CF510014

Overview
NameCF510014
Unique NameCF510014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length446
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL14_ORYSJ (Germin-like protein 1-4 OS=Oryza sativa subsp. japonica GN=Os01g0952100 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 3.349e-26
Identity = 65/115 (56.52%), Postives = 76/115 (66.09%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVF-VNGKFCKDPKLAKAEDFFLSGLDKPGN--TANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPY-GQNPPHTHPRATEILVVLEGTLYVGFVTS 440
            DP  LQDICVA      G   VNG  CK      AEDFF  GL KP +  + N +G +VT A VE+IPGLNTLG+S  R+DYAP+ G NPPH+HPRATEIL V +G L VGFV +
Sbjct:   29 DPDMLQDICVADYKSLQGPLRVNGFPCKPEANVTAEDFFFPGLGKPADVYSGNPMGSAVTAATVERIPGLNTLGVSMARVDYAPWGGANPPHSHPRATEILFVADGLLEVGFVVA 143          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: NEC1_NICPL (Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 4.374e-26
Identity = 63/111 (56.76%), Postives = 74/111 (66.67%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS 440
            D   LQD+CVA  D    V VNG  CK      A DF    + KPG T N+ G  VT ANVEQ+PGLNTLG+S  RIDYAP G NPPHTHPRA+E++ V+EG L VGF+T+
Sbjct:   34 DEDMLQDVCVA--DLHSKVKVNGFPCKTN--FTAADFSSFAISKPGATNNKFGSKVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITT 140          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 7.460e-26
Identity = 63/111 (56.76%), Postives = 74/111 (66.67%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS 440
            D   LQD+CVA  D    V VNG  CK      A DF    + KPG T N+ G  VT ANVEQ+PGLNTLG+S  RIDYAP G NPPHTHPRA+E++ V+EG L VGF+T+
Sbjct:   34 DEDMLQDVCVA--DLHSKVKVNGFPCKTN--FTAADFSSLAISKPGATNNKFGSVVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITT 140          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL51_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0197200 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.273e-25
Identity = 65/119 (54.62%), Postives = 77/119 (64.71%), Query Frame = 3
Query:  105 YDPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKP------GNTANR-LGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS 440
            +DP+PLQD CVA  DP   V VNG  CKDP    A+DFF SG+ +P      G TA+R  GF+  + +   IPGLNTLG SA R+D AP G  PPH HPRA+E  VVL G +Y GFVTS
Sbjct:   29 FDPNPLQDFCVA--DPTSKVRVNGLPCKDPAAVTADDFFFSGVGEPAAGGGRGATASRRYGFTARSVD---IPGLNTLGASAARVDVAPGGVFPPHYHPRASETAVVLAGAVYFGFVTS 142          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GLT2_ARATH (Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 6.982e-24
Identity = 58/112 (51.79%), Postives = 73/112 (65.18%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN 443
            D  PLQD CV   D K    +NG  CK      A DFF SGL  P NT+   G +V+ ANV   PGLNTLG+S   +++AP G NPPH+HPRATE  VV+EG+++VGF+T+N
Sbjct:   29 DSDPLQDFCVG--DLKASPSINGFPCKSS--VSASDFFFSGLGGPLNTSTPNGVAVSPANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSVFVGFLTTN 136          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GER3_WHEAT (Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 3.465e-23
Identity = 58/111 (52.25%), Postives = 71/111 (63.96%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS 440
            +P PLQD CVA  D K  V VNG  CK    A  +  F S L K GNT+   G +VT+ NV + PG NTLG+S  R+D+AP G NPPH HPRATEI +V++G L VG + S
Sbjct:   25 NPHPLQDFCVADLDGK-AVSVNGHMCKPMSEAGDDFLFSSKLAKAGNTSTPNGSAVTDLNVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGS 134          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GLT1_ARATH (Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana GN=GLP1 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 4.526e-23
