CF510014

Overview
NameCF510014
Unique NameCF510014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length446
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL24_ARATH (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana GN=GLP10 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 5.897e-31
Identity = 66/112 (58.93%), Postives = 78/112 (69.64%), Query Frame = 3
Query:  105 YDPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS 440
            YDP  LQD+CVA  D   G+ VNG  CK      A DFF +G+ KP    N +G +VT ANVE+I GLNTLG+S  RIDYAP G NPPHTHPRATE++ VLEG L VGF+T+
Sbjct:   22 YDPDTLQDLCVA--DRTSGIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVGFITT 131          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.006e-30
Identity = 68/111 (61.26%), Postives = 77/111 (69.37%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS 440
            DP  LQD+CVA  D   G+ +NG  CKD     + DFF  GL KPG T N  G  VT ANV  IPGLNTLG+S  RIDYAP G NPPHTHPRATE++ VLEGTL VGF+T+
Sbjct:   24 DPDMLQDLCVA--DLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFLTT 132          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL11_ORYSJ (Germin-like protein 1-1 OS=Oryza sativa subsp. japonica GN=GER4 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 8.516e-30
Identity = 67/111 (60.36%), Postives = 78/111 (70.27%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS 440
            DP  LQD+CVA  D    V +NG  CK      A+DFF +GL  PGNT N  G +VT ANV+  PG+NTLG+S  RIDYAP GQNPPHTHPRATEI+ VLEG L VGF+T+
Sbjct:   26 DPDMLQDVCVA--DLASPVKLNGFPCKAN--VTADDFFFAGLKNPGNTNNPAGSNVTAANVQSFPGVNTLGVSMARIDYAPGGQNPPHTHPRATEIIFVLEGVLEVGFITT 132          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL22_ARATH (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.897e-29
Identity = 63/112 (56.25%), Postives = 77/112 (68.75%), Query Frame = 3
Query:  105 YDPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS 440
            YDP  LQD+CVA  D   G  +NG  CK+       DFF +G+ KP    + +G +VT ANVE+IPGLNTL +S  RIDYAP G NPPHTHPRATE++ VLEG L VGF+T+
Sbjct:   23 YDPDALQDLCVA--DKSHGTKLNGFPCKETLNITESDFFFAGISKPAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFITT 132          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL13_ORYSJ (Germin-like protein 1-3 OS=Oryza sativa subsp. japonica GN=GER8 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.897e-29
Identity = 65/112 (58.04%), Postives = 79/112 (70.54%), Query Frame = 3
Query:  108 DPSPLQDICVA-INDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS 440
            DP  LQD+CVA     K  + +NG  CK  +   A DFF  GL K GNT N +G  VT A+VE +PGLNT+G+S  RIDYAP+G NPPHTHPRATEI+ V+EG+L VGFVT+
Sbjct:   24 DPDMLQDVCVADYKSLKGPLRLNGFPCKRIENVTANDFFFDGLMKAGNTGNAVGSVVTAASVESLPGLNTMGVSMARIDYAPWGLNPPHTHPRATEIIFVVEGSLDVGFVTT 135          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL32_ORYSJ (Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica GN=Os03g0651800 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.606e-28
Identity = 64/112 (57.14%), Postives = 77/112 (68.75%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVF-VNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS 440
            DP  LQD+CVA      G   +NG  CK  +   A DFF  GL   GNT N +G  VT A+VE++PGLNT+G+S  RIDYAP+G +PPHTHPRATEI+ V EGTL VGFVT+
Sbjct:   24 DPDMLQDVCVADYKSLRGPLRLNGIPCKRLENVTANDFFFDGLTNAGNTTNAVGSLVTAASVERLPGLNTMGVSMARIDYAPWGLSPPHTHPRATEIMFVAEGTLDVGFVTT 135          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL52_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.739e-28
Identity = 66/111 (59.46%), Postives = 76/111 (68.47%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS 440
