CF510008

Overview
NameCF510008
Unique NameCF510008
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length556
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_PELLD (Chaperone protein dnaJ OS=Pelodictyon luteolum (strain DSM 273) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.118e-20
Identity = 45/81 (55.56%), Postives = 56/81 (69.14%), Query Frame = 3
Query:  312 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            + YYEVL V R A  ++IK+AYRKLALKYHPDKN  N++A   F E+N AYEVLS+ + R  YD +G  G+   AA GG G
Sbjct:    3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKDAEDHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGGG 83          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBL (Chaperone protein dnaJ OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.118e-20
Identity = 42/81 (51.85%), Postives = 60/81 (74.07%), Query Frame = 3
Query:  312 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            +SYY++L V + A+DE+IK AYRKLA+KYHPDKN+GN+E+ ++F E   AYE+L D + R  YD +G+ G+   A G G+G
Sbjct:    4 RSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVGAGAGGFGQG 84          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBJ (Chaperone protein dnaJ OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.118e-20
Identity = 42/81 (51.85%), Postives = 60/81 (74.07%), Query Frame = 3
Query:  312 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            +SYY++L V + A+DE+IK AYRKLA+KYHPDKN+GN+E+ ++F E   AYE+L D + R  YD +G+ G+   A G G+G
Sbjct:    4 RSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVGAGAGGFGQG 84          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLCH (Chaperone protein dnaJ OS=Chlorobium chlorochromatii (strain CaD3) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.118e-20
Identity = 44/81 (54.32%), Postives = 57/81 (70.37%), Query Frame = 3
Query:  312 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            K YYE L V R ++ + IK+AYRKLA++YHPDKN GN+EA + F E+N AYEVLS+ + R  YD +G  G+   AA GG G
Sbjct:    3 KDYYETLGVTRSSNKDDIKKAYRKLAVQYHPDKNPGNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGGG 83          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_BURXL (Chaperone protein dnaJ OS=Burkholderia xenovorans (strain LB400) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.118e-20
Identity = 43/82 (52.44%), Postives = 59/82 (71.95%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 548
            +A + YYEVL V + ASD++IK+AYRKLA+K+HPD+N GN++A   F E+  AYE+LSDS+ R  YD YG  G+  +  G G
Sbjct:    1 MAKRDYYEVLGVAKNASDDEIKKAYRKLAMKHHPDRNPGNKDAEGHFKEVKEAYEMLSDSQKRAAYDQYGHAGVDPNMGGAG 82          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_BURPP (Chaperone protein dnaJ OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.118e-20
Identity = 43/82 (52.44%), Postives = 59/82 (71.95%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 548
            +A + YYEVL V + ASD++IK+AYRKLA+K+HPD+N GN++A   F E+  AYE+LSDS+ R  YD YG  G+  +  G G
Sbjct:    1 MAKRDYYEVLGVAKNASDDEIKKAYRKLAMKHHPDRNPGNKDAEGHFKEVKEAYEMLSDSQKRAAYDQYGHAGVDPNMGGAG 82          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_BURP8 (Chaperone protein dnaJ OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.118e-20
Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 548
            +A + YY+VL V + ASD++IK+AYRKLA+K+HPD+N GN++A + F E   AYE+LSDS+ R  YD YG  G+  + AG G
