CF510008

Overview
NameCF510008
Unique NameCF510008
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length556
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_CAMJD (Chaperone protein dnaJ OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.644e-20
Identity = 46/80 (57.50%), Postives = 60/80 (75.00%), Query Frame = 3
Query:  315 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            SYYE+L++ + A  E IK+AYRK+ALKYHPD+NQG++EA  +F  +N AYEVLS+ E R IYD YG++ LK    GGG G
Sbjct:    4 SYYEILEITQNADKETIKKAYRKMALKYHPDRNQGDKEAEDKFKLVNEAYEVLSNDEKRAIYDRYGKDALK----GGGFG 79          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_CAMJ8 (Chaperone protein dnaJ OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.644e-20
Identity = 46/80 (57.50%), Postives = 60/80 (75.00%), Query Frame = 3
Query:  315 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            SYYE+L++ + A  E IK+AYRK+ALKYHPD+NQG++EA  +F  +N AYEVLS+ E R IYD YG++ LK    GGG G
Sbjct:    4 SYYEILEITQSADKETIKKAYRKMALKYHPDRNQGDKEAEDKFKLVNEAYEVLSNDEKRAIYDRYGKDALK----GGGFG 79          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNJB5_HUMAN (DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.759e-20
Identity = 46/80 (57.50%), Postives = 61/80 (76.25%), Query Frame = 3
Query:  309 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 548
            GK YY++L +P GA++++IK+AYRK+ALKYHPDKN+    A ++F EI  AY+VLSD + R +YD YGEEGLK    GGG
Sbjct:    2 GKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNK-EPNAEEKFKEIAEAYDVLSDPKKRGLYDQYGEEGLK---TGGG 77          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEE4 (Chaperone protein dnaJ OS=Pseudomonas entomophila (strain L48) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.759e-20
Identity = 44/84 (52.38%), Postives = 59/84 (70.24%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            +A + +YEVL V RGAS+  +K+AYR+LA+KYHPD+N G++E+  +F E N AYEVLSD+  R  YD YG  G+     GGG G
Sbjct:    1 MAKRDFYEVLGVERGASEGDLKKAYRRLAMKYHPDRNPGDKESEDKFKEANEAYEVLSDTSKRAAYDQYGHAGVDPSMGGGGAG 84          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_PELCD (Chaperone protein dnaJ OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.759e-20
Identity = 45/79 (56.96%), Postives = 57/79 (72.15%), Query Frame = 3
Query:  312 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 548
            + YYEVL V R AS+ +IK+AYRKLA+KYHPDKN G++ A  +F EI+ AY +LSD++ R IYD YG  GL     GGG
Sbjct:    4 RDYYEVLGVHRNASETEIKKAYRKLAIKYHPDKNAGDKAAEDKFKEISEAYSILSDTQQRVIYDQYGHAGLNGGGGGGG 82          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLFF (Chaperone protein dnaJ OS=Chlamydophila felis (strain Fe/C-56) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.759e-20
Identity = 48/80 (60.00%), Postives = 60/80 (75.00%), Query Frame = 3
Query:  318 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAG-GGKG 554
            YY+VL V + AS E+IK+AYRKLA+KYHPDKN G+ EA KRF E++ AYEVLSD++ R  YD YG++G    A G GG G
Sbjct:    3 YYDVLGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGGAG 82          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_WOLPP (Chaperone protein dnaJ OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 46/78 (58.97%), Postives = 60/78 (76.92%), Query Frame = 3
Query:  312 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGG 545
