CF510008

Overview
NameCF510008
Unique NameCF510008
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length556
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_EDWI9 (Chaperone protein dnaJ OS=Edwardsiella ictaluri (strain 93-146) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.790e-20
Identity = 43/84 (51.19%), Postives = 60/84 (71.43%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            +A K YYE+L V R A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYE+L+D++ R  YD YG    +Q   GGG G
Sbjct:    1 MAKKDYYEILGVSREADEREIKKAYKRLAMKYHPDRNQGDKEAEDKFKEIKEAYEILTDAQKRAAYDQYGHAAFEQGGMGGGGG 84          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_BORA1 (Chaperone protein dnaJ OS=Bordetella avium (strain 197N) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.790e-20
Identity = 43/81 (53.09%), Postives = 60/81 (74.07%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGG 545
            +A + YYEVL V + A+D+++K+AYRKLA+KYHPD+N GN+EA ++F E   AYEVL D + R  YD YG  G+  ++AGG
Sbjct:    1 MAKRDYYEVLGVAKDAADDELKKAYRKLAMKYHPDRNPGNKEAEEKFKEAKEAYEVLGDEQKRAAYDRYGHAGVDPNSAGG 81          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DJB11_BOVIN (DnaJ homolog subfamily B member 11 OS=Bos taurus GN=DNAJB11 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.790e-20
Identity = 46/76 (60.53%), Postives = 59/76 (77.63%), Query Frame = 3
Query:  300 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK 527
            VIAG+ +Y++L VPR AS + IK+AYRKLAL+ HPD+N  +  A ++F ++  AYEVLSDSE R  YDTYGEEGLK
Sbjct:   20 VIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPRAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLK 95          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNJB6_XENTR (DnaJ homolog subfamily B member 6 OS=Xenopus tropicalis GN=dnajb6 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.644e-20
Identity = 51/80 (63.75%), Postives = 60/80 (75.00%), Query Frame = 3
Query:  318 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            YY+VL V R AS E IK+AYRKLALK+HPDKN  N +EA +RF E+  AYEVLSDS+ R+IYD YG+EGL     GGG G
Sbjct:    4 YYDVLGVQRNASPEDIKKAYRKLALKWHPDKNPDNKDEAERRFKEVAEAYEVLSDSKKRDIYDKYGKEGL----TGGGGG 79          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNJB5_BOVIN (DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.644e-20
Identity = 46/82 (56.10%), Postives = 61/82 (74.39%), Query Frame = 3
Query:  309 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            GK YY++L +P GA++++IK+AYRK+ALKYHPDKN+    A ++F EI  AY+VLSD + R +YD YGEEGLK    GG  G
Sbjct:    2 GKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNK-EPNAEEKFKEIAEAYDVLSDPKKRGLYDQYGEEGLK--TGGGSSG 80          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNJ6B_XENLA (DnaJ homolog subfamily B member 6-B OS=Xenopus laevis GN=dnajb6-B PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.644e-20
Identity = 48/78 (61.54%), Postives = 59/78 (75.64%), Query Frame = 3
Query:  318 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 548
            YY+VL V R +S + IK+AYR+LALK+HPDKN  N EEA +RF E+  AYEVLSDS+ R+IYD YG+EGL     GGG
Sbjct:    4 YYDVLGVQRNSSPDDIKKAYRRLALKWHPDKNPDNKEEAERRFKEVAEAYEVLSDSKKRDIYDKYGKEGLAGGGGGGG 81          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_WOLPM (Chaperone protein dnaJ OS=Wolbachia pipientis wMel GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.644e-20
Identity = 47/81 (58.02%), Postives = 62/81 (76.54%), Query Frame = 3
