CF510006

Overview
NameCF510006
Unique NameCF510006
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length507
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510006 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 2.277e-12
Identity = 43/110 (39.09%), Postives = 56/110 (50.91%), Query Frame = 1
Query:    1 KELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNL-----------------------TGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELP 261
            K L L  N+L G +PS +  CS+L  LIL +NNL                       TGP+P ++ NL N+  + LS N LSG +P EL +L  L   N+SHN L G LP
Sbjct:  455 KRLLLGYNYLEGSVPSDLGGCSTLERLILEENNLRGGLPDFVEKQNLLFFDLSGNNFTGPIPPSLGNLKNVTAIYLSSNQLSGSIPPELGSLVKLEHLNLSHNILKGILP 564          

HSP 2 Score: 69.3218 bits (168), Expect = 1.130e-11
Identity = 36/86 (41.86%), Postives = 49/86 (56.98%), Query Frame = 1
Query:    7 LKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPV 264
            L L  N  SGRIP ++  C S+  L L QN L G +P  +  LS L+Y+ L  N+LSG +P  +  +  L S  +  N+L GELPV
Sbjct:  313 LYLAGNHFSGRIPPELGKCKSMIDLQLQQNQLEGEIPGELGMLSQLQYLHLYTNNLSGEVPLSIWKIQSLQSLQLYQNNLSGELPV 398          

HSP 3 Score: 67.3958 bits (163), Expect = 4.294e-11
Identity = 34/87 (39.08%), Postives = 51/87 (58.62%), Query Frame = 1
Query:    1 KELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELP 261
            K++ L  N   G IPSQ+ NCS L  + LS N+ TG +P  +  L NL+ + L FN L G  P+ L+++ HL +   + N L+G +P
Sbjct:   95 KKVVLSGNGFFGSIPSQLGNCSLLEHIDLSSNSFTGNIPDTLGALQNLRNLSLFFNSLIGPFPESLLSIPHLETVYFTGNGLNGSIP 181          

HSP 4 Score: 67.3958 bits (163), Expect = 4.294e-11
Identity = 34/81 (41.98%), Postives = 53/81 (65.43%), Query Frame = 1
Query:   22 NFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPV 264
            N L+G IPS I N S LT+L L  N  +GPVP+++ N++ L+ + L+ N+L G LP  L NL +L+  ++ +N L G +P+
Sbjct:  174 NGLNGSIPSNIGNMSELTTLWLDDNQFSGPVPSSLGNITTLQELYLNDNNLVGTLPVTLNNLENLVYLDVRNNSLVGAIPL 254          

HSP 5 Score: 67.0106 bits (162), Expect = 5.608e-11
Identity = 32/87 (36.78%), Postives = 51/87 (58.62%), Query Frame = 1
Query:    7 LKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPVG 267
            L L+ N  SG +PS + N ++L  L L+ NNL G +P  + NL NL Y+D+  N L G +P + ++   + + ++S+N   G LP G
Sbjct:  193 LWLDDNQFSGPVPSSLGNITTLQELYLNDNNLVGTLPVTLNNLENLVYLDVRNNSLVGAIPLDFVSCKQIDTISLSNNQFTGGLPPG 279          

HSP 6 Score: 67.0106 bits (162), Expect = 5.608e-11
Identity = 33/83 (39.76%), Postives = 50/83 (60.24%), Query Frame = 1
Query:   13 LEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELP 261
            L  N  +G IP  + N  ++T++ LS N L+G +P  + +L  L++++LS N L GILP EL N   L   + SHN L+G +P
Sbjct:  506 LSGNNFTGPIPPSLGNLKNVTAIYLSSNQLSGSIPPELGSLVKLEHLNLSHNILKGILPSELSNCHKLSELDASHNLLNGSIP 588          
BLAST of CF510006 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 71.633 bits (174), Expect = 2.277e-12
Identity = 41/106 (38.68%), Postives = 62/106 (58.49%), Query Frame = 1
Query:    7 LKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPVGGFFNTISPSSVSGNPSLCG 324
            ++L  N LSG I  +  N   L    L  N L+G +P++++ +++L+ +DLS N LSG +P  L  LS L  F++++N+L G +P GG F T   SS   N  LCG
Sbjct:  528 IELGHNNLSGPIWEEFGNLKKLHVFDLKWNALSGSIPSSLSGMTSLEALDLSNNRLSGSIPVSLQQLSFLSKFSVAYNNLSGVIPSGGQFQTFPNSSFESN-HLCG 632          
BLAST of CF510006 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.625e-12
Identity = 52/154 (33.77%), Postives = 72/154 (46.75%), Query Frame = 1
Query:    7 LKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLS----------------------FNISHNHLHGELP--VGGFFNTISPSSVSGNPSLCGSVVNRSCPAVQNKPIVLNPNSSNP 396
            L L  N LSG +P  I +  SL  + L  NN +G VP+ ++   N+  +DLSFN  +G +P    NL  L                         N+S+NHL+G +P  +GGF      SS SGN  LCG  + + C A  + P  L P+ S P
Sbjct:  117 LSLRSNLLSGNLPPDIHSLPSLDYIYLQHNNFSGEVPSFVSRQLNI--LDLSFNSFTGKIPATFQNLKQLTGLSLQNNKLSGPVPNLDTVSLRRLNLSNNHLNGSIPSALGGF----PSSSFSGNTLLCGLPL-QPC-ATSSPPPSLTPHISTP 262          
BLAST of CF510006 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.625e-12
Identity = 33/85 (38.82%), Postives = 51/85 (60.00%), Query Frame = 1
Query:    7 LKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELP 261
            L+++ N ++G IPS + N  SLT     QN LTG +P +++    L+ +DLS+N LSG +PKE+  L +L    +  N L G +P
Sbjct:  363 LEIDNNLITGEIPSLMSNLRSLTMFFAWQNKLTGNIPQSLSQCRELQAIDLSYNSLSGSIPKEIFGLRNLTKLLLLSNDLSGFIP 447          