Identity = 57/112 (50.89%), Postives = 71/112 (63.39%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN 443
            D  PLQD CV   D K    +NG  CK      A DFF SGL  P +T+N  G +V  ANV   PGLNTLGIS   ++ AP G NPPH HPRATE+  V+EG+++VGF+++N
Sbjct:   29 DSDPLQDFCVG--DLKASASINGFPCKSA--VSASDFFYSGLGGPLDTSNPNGVTVAPANVLTFPGLNTLGISMNNVELAPGGVNPPHLHPRATEVGTVIEGSVFVGFLSTN 136          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GER2_WHEAT (Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 5.911e-23
Identity = 58/111 (52.25%), Postives = 70/111 (63.06%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS 440
            DP PLQD CVA  D K  V VNG  CK    A  +  F S L K GNT+   G +VT  +V + PG NTLG+S  R+D+AP G NPPH HPRATEI +V++G L VG + S
Sbjct:   25 DPDPLQDFCVADLDGK-AVSVNGHTCKPMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGS 134          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: OXO2_HORVU (Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 7.720e-23
Identity = 58/111 (52.25%), Postives = 70/111 (63.06%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS 440
            DP PLQD CVA  D K  V VNG  CK    A  +  F S L K GNT+   G +VT  +V + PG NTLG+S  R+D+AP G NPPH HPRATEI +V++G L VG + S
Sbjct:   25 DPDPLQDFCVADLDGK-AVSVNGHPCKPMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHVHPRATEIGIVMKGELLVGILGS 134          
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: OXO1_HORVU (Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 7.720e-23
Identity = 58/111 (52.25%), Postives = 70/111 (63.06%), Query Frame = 3
Query:  108 DPSPLQDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS 440
            DP PLQD CVA  D K  V VNG  CK    A  +  F S L K GNT+   G +VT  +V + PG NTLG+S  R+D+AP G NPPH HPRATEI +V++G L VG + S
Sbjct:    2 DPDPLQDFCVADLDGK-AVSVNGHTCKPMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGS 111          
The following BLAST results are available for this feature:
BLAST of CF510014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
GL14_ORYSJ3.349e-2656.52Germin-like protein 1-4 OS=Oryza sativa subsp. jap... [more]
NEC1_NICPL4.374e-2656.76Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE... [more]
NEC1_NICLS7.460e-2656.76Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana s... [more]
GL51_ORYSJ1.273e-2554.62Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GLT2_ARATH6.982e-2451.79Germin-like protein subfamily T member 2 OS=Arabid... [more]
GER3_WHEAT3.465e-2352.25Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 S... [more]
GLT1_ARATH4.526e-2350.89Germin-like protein subfamily T member 1 OS=Arabid... [more]
GER2_WHEAT5.911e-2352.25Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 S... [more]
OXO2_HORVU7.720e-2352.25Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1[more]
OXO1_HORVU7.720e-2352.25Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-529 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510014 ID=CF510014; Name=CF510014; organism=Citrus sinensis; type=EST; length=446bp
ACACTACCCAAAAAAAAAATTGATATAAATTAATCAAAATGAAAGCTGTT
CAATTTCTTTCAGGTTTTGCTCTCTTGGCTTTGGCTTCTTTATTGGCCTC
TGCCTATGACCCCAGCCCTCTTCAAGATATCTGTGTCGCCATCAATGATC
CCAAGGATGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTT
GCGAAAGCAGAAGATTTCTTTTTATCAGGGCTAGACAAGCCTGGAAACAC
AGCAAATCGACTTGGCTTTAGTGTGACAAATGCAAATGTTGAGCAAATTC
CAGGACTTAACACTCTTGGCATATCAGCAGTCCGTATTGACTACGCGCCA
TACGGTCAAAATCCACCTCACACTCACCCCCGTGCCACTGAAATCCTGGT
GGTCCTGGAAGGAACTCTTTATGTTGGTTTTGTGACATCGAACCAA
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