Query:  312 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            K YY++L+V R AS ++IK+AY+KLAL+YHPD+N GN+EA ++F E+  AYEVLSDSE R  YD YG EG    A+GG +G
Sbjct:    4 KDYYDLLEVGRNASIDEIKKAYKKLALRYHPDRNPGNQEAEEKFKEVTAAYEVLSDSEKRAGYDRYGHEG----ASGGFQG 80          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOAB (Chaperone protein dnaJ OS=Clostridium acetobutylicum GN=dnaJ PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 3.644e-20
Identity = 46/84 (54.76%), Postives = 62/84 (73.81%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            +A K YYEVL + +GASD++IK+A+RKLA+KYHPDKN+GN+EA ++F EIN AY+VLSD + +  YD +G         GGG G
Sbjct:    1 MANKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNRGNKEAEEKFKEINEAYQVLSDPDKKANYDRFGTADFN---GGGGFG 81          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_CAMJR (Chaperone protein dnaJ OS=Campylobacter jejuni (strain RM1221) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.644e-20
Identity = 46/80 (57.50%), Postives = 60/80 (75.00%), Query Frame = 3
Query:  315 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            SYYE+L++ + A  E IK+AYRK+ALKYHPD+NQG++EA  +F  +N AYEVLS+ E R IYD YG++ LK    GGG G
Sbjct:    4 SYYEILEITQNADKETIKKAYRKMALKYHPDRNQGDKEAEDKFKLVNEAYEVLSNDEKRAIYDRYGKDALK----GGGFG 79          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_CAMJE (Chaperone protein dnaJ OS=Campylobacter jejuni GN=dnaJ PE=3 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 3.644e-20
Identity = 46/80 (57.50%), Postives = 60/80 (75.00%), Query Frame = 3
Query:  315 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            SYYE+L++ + A  E IK+AYRK+ALKYHPD+NQG++EA  +F  +N AYEVLS+ E R IYD YG++ LK    GGG G
Sbjct:    4 SYYEILEITQNADKETIKKAYRKMALKYHPDRNQGDKEAEDKFKLVNEAYEVLSNDEKRAIYDRYGKDALK----GGGFG 79          
The following BLAST results are available for this feature:
BLAST of CF510008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_EDWI92.790e-2051.19Chaperone protein dnaJ OS=Edwardsiella ictaluri (s... [more]
DNAJ_BORA12.790e-2053.09Chaperone protein dnaJ OS=Bordetella avium (strain... [more]
DJB11_BOVIN2.790e-2060.53DnaJ homolog subfamily B member 11 OS=Bos taurus G... [more]
DNJB6_XENTR3.644e-2063.75DnaJ homolog subfamily B member 6 OS=Xenopus tropi... [more]
DNJB5_BOVIN3.644e-2056.10DnaJ homolog subfamily B member 5 OS=Bos taurus GN... [more]
DNJ6B_XENLA3.644e-2061.54DnaJ homolog subfamily B member 6-B OS=Xenopus lae... [more]
DNAJ_WOLPM3.644e-2058.02Chaperone protein dnaJ OS=Wolbachia pipientis wMel... [more]
DNAJ_CLOAB3.644e-2054.76Chaperone protein dnaJ OS=Clostridium acetobutylic... [more]
DNAJ_CAMJR3.644e-2057.50Chaperone protein dnaJ OS=Campylobacter jejuni (st... [more]
DNAJ_CAMJE3.644e-2057.50Chaperone protein dnaJ OS=Campylobacter jejuni GN=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-523 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510008 ID=CF510008; Name=CF510008; organism=Citrus sinensis; type=EST; length=556bp
CCTCGCCCAGTTCCTGGGACTTTTAACCGGCAACACCATCACCTGACCTC
ACTGATAATTTCCAAAGGAGAGAGAGAGAGAGAGAGAGACGACTTGCAGC
AACGACTTCTGAATTGACAGATAAAAATTAAAAAGAAAAAAATTATTGTA
ATCTCAGAATTTTGCTAAGATCTGAAAATTAAACCCTAGATTCTAAGTTT
CGGAGAGGCATTAAACTCTCTCCTCTTGTTGATCTATTAATGGCGCATCG
GCGAGCAAGGCTGTTGTTCCTATTGTGCGCACTTTGTTACGCCCTCAACG
TCATTGCGGGGAAGAGCTACTATGAAGTATTGCAAGTGCCGAGGGGAGCA
TCGGACGAGCAGATCAAAAGAGCGTATAGAAAGCTGGCATTGAAGTATCA
TCCTGATAAAAACCAGGGGAATGAAGAAGCTAATAAGCGATTTGCTGAGA
TTAACAATGCGTATGAGGTGTTATCGGATAGCGAAACGAGGAATATATAT
GATACATATGGAGAAGAGGGACTGAAACAGCATGCTGCTGGTGGAGGCAA
AGGTGG
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