CF510001

Overview
NameCF510001
Unique NameCF510001
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length426
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 4.307e-22
Identity = 58/144 (40.28%), Postives = 84/144 (58.33%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASD---IIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVK L   + +   QF+ E+  ++ + H+NLV L+GC     +  +LVYE++ NG++   L GD+  H  L W  R  I +  A  L YLH      I+HRDVK +NILLDS    +++DFGL++L+    TH+ST   GT GY
Sbjct:  720 AVKLLSVGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCFE-GEHRMLVYEYLPNGSLDQALFGDKTLH--LDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHISTRVAGTIGY 860          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.307e-22
Identity = 62/146 (42.47%), Postives = 88/146 (60.27%), Query Frame = 3
Query:    3 AVKRL-YDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAP-QGTPGY 425
            AVKRL + ++ R  +  M E++ + ++RH+NL+ L G   R   GL+L Y ++  G++ D LHG   K  +L W  R N+A+  A  LAYLH      I+HRD+K  NIL+DS+    + DFGL+RL  LD + VSTA   GT GY
Sbjct:  853 AVKRLVFASHIRANQSMMREIDTIGKVRHRNLIKLEGFWLRKDDGLML-YRYMPKGSLYDVLHGVSPKENVLDWSARYNVALGVAHGLAYLHYDCHPPIVHRDIKPENILMDSDLEPHIGDFGLARL--LDDSTVSTATVTGTTGY 995          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.307e-22
Identity = 59/145 (40.69%), Postives = 89/145 (61.38%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHG-LLTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVK++  N+ + V +F+ E+E L RLRHKNLV+L G   ++   LLL+Y+++ NG++   L+    + G +L+W  R  IA   AS L YLH      +IHRDVK +N+L+DS+   ++ DFGL+RL+       +T   GT GY
Sbjct:  390 AVKKITPNSMQGVREFVAEIESLGRLRHKNLVNLQGWC-KHRNDLLLIYDYIPNGSLDSLLYSKPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLIDSDMNPRLGDFGLARLYERGSQSCTTVVVGTIGY 533          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.625e-22
Identity = 59/145 (40.69%), Postives = 88/145 (60.69%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH---ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAP-QGTPGY 425
            A+K+L   + +   +FM E+E + +++H+NLV L G   +     LLVYEF+  G++ D LH  +     L W  R  IAI +A  LA+LH   +  IIHRD+K++N+LLD N   +V+DFG++RL     TH+S +   GTPGY
Sbjct:  909 AIKKLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGYC-KVGDERLLVYEFMKYGSLEDVLHDPKKAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGY 1052          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.346e-22
Identity = 67/145 (46.21%), Postives = 86/145 (59.31%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASD---IIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTH-VSTAPQGTPGY 425
            AVKRL   + +   +F NEV +LTRL+H+NLV L G  +   + +L VYEFV N ++ D    D  K  LLTW +R  I    A  L YLH      IIHRD+K +NILLD+    KVADFG++RLF +D T  V+    GT GY
Sbjct:  365 AVKRLTRGSGQGEIEFRNEVLLLTRLQHRNLVKLLGFCNEGDEEIL-VYEFVPNSSL-DHFIFDEEKRLLLTWDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILLDAYMNPKVADFGMARLFNMDQTRAVTRKVVGTFGY 507          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.346e-22
Identity = 66/145 (45.52%), Postives = 86/145 (59.31%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASD---IIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTA-PQGTPGY 425
            AVKRL   + +   +F NEV +LTRL+H+NLV L G  +  ++ +L VYE V N ++ D    D  K  LLTW +R  I    A  L YLH      IIHRD+K +NILLD+    KVADFG++RLF +D T   T+   GT GY
Sbjct:  366 AVKRLAGGSGQGELEFKNEVLLLTRLQHRNLVKLLGFCNEGNEEIL-VYEHVPNSSL-DHFIFDEDKRWLLTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGY 508          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.253e-21
Identity = 56/144 (38.89%), Postives = 82/144 (56.94%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLHASD---IIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAPQGTPGY 425
            AVK+L   + +   +F+NE+  ++ L+H NLV L G     +Q LLL YE++ N +++  L   + K   + WP R  I    A  LA+LH       +HRD+K  NILLD +   K++DFGL+RL   + TH+ST   GT GY
