CF510008

Overview
NameCF510008
Unique NameCF510008
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length556
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_SALA4 (Chaperone protein dnaJ OS=Salmonella agona (strain SL483) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 42/84 (50.00%), Postives = 60/84 (71.43%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+D++ R  YD YG    +Q   GGG G
Sbjct:    1 MAKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQYGHAAFEQGGMGGGFG 84          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEF5 (Chaperone protein dnaJ OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 44/84 (52.38%), Postives = 58/84 (69.05%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            +A + YYEVL V RG+SD ++K+AYR+LA+K+HPD+N G++ +   F E N AYEVLSDS  R  YD YG  G+     GGG G
Sbjct:    1 MAKRDYYEVLGVERGSSDAELKKAYRRLAMKHHPDRNPGDKASEDMFKEANEAYEVLSDSSKRAAYDQYGHAGVDPSMGGGGGG 84          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_PHOLL (Chaperone protein dnaJ OS=Photorhabdus luminescens subsp. laumondii GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 41/82 (50.00%), Postives = 60/82 (73.17%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 548
            +A + YYEVL V + AS+++IK+AY++LA+KYHPD+NQG++EA  +F E+  AYE+L+D + R  YD YG    +Q   GGG
Sbjct:    1 MAKRDYYEVLGVSKTASEKEIKKAYKRLAMKYHPDRNQGDKEAESQFKEVKEAYEILTDDQKRAAYDQYGHAAFEQGGMGGG 82          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_HALHL (Chaperone protein dnaJ OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 43/84 (51.19%), Postives = 61/84 (72.62%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            +A + YYEVL V + ASD +IK+AYR++A K+HPD+N G+EE+ +RF E+  AYEVLSD++ R  YD +G  G+   A GG +G
Sbjct:    1 MAKRDYYEVLGVNKNASDAEIKKAYRRMAQKFHPDRNPGDEESAERFKEVKEAYEVLSDAQKRAAYDQFGHAGVDPSAGGGPRG 84          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATU (Chaperone protein dnaJ OS=Francisella tularensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = 3
Query:  312 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            K YYE+L + + AS  +IKRAYRKLA+KYHPD+N G++EA  +F EI+ AYE+LSD   R+ YD +G  G+ Q +  GG G
Sbjct:    4 KCYYEILNISKTASGVEIKRAYRKLAMKYHPDRNPGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVNQQSGFGGTG 84          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATH (Chaperone protein dnaJ OS=Francisella tularensis subsp. holarctica (strain LVS) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = 3
Query:  312 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            K YYE+L + + AS  +IKRAYRKLA+KYHPD+N G++EA  +F EI+ AYE+LSD   R+ YD +G  G+ Q +  GG G
Sbjct:    4 KCYYEILNISKTASGVEIKRAYRKLAMKYHPDRNPGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVNQQSGFGGTG 84          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOTE (Chaperone protein dnaJ OS=Clostridium tetani GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 47/81 (58.02%), Postives = 58/81 (71.60%), Query Frame = 3
Query:  312 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            K +YEVL V +GA+D +IK+A+RKLALKYHPDKN GN+EA +RF EIN AY+VLSD + R  YD +G         GGG G