            DP  LQDICVA  D    V VNG  CK       +DF+  GL   GNT N  G  VT ANVE++PGLNTLG+S  RIDYAP G NPPHTHPRATE++ VL+GTL VGF+T+
Sbjct:   27 DPDLLQDICVA--DLTSAVKVNGFACK--AAVTEDDFYFKGLAAAGNTNNTYGSVVTGANVEKLPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLQGTLDVGFITT 133          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 6.103e-28
Identity = 65/111 (58.56%), Postives = 75/111 (67.57%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS 440
            D   LQD+CVA  D    + VNG  CK      AEDFF + L K G T N  G  VT ANV++IPGLNTLG+S  RIDYAP G NPPHTHPRATE++ VLEG L VGF+T+
Sbjct:   22 DADALQDLCVA--DYASVILVNGFACKPASNVTAEDFFSNLLVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLEGQLDVGFITT 130          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL23_ARATH (Germin-like protein subfamily 2 member 3 OS=Arabidopsis thaliana GN=GLP8 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 6.103e-28
Identity = 64/112 (57.14%), Postives = 78/112 (69.64%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANR-LGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS 440
            D + LQD CVA  D  +G+ VNG  CKDP     EDF+  GL     TAN  +G +VT ANVE++PGLNTLG+S  RIDYAP G NPPH HPRA+E + VLEG L+VGF+T+
Sbjct:   23 DTNMLQDFCVA--DLSNGLKVNGYPCKDPAKVTPEDFYFIGLATAAATANSSMGSAVTGANVEKVPGLNTLGVSISRIDYAPGGLNPPHLHPRASEAIFVLEGRLFVGFLTT 132          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL25_ARATH (Probable germin-like protein subfamily 2 member 5 OS=Arabidopsis thaliana GN=At5g26700 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 1.776e-27
Identity = 63/107 (58.88%), Postives = 72/107 (67.29%), Query Frame = 3
Query:  120 LQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS 440
            LQD+CVA  D  + V VNG  CKD      EDF+  GL     T    G  VT ANVE++PGLNTLG+S  RIDYAP G NPPH HPRA+EI+ VLEG LYVGFVT+
Sbjct:   25 LQDVCVA--DLSNAVKVNGYTCKDSTQITPEDFYFKGLANIAATNTSTGSVVTGANVEKLPGLNTLGLSMSRIDYAPNGLNPPHVHPRASEIIFVLEGQLYVGFVTT 129          
The following BLAST results are available for this feature:
BLAST of CF510014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
GL24_ARATH5.897e-3158.93Germin-like protein subfamily 2 member 4 OS=Arabid... [more]
GL21_ARATH1.006e-3061.26Germin-like protein subfamily 2 member 1 OS=Arabid... [more]
GL11_ORYSJ8.516e-3060.36Germin-like protein 1-1 OS=Oryza sativa subsp. jap... [more]
GL22_ARATH1.897e-2956.25Germin-like protein subfamily 2 member 2 OS=Arabid... [more]
GL13_ORYSJ1.897e-2958.04Germin-like protein 1-3 OS=Oryza sativa subsp. jap... [more]
GL32_ORYSJ1.606e-2857.14Putative germin-like protein 3-2 OS=Oryza sativa s... [more]
GL52_ORYSJ2.739e-2859.46Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
RHRE_PEA6.103e-2858.56Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1... [more]
GL23_ARATH6.103e-2857.14Germin-like protein subfamily 2 member 3 OS=Arabid... [more]
GL25_ARATH1.776e-2758.88Probable germin-like protein subfamily 2 member 5 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-529 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510014 ID=CF510014; Name=CF510014; organism=Citrus sinensis; type=EST; length=446bp
ACACTACCCAAAAAAAAAATTGATATAAATTAATCAAAATGAAAGCTGTT
CAATTTCTTTCAGGTTTTGCTCTCTTGGCTTTGGCTTCTTTATTGGCCTC
TGCCTATGACCCCAGCCCTCTTCAAGATATCTGTGTCGCCATCAATGATC
CCAAGGATGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTT
GCGAAAGCAGAAGATTTCTTTTTATCAGGGCTAGACAAGCCTGGAAACAC
AGCAAATCGACTTGGCTTTAGTGTGACAAATGCAAATGTTGAGCAAATTC
CAGGACTTAACACTCTTGGCATATCAGCAGTCCGTATTGACTACGCGCCA
TACGGTCAAAATCCACCTCACACTCACCCCCGTGCCACTGAAATCCTGGT
GGTCCTGGAAGGAACTCTTTATGTTGGTTTTGTGACATCGAACCAA
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