGY 536          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 3.646e-21
Identity = 65/145 (44.83%), Postives = 84/145 (57.93%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVE-QFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVKRL +   +  E QF  EVE+++   H+NL+ L G     ++ LL VY ++ANG+VA  L         L WP R  IA+ +A  LAYLH      IIHRDVK  NILLD  F   V DFGL++L     THV+TA +GT G+
Sbjct:  315 AVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL-VYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGH 458          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.761e-21
Identity = 60/145 (41.38%), Postives = 85/145 (58.62%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASD---IIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVST-APQGTPGY 425
            AVKRL   + + V++F NE  ++ +L+H+NLV + G      +  +LVYEFV N ++ DQ   +  K G L W  R  I + TA  + YLH      IIHRD+K +NILLD+    KVADFG++R+F +D +   T    GT GY
Sbjct:  347 AVKRLSKESAQGVQEFQNETSLVAKLQHRNLVGVLGFCME-GEEKILVYEFVPNKSL-DQFLFEPTKKGQLDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILLDAEMEPKVADFGMARIFRVDQSRADTRRVVGTHGY 489          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.761e-21
Identity = 56/144 (38.89%), Postives = 90/144 (62.50%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS--DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGY 425
            AVK+L    ++   +++ E+  L +L H NLV L G      +  LLVYEF+  G++ + L    A    L W +R+N+A++ A  LA+LH+    +I+RD+K +NILLD+++  K++DFGL+R  P+ D+++VST   GT GY
Sbjct:  103 AVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLE-DEHRLLVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSDPVKVIYRDIKASNILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGY 245          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: Y5005_ARATH (Probable receptor-like protein kinase At5g20050 OS=Arabidopsis thaliana GN=At5g20050 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.219e-21
Identity = 62/151 (41.06%), Postives = 85/151 (56.29%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGL--LLVYEFVANGTVADQLHGDRAKHG-----LLTWPIRMNIAIETASALAYLH---ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVKR+ +   +   +F +EV  +  ++HKNLV L+G +S  S      LVY+++ N ++   +  DR   G      L+W  R  +AI+ A ALAYLH    S I+H DVK  NILLD NF   V DFGLS+L   D + V T  +GT GY
Sbjct:  129 AVKRI-EGEEKGEREFRSEVAAIASVQHKNLVRLYGYSSSTSANRPRFLVYDYIVNSSLDIWIFPDRGNRGRSGGGCLSWEQRYQVAIDVAKALAYLHHDCRSKILHLDVKPENILLDENFRAVVTDFGLSKLIARDESRVLTDIRGTRGY 278          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.219e-21
Identity = 52/108 (48.15%), Postives = 72/108 (66.67%), Query Frame = 3
Query:   48 FMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGL 362
            F +E+EIL ++RH N+V+L G  S   + LL VYE++ +GT+ D LHGD ++   L W +R+ I ++ A  L YLH      IIHRDVKT+NILLD   C ++ADFGL
Sbjct:  562 FESELEILCKIRHNNIVNLLGYCSEMGERLL-VYEYMPHGTLHDHLHGDLSQ---LDWSMRLKIMLQAARGLDYLHNEVDPPIIHRDVKTSNILLDGEMCARIADFGL 665          
The following BLAST results are available for this feature:
BLAST of CF510001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 451
Match NameE-valueIdentityDescription
Y1105_ARATH2.791e-2139.61Probable receptor-like protein kinase At1g11050 OS... [more]
Y1765_ARATH3.646e-2138.62Probable LRR receptor-like serine/threonine-protei... [more]
SRK6_BRAOE3.646e-2140.00Putative serine/threonine-protein kinase receptor ... [more]
SERK4_ARATH3.646e-2144.14Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
LRKA1_ARATH3.646e-2140.00Lectin-domain containing receptor kinase A4.1 OS=A... [more]
BAK1_ARATH3.646e-2144.83BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
CRK33_ARATH4.761e-2141.38Putative cysteine-rich receptor-like protein kinas... [more]
BIK1_ARATH4.761e-2138.89Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
Y5005_ARATH6.219e-2141.06Probable receptor-like protein kinase At5g20050 OS... [more]
ACCR2_ARATH6.219e-2148.15Serine/threonine-protein kinase-like protein CCR2 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-516 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-83_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510001 ID=CF510001; Name=CF510001; organism=Citrus sinensis; type=EST; length=426bp
TTGCAGTCAAGCGCCTATATGACAACAACTACAGAAGGGTTGAACAATTT
ATGAATGAAGTTGAAATCCTCACACGTTTGCGCCACAAAAATCTTGTCTC
CCTTTTTGGCTGCACCTCTCGTTACAGTCAGGGTCTCCTACTTGTGTATG
AATTTGTTGCCAATGGCACTGTTGCGGATCAACTCCATGGTGATCGAGCT
AAGCATGGTTTGCTGACATGGCCTATCCGTATGAACATTGCCATAGAAAC
TGCCAGTGCATTGGCATATCTTCATGCTTCTGATATCATTCATCGTGATG
TGAAGACTAACAACATTCTCCTTGACAGCAATTTTTGTGTCAAAGTTGCA
GATTTTGGGCTTTCGCGATTGTTCCCTTTAGATGTTACTCACGTCTCAAC
TGCACCACAAGGAACTCCAGGCTATG
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