            K YY++L+V R AS ++IK+AY+KLALKYHPD+N GN+EA ++F E+  AYEVLSDSE R  YD YG +G    A+GG
Sbjct:    4 KDYYDLLEVSRNASTDEIKKAYKKLALKYHPDRNPGNKEAEEKFKEVTAAYEVLSDSEKRAGYDRYGHDG----ASGG 77          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNFM (Chaperone protein dnaJ OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 44/81 (54.32%), Postives = 60/81 (74.07%), Query Frame = 3
Query:  312 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            + YYE+L V R AS+E+IK+AYRKLALKYHPD+N G++++ + F E   AYEVL D++ + IYDTYG EGL+     G +G
Sbjct:    4 RDYYEILGVTRQASEEEIKKAYRKLALKYHPDRNPGDKDSEELFKEAAEAYEVLHDAQKKRIYDTYGHEGLRGTGFSGFRG 84          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPIN (Chaperone protein dnaJ OS=Leptospira interrogans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 42/81 (51.85%), Postives = 60/81 (74.07%), Query Frame = 3
Query:  312 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            +SYY++L V + A+DE+IK AYRKLA+KYHPDKN+GN+E+ ++F E   AYE+L D + R  YD +G+ G+   A G G+G
Sbjct:    4 RSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVSGGAGGFGQG 84          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPIC (Chaperone protein dnaJ OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 42/81 (51.85%), Postives = 60/81 (74.07%), Query Frame = 3
Query:  312 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            +SYY++L V + A+DE+IK AYRKLA+KYHPDKN+GN+E+ ++F E   AYE+L D + R  YD +G+ G+   A G G+G
Sbjct:    4 RSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVSGGAGGFGQG 84          
The following BLAST results are available for this feature:
BLAST of CF510008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_CAMJD3.644e-2057.50Chaperone protein dnaJ OS=Campylobacter jejuni sub... [more]
DNAJ_CAMJ83.644e-2057.50Chaperone protein dnaJ OS=Campylobacter jejuni sub... [more]
DNJB5_HUMAN4.759e-2057.50DnaJ homolog subfamily B member 5 OS=Homo sapiens ... [more]
DNAJ_PSEE44.759e-2052.38Chaperone protein dnaJ OS=Pseudomonas entomophila ... [more]
DNAJ_PELCD4.759e-2056.96Chaperone protein dnaJ OS=Pelobacter carbinolicus ... [more]
DNAJ_CHLFF4.759e-2060.00Chaperone protein dnaJ OS=Chlamydophila felis (str... [more]
DNAJ_WOLPP6.216e-2058.97Chaperone protein dnaJ OS=Wolbachia pipientis subs... [more]
DNAJ_SYNFM6.216e-2054.32Chaperone protein dnaJ OS=Syntrophobacter fumaroxi... [more]
DNAJ_LEPIN6.216e-2051.85Chaperone protein dnaJ OS=Leptospira interrogans G... [more]
DNAJ_LEPIC6.216e-2051.85Chaperone protein dnaJ OS=Leptospira interrogans s... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-523 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510008 ID=CF510008; Name=CF510008; organism=Citrus sinensis; type=EST; length=556bp
CCTCGCCCAGTTCCTGGGACTTTTAACCGGCAACACCATCACCTGACCTC
ACTGATAATTTCCAAAGGAGAGAGAGAGAGAGAGAGAGACGACTTGCAGC
AACGACTTCTGAATTGACAGATAAAAATTAAAAAGAAAAAAATTATTGTA
ATCTCAGAATTTTGCTAAGATCTGAAAATTAAACCCTAGATTCTAAGTTT
CGGAGAGGCATTAAACTCTCTCCTCTTGTTGATCTATTAATGGCGCATCG
GCGAGCAAGGCTGTTGTTCCTATTGTGCGCACTTTGTTACGCCCTCAACG
TCATTGCGGGGAAGAGCTACTATGAAGTATTGCAAGTGCCGAGGGGAGCA
TCGGACGAGCAGATCAAAAGAGCGTATAGAAAGCTGGCATTGAAGTATCA
TCCTGATAAAAACCAGGGGAATGAAGAAGCTAATAAGCGATTTGCTGAGA
TTAACAATGCGTATGAGGTGTTATCGGATAGCGAAACGAGGAATATATAT
GATACATATGGAGAAGAGGGACTGAAACAGCATGCTGCTGGTGGAGGCAA
AGGTGG
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