Sbjct:  707 AVKQLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQ-LLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISDFGLARLDEEEKTHISTKVAGTIGY 849          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.253e-21
Identity = 68/153 (44.44%), Postives = 89/153 (58.17%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-------LTWPIRMNIAIETASALAYLHASD---IIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVST-APQGTPGY 425
            AVKRL  N+ +  ++F NEV I+ +L+HKNLV L G C  R  Q  +LVYEFV N ++   L G++ KH L       L W  R NI       L YLH      IIHRD+K +NILLD++   K+ADFG++R F +D T  +T    GT GY
Sbjct:  347 AVKRLSSNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCLERDEQ--ILVYEFVPNKSLNYFLFGNKQKHLLDPTKKSQLDWKRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDNTRRVVGTFGY 497          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.253e-21
Identity = 60/146 (41.10%), Postives = 89/146 (60.96%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFGCTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGL-LTWPIRMNIAIETASALAYLHAS---DIIHRDVKTNNILLDSNFCVKVADFGLSRLFPLDVTHVSTAP-QGTPGY 425
            A+K+L     +   +FM E+E + +++H+NLV L G   +  +  LLVYE++  G++   LH    K G+ L W  R  IAI  A  LA+LH S    IIHRD+K++N+LLD +F  +V+DFG++RL     TH+S +   GTPGY
Sbjct:  884 AIKKLIQVTGQGDREFMAEMETIGKIKHRNLVPLLGYC-KIGEERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQDFVARVSDFGMARLVSALDTHLSVSTLAGTPGY 1028          
BLAST of CF510001 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.253e-21
Identity = 64/145 (44.14%), Postives = 86/145 (59.31%), Query Frame = 3
Query:    3 AVKRLYDNNYRRVEQFMNEVEILTRLRHKNLVSLFG-CTSRYSQGLLLVYEFVANGTVADQLHGDRAKHGLLTWPIRMNIAIETASALAYLH--ASDIIHRDVKTNNILLDSNFCVKVADFGLSRLFPL-DVTHVSTAPQGTPGY 425
            AVK+L    Y+  ++++ EV  L +L H NLV L G C     +  LLVYEF+  G++ + L    A+   LTW IRM +AI  A  L +LH   S +I+RD K  NILLD+ F  K++DFGL++  P  D THVST   GT GY
Sbjct:  119 AVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVE--GENRLLVYEFMPKGSLENHLFRRGAQP--LTWAIRMKVAIGAAKGLTFLHDAKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGY 259          
The following BLAST results are available for this feature:
BLAST of CF510001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 451
Match NameE-valueIdentityDescription
Y1561_ARATH4.307e-2240.28Probable LRR receptor-like serine/threonine-protei... [more]
PEPR1_ARATH4.307e-2242.47Leucine-rich repeat receptor-like protein kinase P... [more]
LRKA3_ARATH4.307e-2240.69Lectin-domain containing receptor kinase A4.3 OS=A... [more]
BRI1_ARATH5.625e-2240.69Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
CRK38_ARATH7.346e-2246.21Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
CRK36_ARATH7.346e-2245.52Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
RKF1_ARATH1.253e-2138.89Probable LRR receptor-like serine/threonine-protei... [more]
CRK32_ARATH1.253e-2144.44Putative cysteine-rich receptor-like protein kinas... [more]
BRL3_ARATH1.253e-2141.10Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
APK2B_ARATH1.253e-2144.14Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-516 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-83_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510001 ID=CF510001; Name=CF510001; organism=Citrus sinensis; type=EST; length=426bp
TTGCAGTCAAGCGCCTATATGACAACAACTACAGAAGGGTTGAACAATTT
ATGAATGAAGTTGAAATCCTCACACGTTTGCGCCACAAAAATCTTGTCTC
CCTTTTTGGCTGCACCTCTCGTTACAGTCAGGGTCTCCTACTTGTGTATG
AATTTGTTGCCAATGGCACTGTTGCGGATCAACTCCATGGTGATCGAGCT
AAGCATGGTTTGCTGACATGGCCTATCCGTATGAACATTGCCATAGAAAC
TGCCAGTGCATTGGCATATCTTCATGCTTCTGATATCATTCATCGTGATG
TGAAGACTAACAACATTCTCCTTGACAGCAATTTTTGTGTCAAAGTTGCA
GATTTTGGGCTTTCGCGATTGTTCCCTTTAGATGTTACTCACGTCTCAAC
TGCACCACAAGGAACTCCAGGCTATG
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