CF510014

Overview
NameCF510014
Unique NameCF510014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length446
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL19_ARATH (Putative germin-like protein subfamily 1 member 9 OS=Arabidopsis thaliana GN=At5g38910 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 2.641e-39
Identity = 79/135 (58.52%), Postives = 90/135 (66.67%), Query Frame = 3
Query:   39 MKAVQFLSGFXXXXXXXXXXXXYDPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN 443
            MK+  FL+               DPS LQD CV +N P DGVFVNGKFCKDPKL   EDFF +GL +      + G +VT  NV  +PGLNTLGIS VRIDY  YGQNPPHTHPRA+E+L V  GTL+VGFVTSN
Sbjct:    1 MKSFSFLAVLSILAITLSLSKASDPSSLQDFCVGVNTPADGVFVNGKFCKDPKLVTVEDFFFTGLHEARPPNPKTGSNVTAVNVNNLPGLNTLGISLVRIDYGVYGQNPPHTHPRASEVLYVAVGTLFVGFVTSN 135          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL112_ARATH (Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 4.505e-39
Identity = 76/112 (67.86%), Postives = 89/112 (79.46%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNT-ANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS 440
            DPSPLQD C+ +N P + +FVNGKFCKDPKL  A+DF+ SGLDK   T ++ +G +VT  NV QIPGLNTLGIS VRIDY   GQNPPHTHPRATEIL+V EGTL+VGF +S
Sbjct:   26 DPSPLQDFCIGVNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGFFSS 137          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GLP1_MESCR (Germin-like protein OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.004e-38
Identity = 71/112 (63.39%), Postives = 82/112 (73.21%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN 443
            DP+ LQD CV +N P DG+FVNG FCKDP     +DF   GL+ P NT N LGF+ T      +PGLNTLGIS  R+D+AP+G NPPHTHPRATE+ VVLEGT YVGFVTSN
Sbjct:   24 DPTQLQDFCVGVNKPNDGLFVNGLFCKDPMEVNPDDFLFRGLNMPANTDNALGFAATLVTAANLPGLNTLGISVARLDFAPHGLNPPHTHPRATEVFVVLEGTFYVGFVTSN 135          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL12_ARATH (Putative germin-like protein subfamily 1 member 2 OS=Arabidopsis thaliana GN=At3g04150 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.712e-38
Identity = 76/113 (67.26%), Postives = 92/113 (81.42%), Query Frame = 3
Query:  105 YDPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN 443
            YDP+PLQD CVA N   + VFVNGKFCKDPKL  A DFF SGL+ PGNT+NRLG SVT+ +V +IPGLNTLGI+  R+D+AP GQ PPH HPRA++I++VL+G L VGFV+SN
Sbjct:   25 YDPNPLQDYCVATNGT-NRVFVNGKFCKDPKLVTANDFFYSGLNIPGNTSNRLGASVTDVDVRRIPGLNTLGIAIARLDFAPGGQLPPHIHPRASQIILVLKGQLSVGFVSSN 136          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL111_ARATH (Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.449e-37
Identity = 80/135 (59.26%), Postives = 91/135 (67.41%), Query Frame = 3
Query:   39 MKAVQFLSGFXXXXXXXXXXXXYDPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN 443
            MK++ FL+               DPS LQD CV+ N   +GVFVNGKFCKDPKL  A+DFF SGL       + +G +VT  NV  + GLNTLGIS VRIDYA  GQNPPHTHPRATEILVV +GTL VGFVTSN
Sbjct:    3 MKSLSFLAVLSLLALTLPLAIASDPSQLQDFCVSANTSANGVFVNGKFCKDPKLVTADDFFFSGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRATEILVVEQGTLLVGFVTSN 137          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL110_ARATH (Germin-like protein subfamily 1 member 10 OS=Arabidopsis thaliana GN=At5g38930 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 9.393e-37
Identity = 79/135 (58.52%), Postives = 89/135 (65.93%), Query Frame = 3
Query:   39 MKAVQFLSGFXXXXXXXXXXXXYDPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN 443
            MK++ FL+               DPS LQD CV+ N   +GVFVNGKFCKDPKL  A+DFF  GL       + +G +VT  NV  + GLNTLGIS VRIDYA  GQNPPHTHPRATEILVV  GTL VGFVTSN
Sbjct:    3 MKSLSFLAALSLLALTLPLTIASDPSQLQDFCVSANSSANGVFVNGKFCKDPKLVTADDFFFPGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVDGQNPPHTHPRATEILVVELGTLLVGFVTSN 137          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.227e-36
