CF510001

Overview
NameCF510001
Unique NameCF510001
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length426
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.748e-23
Identity = 59/138 (42.75%), Postives = 86/138 (62.32%), Query Frame = 3
Query:   18 YDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH---ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPG 422
            Y ++    + F  EVE L  +RHK++V L+ C S      LLVYE++ NG++AD LHGDR    +L WP R+ IA++ A  L+YLH      I+HRDVK++NILLDS++  KVADFG++++  +  +    A  G  G
Sbjct:  724 YSSDSLNRDVFAAEVETLGTIRHKSIVRLWCCCSS-GDCKLLVYEYMPNGSLADVLHGDRKGGVVLGWPERLRIALDAAEGLSYLHHDCVPPIVHRDVKSSNILLDSDYGAKVADFGIAKVGQMSGSKTPEAMSGIAG 860          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.284e-23
Identity = 60/144 (41.67%), Postives = 86/144 (59.72%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH---ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            A+KR+Y+       +F  E+E +  +RH+N+VSL G       G LL Y+++ NG++ D LHG   K   L W  R+ IA+  A  LAYLH      IIHRD+K++NILLD NF  +++DFG+++  P   T+ ST   GT GY
Sbjct:  677 AIKRIYNQYPSNFREFETELETIGSIRHRNIVSLHGYALS-PFGNLLFYDYMENGSLWDLLHGP-GKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDGNFEARLSDFGIAKSIPATKTYASTYVLGTIGY 818          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.982e-23
Identity = 65/150 (43.33%), Postives = 92/150 (61.33%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLD-----VTHVSTAPQGTPGY 425
            AVKR    + +  ++F  E+E+L+RL H+NLVSL G C  +  Q  +LVYE++ NG++ D L     +   L+  +R+ IA+ +A  + YLH      IIHRD+K +NILLDS    KVADFG+S+L  LD       HV+T  +GTPGY
Sbjct:  657 AVKRAEQGSLQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQ--MLVYEYMPNGSLQDALSARFRQP--LSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGTPGY 802          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.982e-23
Identity = 64/145 (44.14%), Postives = 88/145 (60.69%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHA---SDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVK+L  +     ++F  EVE+L+R +H+NLV+L G C   +    +L+Y F+ NG++   LH +      L WP R+NI    +S LAY+H      I+HRD+K++NILLD NF   VADFGLSRL     THV+T   GT GY
Sbjct:  829 AVKKLTGDYGMMEKEFKAEVEVLSRAKHENLVALQGYCV--HDSARILIYSFMENGSLDYWLHENPEGPAQLDWPKRLNIMRGASSGLAYMHQICEPHIVHRDIKSSNILLDGNFKAYVADFGLSRLILPYRTHVTTELVGTLGY 971          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.895e-23
Identity = 68/145 (46.90%), Postives = 83/145 (57.24%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASD---IIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAP-QGTPGY 425
            AVKRL   + +   +F NEV +LTRL+HKNLV L G  +   + +L VYEFV N ++ D    D  K  LLTW +R  I    A  L YLH      IIHRD+K +NILLD+    KVADFG +RLF  D T   T    GT GY
Sbjct:  374 AVKRLTKGSGQGDMEFKNEVSLLTRLQHKNLVKLLGFCNEGDEEIL-VYEFVPNSSL-DHFIFDEDKRSLLTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGY 516          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 5.087e-23
Identity = 61/145 (42.07%), Postives = 87/145 (60.00%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLD-VTHVSTAPQGTPGY 425
            AVK L  ++ +  ++F  EVE+L R+ H++LV L G        L L+YE++  G + + + G  + + +L+W  RM IA+E A  L YLH      ++HRDVK  NILL+     K+ADFGLSR FP+D  +HV T   GTPGY
Sbjct:  595 AVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDD-GDNLALIYEYMEKGDLRENMSGKHSVN-VLSWETRMQIAVEAAQGLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGY 737          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 5.087e-23
Identity = 67/147 (45.58%), Postives = 88/147 (59.86%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFG--CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLD-VTHVSTAPQGTPGY 425
