CF510001

Overview
NameCF510001
Unique NameCF510001
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length426
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.601e-24
Identity = 66/147 (44.90%), Postives = 92/147 (62.59%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-LTWPIRMNIAIETASALAYLHA---SDIIHRDVKTNNILLDSNFCVKVADFGLSRLF-PLDVTHVSTAPQGTPGY 425
            A+KR    + +   +F  E+E+L+R+ HKN+V L G C  +  Q  +LVYE++ NG++ D L G   K+G+ L W  R+ IA+ +   LAYLH      IIHRDVK+NNILLD +   KVADFGLS+L    +  HV+T  +GT GY
Sbjct:  660 AIKRAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFDQKEQ--MLVYEYIPNGSLRDGLSG---KNGVKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGY 801          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 4.601e-24
Identity = 60/132 (45.45%), Postives = 85/132 (64.39%), Query Frame = 3
Query:   42 EQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGY 425
            ++F  E E+L  + H+NL S  G      + + L+YE++ANG + D L  + A+   L+W  R++IAI++A  L YLH      I+HRDVKT NILL+ N   K+ADFGLS++FP  D++HV TA  GTPGY
Sbjct:  619 KEFQVEAELLLTVHHRNLASFVGYCDD-GRSMALIYEYMANGNLQDYLSSENAED--LSWEKRLHIAIDSAQGLEYLHHGCRPPIVHRDVKTANILLNDNLEAKIADFGLSKVFPEDDLSHVVTAVMGTPGY 747          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.601e-24
Identity = 63/144 (43.75%), Postives = 88/144 (61.11%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH---ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            A+KR    + + + +F  E+++L++LRH++LVSL G     ++ ++LVYE+++NG   D L+G       LTW  R+ I I  A  L YLH   A  IIHRDVK+ NILLD     KVADFGLS+       HVSTA +G+ GY
Sbjct:  551 AIKRGNPQSEQGITEFHTEIQMLSKLRHRHLVSLIGYCDENAE-MILVYEYMSNGPFRDHLYGKNLSP--LTWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGY 691          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.601e-24
Identity = 61/144 (42.36%), Postives = 91/144 (63.19%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH---ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            A+KRLY +N + ++QF  E+E+L+ ++H+NLVSL   +  +  G LL Y+++ NG++ D LHG   K   L W  R+ IA   A  LAYLH   +  IIHRDVK++NILLD +   ++ DFG+++   +  +H ST   GT GY
Sbjct:  674 AIKRLYSHNPQSMKQFETELEMLSSIKHRNLVSLQAYSLSHL-GSLLFYDYLENGSLWDLLHGPTKKK-TLDWDTRLKIAYGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDLEARLTDFGIAKSLCVSKSHTSTYVMGTIGY 815          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 4.601e-24
Identity = 64/144 (44.44%), Postives = 84/144 (58.33%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASD---IIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVK+L+ N     +QF NEV +++ ++HKNLV L GC+    + LL VYE+V N ++   L      H +L+W  R NI I  +  L YLH      IIHRD+KT+NILLD N   K+ADFGL R    D T  +T   GT GY
Sbjct:  344 AVKKLFFNTREWADQFFNEVNLISGVQHKNLVRLLGCSIEGPKSLL-VYEYVHNRSLDQILFMKNTVH-ILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGIAGTLGY 485          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.601e-24
Identity = 63/145 (43.45%), Postives = 92/145 (63.45%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFP-LDVTHVSTAPQGTPGY 425
            A+K+   N+ + + +F  E+E+L+RLRHK+LVSL G      + + L+Y++++ GT+ + L+    K   LTW  R+ IAI  A  L YLH      IIHRDVKT NILLD N+  KV+DFGLS+  P ++  HV+T  +G+ GY
Sbjct:  547 AIKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGE-MCLIYDYMSLGTLREHLYN--TKRPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGY 688          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 6.009e-24
Identity = 65/147 (44.22%), Postives = 89/147 (60.54%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG--LLTWPIRMNIAIETASALAYLHASDI---IHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGY 425