Identity = 76/112 (67.86%), Postives = 81/112 (72.32%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN 443
            DPS LQD CVA  D    V VNG  CKDP     EDFF SGL   GNT+NR G +VT  NV QI GLNTLGIS  R+DYAPYG NPPH HPRATEIL +LEG+LYVGFVTSN
Sbjct:   23 DPSQLQDFCVA--DKMSQVLVNGFACKDPAAITVEDFFFSGLHMAGNTSNRQGSAVTGVNVAQISGLNTLGISLARVDYAPYGLNPPHIHPRATEILTILEGSLYVGFVTSN 132          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL13_ARATH (Germin-like protein subfamily 1 member 3 OS=Arabidopsis thaliana GN=At3g04170 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 2.314e-35
Identity = 73/113 (64.60%), Postives = 88/113 (77.88%), Query Frame = 3
Query:  105 YDPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN 443
            YDPSPLQD CVA+ + K+GVFVNG+FCKDPKL  ++DFF SGL+ PGNT  RLG  V  AN   IPGLNTLG+   RID+AP G  PPH HPRA+EI++V++G L VGFV+SN
Sbjct:   25 YDPSPLQDYCVAVPE-KNGVFVNGEFCKDPKLVTSDDFFASGLNIPGNTNKRLGSFVNPAN---IPGLNTLGVGIARIDFAPGGLIPPHIHPRASEIILVIKGKLLVGFVSSN 133          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL23_ORYSJ (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 3.022e-35
Identity = 76/112 (67.86%), Postives = 83/112 (74.11%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN 443
            DPS LQD+CVA  D    V VNG  CKD +   AEDFF SGL   GNT N+ G +VT  NV Q+PGLNTLGIS  RIDYA +G NPPHTHPRATEIL VLEG+LYVGFVTSN
Sbjct:   30 DPSHLQDLCVA--DKASTVRVNGVACKDGEDVAAEDFFFSGLHMAGNTTNKQGSAVTAVNVAQVPGLNTLGISLARIDYALHGLNPPHTHPRATEILTVLEGSLYVGFVTSN 139          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL16_ARATH (Germin-like protein subfamily 1 member 6 OS=Arabidopsis thaliana GN=At3g04200 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 3.022e-35
Identity = 73/114 (64.04%), Postives = 86/114 (75.44%), Query Frame = 3
Query:  105 YDPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQ 446
            YDP+PLQD CVA ++  + VFVNGKFCKDPK   A DF  SGL+   NT N LG +VT  +V +IPGLNTLG+S  R+D+A  GQNPPH HPRATEILVV +G L VGFV+SNQ
Sbjct:   26 YDPNPLQDFCVAASET-NRVFVNGKFCKDPKSVTANDFSYSGLNIARNTTNFLGSNVTTVDVNKIPGLNTLGVSLARLDFAQGGQNPPHIHPRATEILVVTKGKLLVGFVSSNQ 138          
The following BLAST results are available for this feature:
BLAST of CF510014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
GL19_ARATH2.641e-3958.52Putative germin-like protein subfamily 1 member 9 ... [more]
GL112_ARATH4.505e-3967.86Putative germin-like protein subfamily 1 member 12... [more]
GLP1_MESCR1.004e-3863.39Germin-like protein OS=Mesembryanthemum crystallin... [more]
GL12_ARATH1.712e-3867.26Putative germin-like protein subfamily 1 member 2 ... [more]
GL111_ARATH1.449e-3759.26Germin-like protein subfamily 1 member 11 OS=Arabi... [more]
GL110_ARATH9.393e-3758.52Germin-like protein subfamily 1 member 10 OS=Arabi... [more]
GL21_ORYSJ1.227e-3667.86Putative germin-like protein 2-1 OS=Oryza sativa s... [more]
GL13_ARATH2.314e-3564.60Germin-like protein subfamily 1 member 3 OS=Arabid... [more]
GL23_ORYSJ3.022e-3567.86Putative germin-like protein 2-3 OS=Oryza sativa s... [more]
GL16_ARATH3.022e-3564.04Germin-like protein subfamily 1 member 6 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-529 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510014 ID=CF510014; Name=CF510014; organism=Citrus sinensis; type=EST; length=446bp
ACACTACCCAAAAAAAAAATTGATATAAATTAATCAAAATGAAAGCTGTT
CAATTTCTTTCAGGTTTTGCTCTCTTGGCTTTGGCTTCTTTATTGGCCTC
TGCCTATGACCCCAGCCCTCTTCAAGATATCTGTGTCGCCATCAATGATC
CCAAGGATGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTT
GCGAAAGCAGAAGATTTCTTTTTATCAGGGCTAGACAAGCCTGGAAACAC
AGCAAATCGACTTGGCTTTAGTGTGACAAATGCAAATGTTGAGCAAATTC
CAGGACTTAACACTCTTGGCATATCAGCAGTCCGTATTGACTACGCGCCA
TACGGTCAAAATCCACCTCACACTCACCCCCGTGCCACTGAAATCCTGGT
GGTCCTGGAAGGAACTCTTTATGTTGGTTTTGTGACATCGAACCAA
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