Sbjct:    1 MAKRDYYQVLGVAKNASDDEIKKAYRKLAMKHHPDRNPGNKDAEEHFKEAKEAYEMLSDSQKRAAYDQYGHAGVDPNMAGAG 82          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DJB11_CANFA (DnaJ homolog subfamily B member 11 OS=Canis familiaris GN=DNAJB11 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 8.118e-20
Identity = 45/75 (60.00%), Postives = 58/75 (77.33%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK 527
            IAG+ +Y++L VPR AS + IK+AYRKLAL+ HPD+N  +  A ++F ++  AYEVLSDSE R  YDTYGEEGLK
Sbjct:   21 IAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPRAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLK 95          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: SCJ1_YEAST (DnaJ-related protein SCJ1 OS=Saccharomyces cerevisiae GN=SCJ1 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.060e-19
Identity = 40/85 (47.06%), Postives = 62/85 (72.94%), Query Frame = 3
Query:  300 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            +I  + YY +L++ + A++++IK AYR+L+ KYHPDKN G+EEA+++F E+  AY+VLSD E + IYD +G + +K    GGG G
Sbjct:   18 LILAQDYYAILEIDKDATEKEIKSAYRQLSKKYHPDKNAGSEEAHQKFIEVGEAYDVLSDPEKKKIYDQFGADAVKNGGGGGGPG 102          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_RALEJ (Chaperone protein dnaJ OS=Ralstonia eutropha (strain JMP134) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.060e-19
Identity = 43/84 (51.19%), Postives = 62/84 (73.81%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            +A + YYEVL V + ASD++IK+AYRKLA+KYHPD+N  ++E+ ++F E+  AYE+LSD+E +  YD YG  G+  + AGG  G
Sbjct:    1 MAKRDYYEVLGVGKNASDDEIKKAYRKLAMKYHPDRNPDSKESEEKFKEVKEAYEMLSDAEKKAAYDQYGHAGVDPNMAGGFGG 84          
The following BLAST results are available for this feature:
BLAST of CF510008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_PELLD8.118e-2055.56Chaperone protein dnaJ OS=Pelodictyon luteolum (st... [more]
DNAJ_LEPBL8.118e-2051.85Chaperone protein dnaJ OS=Leptospira borgpeterseni... [more]
DNAJ_LEPBJ8.118e-2051.85Chaperone protein dnaJ OS=Leptospira borgpeterseni... [more]
DNAJ_CHLCH8.118e-2054.32Chaperone protein dnaJ OS=Chlorobium chlorochromat... [more]
DNAJ_BURXL8.118e-2052.44Chaperone protein dnaJ OS=Burkholderia xenovorans ... [more]
DNAJ_BURPP8.118e-2052.44Chaperone protein dnaJ OS=Burkholderia phytofirman... [more]
DNAJ_BURP88.118e-2052.44Chaperone protein dnaJ OS=Burkholderia phymatum (s... [more]
DJB11_CANFA8.118e-2060.00DnaJ homolog subfamily B member 11 OS=Canis famili... [more]
SCJ1_YEAST1.060e-1947.06DnaJ-related protein SCJ1 OS=Saccharomyces cerevis... [more]
DNAJ_RALEJ1.060e-1951.19Chaperone protein dnaJ OS=Ralstonia eutropha (stra... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-523 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510008 ID=CF510008; Name=CF510008; organism=Citrus sinensis; type=EST; length=556bp
CCTCGCCCAGTTCCTGGGACTTTTAACCGGCAACACCATCACCTGACCTC
ACTGATAATTTCCAAAGGAGAGAGAGAGAGAGAGAGAGACGACTTGCAGC
AACGACTTCTGAATTGACAGATAAAAATTAAAAAGAAAAAAATTATTGTA
ATCTCAGAATTTTGCTAAGATCTGAAAATTAAACCCTAGATTCTAAGTTT
CGGAGAGGCATTAAACTCTCTCCTCTTGTTGATCTATTAATGGCGCATCG
GCGAGCAAGGCTGTTGTTCCTATTGTGCGCACTTTGTTACGCCCTCAACG
TCATTGCGGGGAAGAGCTACTATGAAGTATTGCAAGTGCCGAGGGGAGCA
TCGGACGAGCAGATCAAAAGAGCGTATAGAAAGCTGGCATTGAAGTATCA
TCCTGATAAAAACCAGGGGAATGAAGAAGCTAATAAGCGATTTGCTGAGA
TTAACAATGCGTATGAGGTGTTATCGGATAGCGAAACGAGGAATATATAT
GATACATATGGAGAAGAGGGACTGAAACAGCATGCTGCTGGTGGAGGCAA
AGGTGG
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