            AVK L  ++ +  ++F  EV++L R+ H NLVSL G  C   Y   L LVYEF+ NG +   L G +  + ++ W IR+ IA+E A  L YLH      ++HRDVKT NILLD NF  K+ADFGLSR F  +  +  ST   GT GY
Sbjct:  590 AVKVLSQSSTQGSKEFKAEVDLLLRVHHTNLVSLVGYCCEGDY---LALVYEFLPNGDLKQHLSG-KGGNSIINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADFGLSRSFQGEGESQESTTIAGTLGY 732          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.644e-23
Identity = 66/148 (44.59%), Postives = 86/148 (58.11%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG--LLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL--DVTHVSTAPQGTPGY 425
            AVK L   + +  ++F  EVE+L R+ H NLV+L G          L+YE+++NG +   L G   KHG  +L W  R+ IAIE A  L YLH      ++HRDVK+ NILLD  F  K+ADFGLSR F +  D + VST   GT GY
Sbjct:  592 AVKLLSQTSAQGYKEFKAEVELLLRVHHINLVNLVGYCDEQDH-FALIYEYMSNGDLHQHLSG---KHGGSVLNWGTRLQIAIEAALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQVSTVVAGTLGY 735          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 8.677e-23
Identity = 60/144 (41.67%), Postives = 85/144 (59.03%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASD---IIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVK L   + +   QF+ E+  ++ ++H+NLV L+GC     +  LLVYE++ NG++   L G++  H  L W  R  I +  A  L YLH      I+HRDVK +NILLDS    KV+DFGL++L+    TH+ST   GT GY
Sbjct:  719 AVKLLSVGSRQGKGQFVAEIVAISAVQHRNLVKLYGCCYE-GEHRLLVYEYLPNGSLDQALFGEKTLH--LDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHISTRVAGTIGY 859          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.677e-23
Identity = 60/141 (42.55%), Postives = 91/141 (64.54%), Query Frame = 3
Query:   30 YRRVEQ---FMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH---ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL---DVTHVSTAPQGTPGY 425
            +RR ++   F+NE+E ++RL HKNLV L G     ++  +LVYE++ NG++AD LH  +     L+W  R+ IA++ A  + YLH      +IHRD+K++NILLD+ +  KV+DFGLS++ P    DV+H+S    GT GY
Sbjct:  487 HRRADKDSAFVNELESMSRLNHKNLVRLLGFYED-TEERILVYEYMKNGSLADHLHNPQFDP--LSWQTRLMIALDAARGIQYLHEFIVPPVIHRDIKSSNILLDATWTAKVSDFGLSQMGPTEEDDVSHLSLHAAGTLGY 624          
The following BLAST results are available for this feature:
BLAST of CF510001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 451
Match NameE-valueIdentityDescription
RLK5_ARATH1.748e-2342.75Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
ERL2_ARATH2.284e-2341.67LRR receptor-like serine/threonine-protein kinase ... [more]
Y5374_ARATH2.982e-2343.33Probable LRR receptor-like serine/threonine-protei... [more]
PSYR1_ARATH2.982e-2344.14Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
CRK40_ARATH3.895e-2346.90Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
Y5189_ARATH5.087e-2342.07Probable LRR receptor-like protein kinase At1g5189... [more]
RLK7_ARATH5.087e-2345.58Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
MEE39_ARATH6.644e-2344.59Probable LRR receptor-like serine/threonine-protei... [more]
Y5614_ARATH8.677e-2341.67Probable LRR receptor-like serine/threonine-protei... [more]
ACCR4_ARATH8.677e-2342.55Serine/threonine-protein kinase-like protein CCR4 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-516 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-83_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510001 ID=CF510001; Name=CF510001; organism=Citrus sinensis; type=EST; length=426bp
TTGCAGTCAAGCGCCTATATGACAACAACTACAGAAGGGTTGAACAATTT
ATGAATGAAGTTGAAATCCTCACACGTTTGCGCCACAAAAATCTTGTCTC
CCTTTTTGGCTGCACCTCTCGTTACAGTCAGGGTCTCCTACTTGTGTATG
AATTTGTTGCCAATGGCACTGTTGCGGATCAACTCCATGGTGATCGAGCT
AAGCATGGTTTGCTGACATGGCCTATCCGTATGAACATTGCCATAGAAAC
TGCCAGTGCATTGGCATATCTTCATGCTTCTGATATCATTCATCGTGATG
TGAAGACTAACAACATTCTCCTTGACAGCAATTTTTGTGTCAAAGTTGCA
GATTTTGGGCTTTCGCGATTGTTCCCTTTAGATGTTACTCACGTCTCAAC
TGCACCACAAGGAACTCCAGGCTATG
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