CF510008

Overview
NameCF510008
Unique NameCF510008
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length556
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_ENTS8 (Chaperone protein dnaJ OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 41/82 (50.00%), Postives = 60/82 (73.17%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 548
            +A K YYE+L VP+ A + +IK+AY++LA+K+HPD+NQG++EA  +F EI  AYE+L+D++ R  YD YG    +Q   GGG
Sbjct:    1 MAKKDYYEILGVPKTADEREIKKAYKRLAMKFHPDRNQGDKEAEAKFKEIKEAYEILTDAQKRAAYDQYGHAAFEQGGMGGG 82          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_CAMJJ (Chaperone protein dnaJ OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 46/80 (57.50%), Postives = 60/80 (75.00%), Query Frame = 3
Query:  315 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            SYYE+L++ + A  E IK+AYRK+ALKYHPD+NQG++EA  +F  +N AYEVLS+ E R IYD YG++ LK    GGG G
Sbjct:    4 SYYELLEITQNADKETIKKAYRKMALKYHPDRNQGDKEAEDKFKLVNEAYEVLSNDEKRAIYDRYGKDALK----GGGFG 79          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_BURM1 (Chaperone protein dnaJ OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 43/82 (52.44%), Postives = 59/82 (71.95%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 548
            +A + YYEVL V + ASD++IK+AYRKLA+KYHPD+N  N++A + F E+  AYE+LSDS+ R  YD YG  G+  +  G G
Sbjct:    1 MAKRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDNKDAEEHFKEVKEAYEMLSDSQKRAAYDQYGHAGVDPNMGGAG 82          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPE (Chaperone protein dnaJ OS=Bordetella pertussis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 45/84 (53.57%), Postives = 59/84 (70.24%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            +A + YYEVL V + ASDE +K+AYRKLA+KYHPD+N  ++EA ++F E   AYEVL D + R  YD YG  G+  +AAG G G
Sbjct:    1 MAKRDYYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSKEAEEKFKEAKEAYEVLGDEQKRAAYDRYGHAGVDPNAAGMGGG 84          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPA (Chaperone protein dnaJ OS=Bordetella parapertussis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 45/84 (53.57%), Postives = 59/84 (70.24%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            +A + YYEVL V + ASDE +K+AYRKLA+KYHPD+N  ++EA ++F E   AYEVL D + R  YD YG  G+  +AAG G G
Sbjct:    1 MAKRDYYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSKEAEEKFKEAKEAYEVLGDEQKRAAYDRYGHAGVDPNAAGMGGG 84          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_BORBR (Chaperone protein dnaJ OS=Bordetella bronchiseptica GN=dnaJ PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 45/84 (53.57%), Postives = 59/84 (70.24%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            +A + YYEVL V + ASDE +K+AYRKLA+KYHPD+N  ++EA ++F E   AYEVL D + R  YD YG  G+  +AAG G G
Sbjct:    1 MAKRDYYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSKEAEEKFKEAKEAYEVLGDEQKRAAYDRYGHAGVDPNAAGMGGG 84          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_WOLTR (Chaperone protein dnaJ OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.118e-20
Identity = 48/78 (61.54%), Postives = 59/78 (75.64%), Query Frame = 3
Query:  312 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGG 545
            K YY++L V R AS ++IK+AY+KLALKYHPD+N GN+EA ++F EI  AYEVLSDSE R  YD YG EG    A+GG
