CF510001

Overview
NameCF510001
Unique NameCF510001
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length426
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.690e-26
Identity = 67/145 (46.21%), Postives = 94/145 (64.83%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGY 425
            AVK L +++ +  +QF  EV++L R+ H NLV+L G      Q L+L+YE+++NG +   L G+ ++  L +W  R+ IA ETA  L YLH      +IHRD+K+ NILLD+NF  K+ DFGLSR FP+   THVST   G+PGY
Sbjct:  617 AVKVLSESSAQGYKQFKAEVDLLLRVHHINLVTLVGYCDE-GQHLVLIYEYMSNGNLKQHLSGENSRSPL-SWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGY 759          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 1.690e-26
Identity = 60/144 (41.67%), Postives = 94/144 (65.28%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVKR    +  ++E+F+NE+ +L+++ H+N+V L GC    ++  +LVYE++ NG +  +LH D     ++TW +R+ IA+E A AL+Y+H++    I HRD+KT NILLD  +  K++DFG SR    D TH++T   GT GY
Sbjct:  454 AVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLE-TEVPILVYEYIPNGDLFKRLH-DEYDDYMMTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTHLTTLVAGTFGY 595          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.882e-26
Identity = 68/145 (46.90%), Postives = 91/145 (62.76%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASD---IIHRDVKTNNILLDSNFCVKVADFGLSRLFPLD-VTHVSTAPQGTPGY 425
            AVK L  ++ +  +QF  EVE+L R+ HKNLV L G      + L L+YE++ANG + + + G R    +L W  R+ IA+E A  L YLH      ++HRDVKT NILL+ +F  K+ADFGLSR FP++  THVST   GT GY
Sbjct:  603 AVKMLSHSSAQGYKQFKAEVELLLRVHHKNLVGLVGYCEEGDK-LALIYEYMANGDLDEHMSGKRGG-SILNWGTRLKIALEAAQGLEYLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGY 745          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.882e-26
Identity = 64/145 (44.14%), Postives = 90/145 (62.07%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVK+L +N  +  ++F  EVE +  +RHKNLV L G C     +  +LVYE+V +G +   LHG   +HG LTW  RM I   TA ALAYLH +    ++HRD+K +NIL+D  F  K++DFGL++L     +H++T   GT GY
Sbjct:  209 AVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHR--MLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTFGY 351          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.882e-26
Identity = 66/145 (45.52%), Postives = 94/145 (64.83%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASD---IIHRDVKTNNILLDSNFCVKVADFGLSRLFP-LDVTHVSTAPQGTPGY 425
            A+KR   ++ + + +F  E+ +L+RLRH++LVSL G    +++ ++LVYE++ANGT+   L G       L+W  R+   I +A  L YLH      IIHRDVKT NILLD NF  K++DFGLS+  P +D THVSTA +G+ GY
Sbjct:  546 AIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNE-MILVYEYMANGTLRSHLFGSNLPP--LSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGY 687          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 2.882e-26
Identity = 65/145 (44.83%), Postives = 91/145 (62.76%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVK L +N  +  ++F  EVE++ R+RHKNLV L G C     +  +LVY+FV NG +   +HGD      LTW IRMNI +  A  LAYLH      ++HRD+K++NILLD  +  KV+DFGL++L   + ++V+T   GT GY
Sbjct:  180 AVKNLLNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYR--MLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGY 322          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 3.764e-26
Identity = 67/145 (46.21%), Postives = 90/145 (62.07%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLD-VTHVSTAPQGTPGY 425
            AVK L  ++ +  ++F  EVE+L R+ H++LV L G        L L+YE++ANG + + + G R  + +LTW  RM IA+E A  L YLH      ++HRDVKT NILL+     K+ADFGLSR FP+D   HVST   GTPGY