HSP 2 Score: 69.707 bits (169), Expect = 8.652e-12
Identity = 34/87 (39.08%), Postives = 53/87 (60.92%), Query Frame = 1
Query:    1 KELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELP 261
            + L L +N L G+IP+++ NC  L  +  S+N LTG +P +   L NL+ + LS N +SG +P+EL N + L    I +N + GE+P
Sbjct:  289 QSLLLWQNNLVGKIPTELGNCPELWLIDFSENLLTGTIPRSFGKLENLQELQLSVNQISGTIPEELTNCTKLTHLEIDNNLITGEIP 375          

HSP 3 Score: 68.5514 bits (166), Expect = 1.927e-11
Identity = 49/150 (32.67%), Postives = 70/150 (46.67%), Query Frame = 1
Query:    4 ELKLEKNFLSGRIPSQIKNCSSL-------------------------TSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPVGGFFNTISPSSVSGNPSL--CGSVVNRSCPAVQNKPIV 372
            +L L KN LSG IP +I  C SL                          SL LS N   G +P+  ++L NL  +D+S N L+G L   L +L +L+S NIS+N   G+LP   FF  +  S ++ N  L    ++  R  P  +N  +V
Sbjct:  553 KLNLAKNRLSGEIPREISTCRSLQLLNLGENDFSGEIPDELGQIPSLAISLNLSCNRFVGEIPSRFSDLKNLGVLDVSHNQLTGNL-NVLTDLQNLVSLNISYNDFSGDLPNTPFFRRLPLSDLASNRGLYISNAISTRPDPTTRNSSVV 701          
BLAST of CF510006 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 6.625e-12
Identity = 37/101 (36.63%), Postives = 61/101 (60.40%), Query Frame = 1
Query:    7 LKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPVGGFFNTISPSSVSGN 309
            L+L  N ++G IP ++ +   L SL L  NN++GP+P+++  L  L+++ L  N LSG +P+ L  L  L   +IS+N L G++PV G F+  +  S + N
Sbjct:   99 LELFNNNITGEIPEELGDLMELVSLDLFANNISGPIPSSLGKLGKLRFLRLYNNSLSGEIPRSLTALP-LDVLDISNNRLSGDIPVNGSFSQFTSMSFANN 198          
BLAST of CF510006 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.625e-12
Identity = 41/106 (38.68%), Postives = 53/106 (50.00%), Query Frame = 1
Query:    7 LKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPVGGFFNTISPSSVSGNPSLCG 324
            L L  N +SG IP        L  L L  N LTG +P +   L  +  +DLS NDL G LP  L  LS L   ++S+N+L G +P GG   T   +  + N  LCG
Sbjct:  644 LDLSYNAVSGSIPLGYGAMGYLQVLNLGHNLLTGTIPDSFGGLKAIGVLDLSHNDLQGFLPGSLGGLSFLSDLDVSNNNLTGPIPFGGQLTTFPLTRYANNSGLCG 749          

