CF510014

Overview
NameCF510014
Unique NameCF510014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length446
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL15_ARATH (Germin-like protein subfamily 1 member 5 OS=Arabidopsis thaliana GN=At3g04190 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 3.022e-35
Identity = 67/114 (58.77%), Postives = 88/114 (77.19%), Query Frame = 3
Query:  105 YDPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQ 446
            Y+PSPLQD CVA N+  +GV+VNGKFCKDPK   A DF+ SGL+ PGNT+   G  +T  +V+++PGLNTLG+   RID+AP G  PPHTHPR +EI +V++G L+VGFV+SN+
Sbjct:   25 YEPSPLQDYCVATNET-NGVYVNGKFCKDPKCVTANDFYTSGLNVPGNTSTGPGVKITVVDVKRMPGLNTLGVDIARIDFAPGGLYPPHTHPRGSEIFLVMKGKLFVGFVSSNE 137          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL812_ORYSJ (Germin-like protein 8-12 OS=Oryza sativa subsp. japonica GN=Os08g0231400 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 3.947e-35
Identity = 76/114 (66.67%), Postives = 83/114 (72.81%), Query Frame = 3
Query:  105 YDPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN 443
            YDPSPLQD CVA  D    V VNG  CK+P    +EDFF +   D P NT N+LG +VTN NV + PGLNTLGIS  RIDYAP G NPPH HPRATE+L VLEGTLYVGFVTSN
Sbjct:   24 YDPSPLQDFCVA--DMNSPVRVNGFACKNPMDVSSEDFFNAAKFDMPRNTFNKLGSNVTNLNVMEFPGLNTLGISLARIDYAPMGVNPPHIHPRATELLTVLEGTLYVGFVTSN 135          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL41_ORYSJ (Germin-like protein 4-1 OS=Oryza sativa subsp. japonica GN=Os04g0617900 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 6.732e-35
Identity = 76/114 (66.67%), Postives = 82/114 (71.93%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFL-SGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQ 446
            DPS LQD CVA  D    VFVNG  CK+PK   A DFFL   L  PGNT N  G +VT   V ++PGLNTLGIS  RID+AP GQNPPHTHPRATEIL VL+GTL VGFVTSNQ
Sbjct:   29 DPSQLQDFCVA--DKLSAVFVNGFVCKNPKQVTANDFFLPKALGVPGNTVNAQGSAVTPVTVNELPGLNTLGISFARIDFAPNGQNPPHTHPRATEILTVLQGTLLVGFVTSNQ 140          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL82_ORYSJ (Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.148e-34
Identity = 76/114 (66.67%), Postives = 87/114 (76.32%), Query Frame = 3
Query:  108 DPSPLQDICVA-INDPKDGVFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN 443
            DPSPLQD CVA +N P   V VNG  CK+P  A A+DFF +  LDKP +T N++G +VT  NV Q+PGLNTLGIS  R+D+AP G NPPHTHPRATEI  VLEGTLYVGFVTSN
Sbjct:   26 DPSPLQDFCVADLNSP---VRVNGFVCKNPMNASADDFFKAAMLDKPRDTNNKVGSNVTLVNVLQLPGLNTLGISIARLDFAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSN 136          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL86_ORYSJ (Germin-like protein 8-6 OS=Oryza sativa subsp. japonica GN=Os08g0189500 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.558e-34
Identity = 78/113 (69.03%), Postives = 83/113 (73.45%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN 443
            DPSPLQD CVA  D    V VNG  C DPK   A+ FF +  LD P  T N++G +VT  NV QIPGLNTLGIS  RIDYAP GQNPPHTHPRATEIL VLEGTLYVGFVTSN
Sbjct:   25 DPSPLQDFCVA--DEHSPVLVNGFACLDPKHVNADHFFKAAMLDTPRKT-NKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSN 134          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL87_ORYSJ (Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 3.341e-34
Identity = 77/113 (68.14%), Postives = 83/113 (73.45%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN 443
            DPSPLQD CVA  D    V VNG  C DPK   A+ FF +  LD P  T N++G +VT  NV QIPGLNTLGIS  RIDYAP G+NPPHTHPRATEIL VLEGTLYVGFVTSN
Sbjct:   25 DPSPLQDFCVA--DKHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKT-NKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSN 134          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL88_ORYSJ (Germin-like protein 8-8 OS=Oryza sativa subsp. japonica GN=Os08g0189700 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 4.363e-34