Sbjct:    4 KDFYEVLGVEKGANDAEIKKAFRKLALKYHPDKNAGNKEAEERFKEINEAYQVLSDPQKRAQYDQFGTADFN----GGGAG 80          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLP8 (Chaperone protein dnaJ OS=Chlorobaculum parvum (strain NCIB 8327) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 44/79 (55.70%), Postives = 56/79 (70.89%), Query Frame = 3
Query:  312 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 548
            + YYE+L V R A  ++IK+AYRKLALKYHPDKN  N+EA ++F E N AYEVLS+ + R  YD +G  G+   AA GG
Sbjct:    3 RDYYEILGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEKFKEANEAYEVLSNDDKRRRYDQFGHAGVGSSAASGG 81          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_BURVG (Chaperone protein dnaJ OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 45/85 (52.94%), Postives = 61/85 (71.76%), Query Frame = 3
Query:  303 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAG-GGKG 554
            +A + YYEVL V + ASD++IK+AYRKLA+KYHPD+N  N++A + F E   AYE+LSD + R  YD YG  G+  + AG GG+G
Sbjct:    1 MAKRDYYEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDNKDAEEHFKEAKEAYEMLSDGQKRAAYDQYGHAGVDPNMAGAGGQG 85          
BLAST of CF510008 vs. ExPASy Swiss-Prot
Match: DNAJ_AZOSB (Chaperone protein dnaJ OS=Azoarcus sp. (strain BH72) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 3
Query:  312 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGKG 554
            + YYEVL V R A D++IK+AYRKLA+KYHPD+N  ++EA ++F E   AYEVLSD++ +  YD YG  G+     GGG G
Sbjct:    4 RDYYEVLGVNRDAGDDEIKKAYRKLAMKYHPDRNPDSKEAEEKFKEAKEAYEVLSDAQKKGAYDRYGHAGVDPSMGGGGGG 84          
The following BLAST results are available for this feature:
BLAST of CF510008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_SALA41.385e-1950.00Chaperone protein dnaJ OS=Salmonella agona (strain... [more]
DNAJ_PSEF51.385e-1952.38Chaperone protein dnaJ OS=Pseudomonas fluorescens ... [more]
DNAJ_PHOLL1.385e-1950.00Chaperone protein dnaJ OS=Photorhabdus luminescens... [more]
DNAJ_HALHL1.385e-1951.19Chaperone protein dnaJ OS=Halorhodospira halophila... [more]
DNAJ_FRATU1.385e-1953.09Chaperone protein dnaJ OS=Francisella tularensis G... [more]
DNAJ_FRATH1.385e-1953.09Chaperone protein dnaJ OS=Francisella tularensis s... [more]
DNAJ_CLOTE1.385e-1958.02Chaperone protein dnaJ OS=Clostridium tetani GN=dn... [more]
DNAJ_CHLP81.385e-1955.70Chaperone protein dnaJ OS=Chlorobaculum parvum (st... [more]
DNAJ_BURVG1.385e-1952.94Chaperone protein dnaJ OS=Burkholderia vietnamiens... [more]
DNAJ_AZOSB1.385e-1953.09Chaperone protein dnaJ OS=Azoarcus sp. (strain BH7... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-523 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510008 ID=CF510008; Name=CF510008; organism=Citrus sinensis; type=EST; length=556bp
CCTCGCCCAGTTCCTGGGACTTTTAACCGGCAACACCATCACCTGACCTC
ACTGATAATTTCCAAAGGAGAGAGAGAGAGAGAGAGAGACGACTTGCAGC
AACGACTTCTGAATTGACAGATAAAAATTAAAAAGAAAAAAATTATTGTA
ATCTCAGAATTTTGCTAAGATCTGAAAATTAAACCCTAGATTCTAAGTTT
CGGAGAGGCATTAAACTCTCTCCTCTTGTTGATCTATTAATGGCGCATCG
GCGAGCAAGGCTGTTGTTCCTATTGTGCGCACTTTGTTACGCCCTCAACG
TCATTGCGGGGAAGAGCTACTATGAAGTATTGCAAGTGCCGAGGGGAGCA
TCGGACGAGCAGATCAAAAGAGCGTATAGAAAGCTGGCATTGAAGTATCA
TCCTGATAAAAACCAGGGGAATGAAGAAGCTAATAAGCGATTTGCTGAGA
TTAACAATGCGTATGAGGTGTTATCGGATAGCGAAACGAGGAATATATAT
GATACATATGGAGAAGAGGGACTGAAACAGCATGCTGCTGGTGGAGGCAA
AGGTGG
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