HSP 2 Score: 68.1662 bits (165), Expect = 2.517e-11
Identity = 37/102 (36.27%), Postives = 55/102 (53.92%), Query Frame = 1
Query:    7 LKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELP--VGGFFNTISPSSVSG 306
            L L  N L+G +P  I  C+++  + LS N LTG +P  I  L  L  + L  N L+G +P EL N  +L+  +++ N+L G LP  +      + P SVSG
Sbjct:  480 LILNNNLLTGSLPESISKCTNMLWISLSSNLLTGEIPVGIGKLEKLAILQLGNNSLTGNIPSELGNCKNLIWLDLNSNNLTGNLPGELASQAGLVMPGSVSG 581          
BLAST of CF510006 vs. ExPASy Swiss-Prot
Match: PGIP_VITVI (Polygalacturonase inhibitor OS=Vitis vinifera GN=pgip PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 8.652e-12
Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = 1
Query:   28 LSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELP 261
            L+G+IP  I     L  + LS  NL+GPVPA  + L NL Y+DLSFN+LSG +P  L  L +L + ++  NHL G +P
Sbjct:  110 LTGQIPPAIAKLKHLKMVRLSWTNLSGPVPAFFSELKNLTYLDLSFNNLSGPIPGSLSLLPNLGALHLDRNHLTGPIP 187          
BLAST of CF510006 vs. ExPASy Swiss-Prot
Match: Y5815_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g58150 OS=Arabidopsis thaliana GN=At5g58150 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.130e-11
Identity = 39/89 (43.82%), Postives = 55/89 (61.80%), Query Frame = 1
Query:    1 KELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPVG 267
            + L L  N +S  +PS I N  SL +L LS N+++G +PAAI+NL NL  + L  ND    +P EL++   LLS ++S N L+  LPVG
Sbjct:  116 ESLNLSSNRISEPLPSNIGNFMSLHTLDLSFNSISGKIPAAISNLVNLTTLKLHNNDFQFGVPPELVHCRSLLSIDLSSNRLNESLPVG 204          
BLAST of CF510006 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.476e-11
Identity = 32/80 (40.00%), Postives = 53/80 (66.25%), Query Frame = 1
Query:   22 NFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELP 261
            N L+G+IP ++ N + L  L+LS N LTG +P  + +LSNL  + + +N++SG LP  L NL  L  F++++N + G++P
Sbjct:  111 NDLTGQIPPELGNLTHLIFLLLSGNQLTGSLPQELGSLSNLLILQIDYNEISGKLPTSLANLKKLKHFHMNNNSITGQIP 190          

HSP 2 Score: 66.2402 bits (160), Expect = 9.566e-11
Identity = 36/87 (41.38%), Postives = 57/87 (65.52%), Query Frame = 1
Query:    1 KELKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELP 261
            KEL+L    L+G++  ++   S+LT L    N+LTG +P  + NL++L ++ LS N L+G LP+EL +LS+LL   I +N + G+LP
Sbjct:   80 KELRLLNMNLTGQLAPELGLLSNLTILNFMWNDLTGQIPPELGNLTHLIFLLLSGNQLTGSLPQELGSLSNLLILQIDYNEISGKLP 166          
BLAST of CF510006 vs. ExPASy Swiss-Prot
Match: Y4294_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20940 OS=Arabidopsis thaliana GN=At4g20940 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.927e-11
Identity = 40/98 (40.82%), Postives = 55/98 (56.12%), Query Frame = 1
Query:    7 LKLEKNFLSGRIPSQIKNCSSLTSLILSQNNLTGPVPAAIANLSNLKYVDLSFNDLSGILPKELINLSHLLSFNISHNHLHGELPVGGFFNTISPSSV 300
            L L  N  S  +P +I    SL +L LS NN +G +P ++  L +L+ +D+S N LSG LPK L  L+ LL  N+S N   G++P G  F  IS   V
Sbjct:  107 LDLSDNLFSSSLPKEIGRSVSLRNLSLSGNNFSGEIPESMGGLISLQSLDMSSNSLSGPLPKSLTRLNDLLYLNLSSNGFTGKMPRG--FELISSLEV 202          
The following BLAST results are available for this feature:
BLAST of CF510006 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
RPK1_IPONI2.277e-1239.09Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
PSKR1_ARATH2.277e-1238.68Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
Y5830_ARATH6.625e-1233.77Probable inactive receptor kinase At5g58300 OS=Ara... [more]
Y4265_ARATH6.625e-1238.82Probable LRR receptor-like serine/threonine-protei... [more]
SERK5_ARATH6.625e-1236.63Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
BRL3_ARATH6.625e-1238.68Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
PGIP_VITVI8.652e-1246.15Polygalacturonase inhibitor OS=Vitis vinifera GN=p... [more]
Y5815_ARATH1.130e-1143.82Probably inactive leucine-rich repeat receptor-lik... [more]
Y5374_ARATH1.476e-1140.00Probable LRR receptor-like serine/threonine-protei... [more]
Y4294_ARATH1.927e-1140.82Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-521 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510006 ID=CF510006; Name=CF510006; organism=Citrus sinensis; type=EST; length=507bp
AAGGAACTGAAGCTGGAGAAGAATTTCCTGTCTGGTAGAATTCCTTCTCA
AATCAAGAACTGCTCATCTCTGACATCTTTGATCCTGTCTCAGAACAACC
TCACTGGTCCAGTCCCTGCTGCCATTGCAAACCTTAGCAATCTTAAGTAT
GTAGACTTGTCTTTTAATGACCTCTCTGGAATATTACCCAAAGAACTTAT
AAATCTTTCCCACCTCCTGTCCTTTAATATCTCCCACAATCACCTACATG
GTGAACTACCAGTTGGGGGCTTCTTTAACACCATTTCCCCCTCATCTGTC
TCCGGGAATCCATCCCTGTGCGGATCTGTTGTTAACCGCTCATGTCCTGC
TGTTCAGAACAAGCCCATTGTCCTCAACCCCAACTCTTCCAACCCCTACA
CTGGCAACTCCTCCCCTAATCACCGTCGCAAGATTGGACTCAGCATCTCT
GCCCTCATTGCCATTGGGGCAGCTGCTTTTATTGCCATTGGTGTAATAGC
TGTTACT
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