Sbjct:  609 AVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDD-GDNLALIYEYMANGDLRENMSGKRGGN-VLTWENRMQIAVEAAQGLEYLHNGCRPPMVHRDVKTTNILLNERCGAKLADFGLSRSFPIDGECHVSTVVAGTPGY 751          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.764e-26
Identity = 67/144 (46.53%), Postives = 87/144 (60.42%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASD---IIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVKRL+ NN  R   F NEV +++ + HKNLV L GC+    + LL VYE++ N ++ D+   D  +   L W  R  I + TA  L YLH      IIHRD+K +NILLDS    K+ADFGL+R F  D +H+STA  GT GY
Sbjct:  351 AVKRLFFNNRHRATDFYNEVNMISTVEHKNLVRLLGCSCSGPESLL-VYEYLQNKSL-DRFIFDVNRGKTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHISTAIAGTLGY 492          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.916e-26
Identity = 68/147 (46.26%), Postives = 95/147 (64.63%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLT--WPIRMNIAIETASALAYLHASD---IIHRDVKTNNILLDSNFCVKVADFGLSRLFP-LDVTHVSTAPQGTPGY 425
            AVKR    + + + +F  E+E+L++ RH++LVSL G     ++ ++LVYE++ NGT+   L+G     GLL+  W  R+ I I +A  L YLH  D   +IHRDVK+ NILLD N   KVADFGLS+  P +D THVSTA +G+ GY
Sbjct:  508 AVKRANPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNE-MILVYEYMENGTLKSHLYGS----GLLSLSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGY 649          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 6.420e-26
Identity = 60/144 (41.67%), Postives = 92/144 (63.89%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA---SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVK+    +  ++++F+NEV IL+++ H+++V L GC    ++  +LVYEF+ NG +   +H + A    + W +R+ IA++ A AL+YLH+   S I HRD+K+ NILLD  +  KVADFG SR   +D TH +T   GT GY
Sbjct:  470 AVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLE-TEVPILVYEFIINGNLFKHIHEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGY 612          
The following BLAST results are available for this feature:
BLAST of CF510001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 451
Match NameE-valueIdentityDescription
Y4245_ARATH1.690e-2646.21Probable LRR receptor-like serine/threonine-protei... [more]
WAKLC_ARATH1.690e-2641.67Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
Y5181_ARATH2.882e-2646.90Probable LRR receptor-like serine/threonine-protei... [more]
Y2296_ARATH2.882e-2644.14Probable receptor-like protein kinase At2g42960 OS... [more]
Y1357_ARATH2.882e-2645.52Probable receptor-like protein kinase At1g30570 OS... [more]
Y1154_ARATH2.882e-2644.83Probable serine/threonine-protein kinase At1g01540... [more]
Y1518_ARATH3.764e-2646.21Probable LRR receptor-like serine/threonine-protei... [more]
CRK2_ARATH3.764e-2646.53Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
Y5597_ARATH4.916e-2646.26Probable receptor-like protein kinase At5g59700 OS... [more]
WAKLM_ARATH6.420e-2641.67Wall-associated receptor kinase-like 17 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-516 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-83_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510001 ID=CF510001; Name=CF510001; organism=Citrus sinensis; type=EST; length=426bp
TTGCAGTCAAGCGCCTATATGACAACAACTACAGAAGGGTTGAACAATTT
ATGAATGAAGTTGAAATCCTCACACGTTTGCGCCACAAAAATCTTGTCTC
CCTTTTTGGCTGCACCTCTCGTTACAGTCAGGGTCTCCTACTTGTGTATG
AATTTGTTGCCAATGGCACTGTTGCGGATCAACTCCATGGTGATCGAGCT
AAGCATGGTTTGCTGACATGGCCTATCCGTATGAACATTGCCATAGAAAC
TGCCAGTGCATTGGCATATCTTCATGCTTCTGATATCATTCATCGTGATG
TGAAGACTAACAACATTCTCCTTGACAGCAATTTTTGTGTCAAAGTTGCA
GATTTTGGGCTTTCGCGATTGTTCCCTTTAGATGTTACTCACGTCTCAAC
TGCACCACAAGGAACTCCAGGCTATG
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