Sbjct:    4 KDYYKLLGVDRNASTDEIKKAYKKLALKYHPDRNPGNKEAEEKFKEITAAYEVLSDSEKRAGYDRYGHEG----ASGG 77          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_RALME (Chaperone protein dnaJ OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.118e-20
Identity = 44/84 (52.38%), Postives = 61/84 (72.62%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            +A + YYEVL V + ASD++IK+AYRKLA+K+HPD+N  N+EA ++F E+  AYE+LSD E +  YD YG  G+  + AGG  G
Sbjct:    1 MAKRDYYEVLGVGKNASDDEIKKAYRKLAMKHHPDRNPDNKEAEEKFKEVKEAYEMLSDPEKKAAYDQYGHAGVDPNMAGGFGG 84          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEPW (Chaperone protein dnaJ OS=Pseudomonas putida (strain W619) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.118e-20
Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 3
Query:  312 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            + YYEVL V RGAS+  +K+AYR+LA+KYHPD+N G++E+  +F E N AYEVLSD+  R  +D YG  G+     GGG G
Sbjct:    4 RDYYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKESEDKFKEANEAYEVLSDASKRAAFDQYGHAGVDPSMGGGGAG 84          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEPG (Chaperone protein dnaJ OS=Pseudomonas putida (strain GB-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.118e-20
Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 3
Query:  312 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            + YYEVL V RGAS+  +K+AYR+LA+KYHPD+N G++E+  +F E N AYEVLSD+  R  +D YG  G+     GGG G
Sbjct:    4 RDYYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKESEDKFKEANEAYEVLSDASKRAAFDQYGHAGVDPSMGGGGAG 84          
The following BLAST results are available for this feature:
BLAST of CF510008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_ENTS86.216e-2050.00Chaperone protein dnaJ OS=Enterobacter sakazakii (... [more]
DNAJ_CAMJJ6.216e-2057.50Chaperone protein dnaJ OS=Campylobacter jejuni sub... [more]
DNAJ_BURM16.216e-2052.44Chaperone protein dnaJ OS=Burkholderia multivorans... [more]
DNAJ_BORPE6.216e-2053.57Chaperone protein dnaJ OS=Bordetella pertussis GN=... [more]
DNAJ_BORPA6.216e-2053.57Chaperone protein dnaJ OS=Bordetella parapertussis... [more]
DNAJ_BORBR6.216e-2053.57Chaperone protein dnaJ OS=Bordetella bronchiseptic... [more]
DNAJ_WOLTR8.118e-2061.54Chaperone protein dnaJ OS=Wolbachia sp. subsp. Bru... [more]
DNAJ_RALME8.118e-2052.38Chaperone protein dnaJ OS=Ralstonia metallidurans ... [more]
DNAJ_PSEPW8.118e-2053.09Chaperone protein dnaJ OS=Pseudomonas putida (stra... [more]
DNAJ_PSEPG8.118e-2053.09Chaperone protein dnaJ OS=Pseudomonas putida (stra... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-523 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510008 ID=CF510008; Name=CF510008; organism=Citrus sinensis; type=EST; length=556bp
CCTCGCCCAGTTCCTGGGACTTTTAACCGGCAACACCATCACCTGACCTC
ACTGATAATTTCCAAAGGAGAGAGAGAGAGAGAGAGAGACGACTTGCAGC
AACGACTTCTGAATTGACAGATAAAAATTAAAAAGAAAAAAATTATTGTA
ATCTCAGAATTTTGCTAAGATCTGAAAATTAAACCCTAGATTCTAAGTTT
CGGAGAGGCATTAAACTCTCTCCTCTTGTTGATCTATTAATGGCGCATCG
GCGAGCAAGGCTGTTGTTCCTATTGTGCGCACTTTGTTACGCCCTCAACG
TCATTGCGGGGAAGAGCTACTATGAAGTATTGCAAGTGCCGAGGGGAGCA
TCGGACGAGCAGATCAAAAGAGCGTATAGAAAGCTGGCATTGAAGTATCA
TCCTGATAAAAACCAGGGGAATGAAGAAGCTAATAAGCGATTTGCTGAGA
TTAACAATGCGTATGAGGTGTTATCGGATAGCGAAACGAGGAATATATAT
GATACATATGGAGAAGAGGGACTGAAACAGCATGCTGCTGGTGGAGGCAA
AGGTGG
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