CF510014
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL31_ORYSJ (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179000 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 9.141e-16 Identity = 50/117 (42.74%), Postives = 66/117 (56.41%), Query Frame = 3 Query: 108 DPSPLQDICVAINDPKD--GVF-VNGKFCKDPKLAKAEDFFLSGLDKPGNTANRL-GFSVT-NANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN 443 DP L D CVA G F +NG C DP LA+A+ F S L + N A L GF+ T + +PG N G++ RID AP G PPH+HPRA+E +VL G++ VGF ++ Sbjct: 23 DPDLLFDYCVADTAAATAAGAFHLNGLACIDPALARADHFATSALSRATNPAATLYGFNATLTSPAASLPGANAQGLAMARIDLAPGGMAPPHSHPRASEAALVLSGSVLVGFADTS 139
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL24_ORYSJ (Germin-like protein 2-4 OS=Oryza sativa subsp. japonica GN=Os02g0532500 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.194e-15 Identity = 48/115 (41.74%), Postives = 60/115 (52.17%), Query Frame = 3 Query: 108 DPSPLQDICV---AINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDY-APYGQNPPHTHPRATEILVVLEGTLYVGFVTS 440 DP +QD CV P + + C+ P A DF SG+ GN + GF+ + Q PGL+TLG+S R D A G NPPH HPRATE +VL G +Y GFV S Sbjct: 24 DPDAVQDFCVPDAGRGRPVELAMLPAYPCRSPANLTAGDFAFSGVRAAGNFSPETGFAGVSVTPAQFPGLHTLGMSFARADLSAAGGVNPPHYHPRATETALVLAGRVYAGFVDS 138
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL813_ORYSJ (Germin-like protein 8-13 OS=Oryza sativa subsp. japonica GN=Os08g0459700 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.925e-15 Identity = 44/107 (41.12%), Postives = 59/107 (55.14%), Query Frame = 3 Query: 123 QDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN 443 QD CVA N P +G C+ A DF+ L +PG S+ +A V+Q P +N LGISA R+D P G P HTHP +E+L VL+G L GF++S+ Sbjct: 29 QDFCVA-NLPLGADTPSGYQCRPAATVTAADFYSGALARPGILIRPFNTSLASAFVQQYPAVNGLGISASRVDILPGGVVPLHTHPAGSELLYVLDGALVAGFISSS 134
BLAST of CF510014 vs. ExPASy Swiss-Prot
Match: GL814_ORYSJ (Germin-like protein 8-14 OS=Oryza sativa subsp. japonica GN=GER5 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.724e-14 Identity = 50/107 (46.73%), Postives = 61/107 (57.01%), Query Frame = 3 Query: 123 QDICVAINDPKDGVFVNGKFCKDPKLAKAEDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN 443 QD CVA D G CK A DF GL GNT+N + +VT A V Q PG+N LGISA R+D A G P HTHP A+E+L V +GT+ GF+TS+ Sbjct: 26 QDFCVADLTCSDTPA--GYPCKAS--VGAGDFAYHGLAAAGNTSNLIKAAVTPAFVGQFPGVNGLGISAARLDIAVGGVVPLHTHPAASELLFVTQGTVAAGFITSS 128 The following BLAST results are available for this feature:
BLAST of CF510014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >CF510014 ID=CF510014; Name=CF510014; organism=Citrus sinensis; type=EST; length=446bpback to top |