            AVK L  ++ +  + F  EVE+L R+ H NLVSL G      + L L+YE++ NG +   L G   KHG  +L+W  R+ I ++ A  L YLH   +   +HRD+KT NILLD +   K+ADFGLSR FP+ +  +VST   GTPGY
Sbjct:  603 AVKLLSQSSSQGYKHFKAEVELLMRVHHINLVSLVGYCDE-GEHLALIYEYMPNGDLKQHLSG---KHGGFVLSWESRLKIVLDAALGLEYLHTGCVPPMVHRDIKTTNILLDQHLQAKLADFGLSRSFPIGNEKNVSTVVAGTPGY 745          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 6.009e-24
Identity = 64/145 (44.14%), Postives = 88/145 (60.69%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASD---IIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGY 425
            AVK L  ++ +  ++F  EVE+L R+ H NLVSL G        L L+Y+++ NG +     G      +++W  R+NIA++ AS L YLH      I+HRDVK++NILLD     K+ADFGLSR FP+ D +HVST   GT GY
Sbjct:  596 AVKLLSPSSAQGYKEFKTEVELLLRVYHTNLVSLVGYCDEKDH-LALIYQYMVNGDLKKHFSGS----SIISWVDRLNIAVDAASGLEYLHIGCKPLIVHRDVKSSNILLDDQLQAKLADFGLSRSFPIGDESHVSTLVAGTFGY 735          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.025e-23
Identity = 62/145 (42.76%), Postives = 91/145 (62.76%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASD----IIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            A+KR    + + + +F  E+++L+R+RH++LVSL G     S+ ++LVYEF+  GT+ + L+G       LTW  R+ I I  A  L YLH+S     IIHRDVK+ NILLD +   KVADFGLS++   D +++S   +GT GY
Sbjct:  514 AIKRGKTGSGQGILEFQTEIQVLSRIRHRHLVSLTGYCEENSE-MILVYEFMEKGTLKEHLYGSNLPS--LTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLDEHNIAKVADFGLSKIHNQDESNISINIKGTFGY 655          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.025e-23
Identity = 59/144 (40.97%), Postives = 90/144 (62.50%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA---SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVK+    +  ++++F+NEV IL+++ H+++V L GC    ++  +LVYEF+ NG +   LH +   +  L W +RM IA++ + A +YLH    S I HRD+K+ NILLD  +  KV+DFG SR   +D TH +T   GT GY
Sbjct:  480 AVKKSNVVDEDKLQEFINEVIILSQINHRHVVKLLGCCLE-TEVPILVYEFIPNGNLFQHLHEEFDDYTAL-WGVRMRIAVDISGAFSYLHTAACSPIYHRDIKSTNILLDEKYRAKVSDFGTSRSVSIDHTHWTTVISGTVGY 621          
The following BLAST results are available for this feature:
BLAST of CF510001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 451
Match NameE-valueIdentityDescription
Y5977_ARATH4.601e-2444.90Probable leucine-rich repeat receptor-like protein... [more]
Y4291_ARATH4.601e-2445.45Probable LRR receptor-like serine/threonine-protei... [more]
Y2214_ARATH4.601e-2443.75Probable receptor-like protein kinase At2g21480 OS... [more]
ERECT_ARATH4.601e-2442.36LRR receptor-like serine/threonine-protein kinase ... [more]
CRK1_ARATH4.601e-2444.44Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
ANX2_ARATH4.601e-2443.45Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
Y2899_ARATH6.009e-2444.22Probable leucine-rich repeat receptor-like protein... [more]
Y1756_ARATH6.009e-2444.14Probable LRR receptor-like serine/threonine-protei... [more]
Y2232_ARATH1.025e-2342.76Probable receptor-like protein kinase At2g23200 OS... [more]
WAKLL_ARATH1.025e-2340.97Putative wall-associated receptor kinase-like 13 O... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-516 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-83_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510001 ID=CF510001; Name=CF510001; organism=Citrus sinensis; type=EST; length=426bp
TTGCAGTCAAGCGCCTATATGACAACAACTACAGAAGGGTTGAACAATTT
ATGAATGAAGTTGAAATCCTCACACGTTTGCGCCACAAAAATCTTGTCTC
CCTTTTTGGCTGCACCTCTCGTTACAGTCAGGGTCTCCTACTTGTGTATG
AATTTGTTGCCAATGGCACTGTTGCGGATCAACTCCATGGTGATCGAGCT
AAGCATGGTTTGCTGACATGGCCTATCCGTATGAACATTGCCATAGAAAC
TGCCAGTGCATTGGCATATCTTCATGCTTCTGATATCATTCATCGTGATG
TGAAGACTAACAACATTCTCCTTGACAGCAATTTTTGTGTCAAAGTTGCA
GATTTTGGGCTTTCGCGATTGTTCCCTTTAGATGTTACTCACGTCTCAAC
TGCACCACAAGGAACTCCAGGCTATG
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