Identity = 77/113 (68.14%), Postives = 83/113 (73.45%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN 443
            DPSPLQD CVA  D    V VNG  C DPK   A+ FF +  LD P  T N++G +VT  NV QIPGLNTLGIS  RIDYAP G+NPPHTHPRATEIL VLEGTLYVGFVTSN
Sbjct:   24 DPSPLQDFCVA--DKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKT-NKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSN 133          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL810_ORYSJ (Germin-like protein 8-10 OS=Oryza sativa subsp. japonica GN=GLP2 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 4.363e-34
Identity = 77/113 (68.14%), Postives = 83/113 (73.45%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN 443
            DPSPLQD CVA  D    V VNG  C DPK   A+ FF +  LD P  T N++G +VT  NV QIPGLNTLGIS  RIDYAP G+NPPHTHPRATEIL VLEGTLYVGFVTSN
Sbjct:   24 DPSPLQDFCVA--DMHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKT-NKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSN 133          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL89_ORYSJ (Germin-like protein 8-9 OS=Oryza sativa subsp. japonica GN=Os08g0189850 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 7.443e-34
Identity = 77/113 (68.14%), Postives = 83/113 (73.45%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN 443
            DPSPLQD CVA  D    V VNG  C DPK   A+ FF +  LD P  T N++G +VT  NV QIPGLNTLGIS  RIDYAP GQNPPHTHPRATEIL VLEGTL+VGFVTSN
Sbjct:   24 DPSPLQDFCVA--DKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKT-NKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLHVGFVTSN 133          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL81_ORYSJ (Putative germin-like protein 8-1 OS=Oryza sativa subsp. japonica GN=Os08g0188900 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 7.443e-34
Identity = 75/114 (65.79%), Postives = 86/114 (75.44%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTA-NRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN 443
            +PSPLQD CVA  D    V VNG  CK+P    A+DFF +  LDKP +TA N++G ++T  NV +IPGLNTLGIS VR+DYAP G NPPHTHPRATEI  VLEGTLYVGFVTSN
Sbjct:   25 EPSPLQDFCVA--DLNSAVRVNGFACKNPTNVSADDFFKAAMLDKPRDTAVNKVGSNITLINVMEIPGLNTLGISIVRVDYAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSN 136          
The following BLAST results are available for this feature:
BLAST of CF510014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
GL15_ARATH3.022e-3558.77Germin-like protein subfamily 1 member 5 OS=Arabid... [more]
GL812_ORYSJ3.947e-3566.67Germin-like protein 8-12 OS=Oryza sativa subsp. ja... [more]
GL41_ORYSJ6.732e-3566.67Germin-like protein 4-1 OS=Oryza sativa subsp. jap... [more]
GL82_ORYSJ1.148e-3466.67Germin-like protein 8-2 OS=Oryza sativa subsp. jap... [more]
GL86_ORYSJ2.558e-3469.03Germin-like protein 8-6 OS=Oryza sativa subsp. jap... [more]
GL87_ORYSJ3.341e-3468.14Germin-like protein 8-7 OS=Oryza sativa subsp. jap... [more]
GL88_ORYSJ4.363e-3468.14Germin-like protein 8-8 OS=Oryza sativa subsp. jap... [more]
GL810_ORYSJ4.363e-3468.14Germin-like protein 8-10 OS=Oryza sativa subsp. ja... [more]
GL89_ORYSJ7.443e-3468.14Germin-like protein 8-9 OS=Oryza sativa subsp. jap... [more]
GL81_ORYSJ7.443e-3465.79Putative germin-like protein 8-1 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-529 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510014 ID=CF510014; Name=CF510014; organism=Citrus sinensis; type=EST; length=446bp
ACACTACCCAAAAAAAAAATTGATATAAATTAATCAAAATGAAAGCTGTT
CAATTTCTTTCAGGTTTTGCTCTCTTGGCTTTGGCTTCTTTATTGGCCTC
TGCCTATGACCCCAGCCCTCTTCAAGATATCTGTGTCGCCATCAATGATC
CCAAGGATGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTT
GCGAAAGCAGAAGATTTCTTTTTATCAGGGCTAGACAAGCCTGGAAACAC
AGCAAATCGACTTGGCTTTAGTGTGACAAATGCAAATGTTGAGCAAATTC
CAGGACTTAACACTCTTGGCATATCAGCAGTCCGTATTGACTACGCGCCA
TACGGTCAAAATCCACCTCACACTCACCCCCGTGCCACTGAAATCCTGGT
GGTCCTGGAAGGAACTCTTTATGTTGGTTTTGTGACATCGAACCAA
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