CF510008

Overview
NameCF510008
Unique NameCF510008
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length556
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_METCA (Chaperone protein dnaJ OS=Methylococcus capsulatus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.808e-19
Identity = 42/82 (51.22%), Postives = 57/82 (69.51%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 548
            +A + YYE L VPR ASD  IK+A+R+LA+KYHPD+N+ N EA +RF  +  AY+VLSD + R+ YD +G  G+     GGG
Sbjct:    1 MAKEDYYETLGVPRNASDSDIKKAFRRLAMKYHPDRNKDNPEAEERFKSVKEAYDVLSDPKKRSAYDQFGHAGIDPSMGGGG 82          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_KLEP7 (Chaperone protein dnaJ OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.808e-19
Identity = 41/84 (48.81%), Postives = 60/84 (71.43%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYE+L+D++ R  YD YG    +Q   GGG G
Sbjct:    1 MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEILTDAQKRAAYDQYGHAAFEQGGMGGGGG 84          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_KLEP3 (Chaperone protein dnaJ OS=Klebsiella pneumoniae (strain 342) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.808e-19
Identity = 41/84 (48.81%), Postives = 60/84 (71.43%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYE+L+D++ R  YD YG    +Q   GGG G
Sbjct:    1 MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEILTDAQKRAAYDQYGHAAFEQGGMGGGGG 84          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_ESCF3 (Chaperone protein dnaJ OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.808e-19
Identity = 42/82 (51.22%), Postives = 59/82 (71.95%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 548
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+DS+ R  YD YG    +Q   GGG
Sbjct:    1 MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGG 82          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOUT (Chaperone protein dnaJ OS=Escherichia coli (strain UTI89 / UPEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.808e-19
Identity = 42/82 (51.22%), Postives = 59/82 (71.95%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 548
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+DS+ R  YD YG    +Q   GGG
Sbjct:    1 MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGG 82          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOSM (Chaperone protein dnaJ OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.808e-19
Identity = 42/82 (51.22%), Postives = 59/82 (71.95%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 548
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+DS+ R  YD YG    +Q   GGG
Sbjct:    1 MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGG 82          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOSE (Chaperone protein dnaJ OS=Escherichia coli (strain SE11) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.808e-19
Identity = 42/82 (51.22%), Postives = 59/82 (71.95%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 548
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+DS+ R  YD YG    +Q   GGG
Sbjct:    1 MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGG 82          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOLU (Chaperone protein dnaJ OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.808e-19
Identity = 42/82 (51.22%), Postives = 59/82 (71.95%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 548
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+DS+ R  YD YG    +Q   GGG
Sbjct:    1 MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGG 82          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOLC (Chaperone protein dnaJ OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.808e-19
Identity = 42/82 (51.22%), Postives = 59/82 (71.95%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 548
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+DS+ R  YD YG    +Q   GGG
Sbjct:    1 MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGG 82          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_ECOL6 (Chaperone protein dnaJ OS=Escherichia coli O6 GN=dnaJ PE=2 SV=3)

HSP 1 Score: 95.5153 bits (236), Expect = 1.808e-19
Identity = 42/82 (51.22%), Postives = 59/82 (71.95%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 548
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+DS+ R  YD YG    +Q   GGG
Sbjct:    1 MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGG 82          
The following BLAST results are available for this feature:
BLAST of CF510008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_METCA1.808e-1951.22Chaperone protein dnaJ OS=Methylococcus capsulatus... [more]
DNAJ_KLEP71.808e-1948.81Chaperone protein dnaJ OS=Klebsiella pneumoniae su... [more]
DNAJ_KLEP31.808e-1948.81Chaperone protein dnaJ OS=Klebsiella pneumoniae (s... [more]
DNAJ_ESCF31.808e-1951.22Chaperone protein dnaJ OS=Escherichia fergusonii (... [more]
DNAJ_ECOUT1.808e-1951.22Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_ECOSM1.808e-1951.22Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_ECOSE1.808e-1951.22Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_ECOLU1.808e-1951.22Chaperone protein dnaJ OS=Escherichia coli O17:K52... [more]
DNAJ_ECOLC1.808e-1951.22Chaperone protein dnaJ OS=Escherichia coli (strain... [more]
DNAJ_ECOL61.808e-1951.22Chaperone protein dnaJ OS=Escherichia coli O6 GN=d... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-523 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510008 ID=CF510008; Name=CF510008; organism=Citrus sinensis; type=EST; length=556bp
CCTCGCCCAGTTCCTGGGACTTTTAACCGGCAACACCATCACCTGACCTC
ACTGATAATTTCCAAAGGAGAGAGAGAGAGAGAGAGAGACGACTTGCAGC
AACGACTTCTGAATTGACAGATAAAAATTAAAAAGAAAAAAATTATTGTA
ATCTCAGAATTTTGCTAAGATCTGAAAATTAAACCCTAGATTCTAAGTTT
CGGAGAGGCATTAAACTCTCTCCTCTTGTTGATCTATTAATGGCGCATCG
GCGAGCAAGGCTGTTGTTCCTATTGTGCGCACTTTGTTACGCCCTCAACG
TCATTGCGGGGAAGAGCTACTATGAAGTATTGCAAGTGCCGAGGGGAGCA
TCGGACGAGCAGATCAAAAGAGCGTATAGAAAGCTGGCATTGAAGTATCA
TCCTGATAAAAACCAGGGGAATGAAGAAGCTAATAAGCGATTTGCTGAGA
TTAACAATGCGTATGAGGTGTTATCGGATAGCGAAACGAGGAATATATAT
GATACATATGGAGAAGAGGGACTGAAACAGCATGCTGCTGGTGGAGGCAA
AGGTGG
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