CF510017
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: YPT71_SCHPO (GTP-binding protein ypt71 OS=Schizosaccharomyces pombe GN=ypt71 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 1.706e-44 Identity = 81/114 (71.05%), Postives = 100/114 (87.72%), Query Frame = 1 Query: 106 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSD 447 M +++R LKV+ILGDSGVGKT LMNQ+VN+KFS +YKATIGADFLTK+V +D+L TLQ+WDTAGQERFQSLG+AFYRGADCCV+VY+VN+ KSFD++ NWR+EFL Q S + Sbjct: 1 MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDE 114
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: YPT7_YEAST (GTP-binding protein YPT7 OS=Saccharomyces cerevisiae GN=YPT7 PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 6.482e-44 Identity = 82/117 (70.09%), Postives = 102/117 (87.18%), Query Frame = 1 Query: 106 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFE-DRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPD 453 M SR++ +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV + D++ T+Q+WDTAGQERFQSLGVAFYRGADCCVLVYDV + SF+N+ +WR+EFL+ A+ + P+ Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPE 117
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAB9B_MOUSE (Ras-related protein Rab-9B OS=Mus musculus GN=Rab9b PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 7.942e-34 Identity = 65/115 (56.52%), Postives = 86/115 (74.78%), Query Frame = 1 Query: 112 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 456 S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIWDTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DPD+ Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPDH 116
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAB9B_PONAB (Ras-related protein Rab-9B OS=Pongo abelii GN=RAB9B PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 2.311e-33 Identity = 64/115 (55.65%), Postives = 86/115 (74.78%), Query Frame = 1 Query: 112 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 456 S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIWDTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++ Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEH 116
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAB9B_HUMAN (Ras-related protein Rab-9B OS=Homo sapiens GN=RAB9B PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 2.311e-33 Identity = 64/115 (55.65%), Postives = 86/115 (74.78%), Query Frame = 1 Query: 112 SRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 456 S + LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL ++++ + R TLQIWDTAGQERF+SL FYRGADCC+L + V+ +SF+NL NW++EF+ A DP++ Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEH 116
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAB9A_RAT (Ras-related protein Rab-9A OS=Rattus norvegicus GN=Rab9a PE=2 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 1.268e-31 Identity = 58/113 (51.33%), Postives = 84/113 (74.34%), Query Frame = 1 Query: 118 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 456 + +L K+I+LGD GVGK+SLMN+YV KF +Q TIG +FL K+++ + T+QIWDTAGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++ Sbjct: 4 KSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPES 116
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAB9A_MOUSE (Ras-related protein Rab-9A OS=Mus musculus GN=Rab9a PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.268e-31 Identity = 58/113 (51.33%), Postives = 84/113 (74.34%), Query Frame = 1 Query: 118 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 456 + +L K+I+LGD GVGK+SLMN+YV KF +Q TIG +FL K+++ + T+QIWDTAGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++ Sbjct: 4 KSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPES 116
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAB9A_HUMAN (Ras-related protein Rab-9A OS=Homo sapiens GN=RAB9A PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.268e-31 Identity = 59/113 (52.21%), Postives = 83/113 (73.45%), Query Frame = 1 Query: 118 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 456 + +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDTAGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++ Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPES 116
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAB9A_CANFA (Ras-related protein Rab-9A OS=Canis familiaris GN=RAB9A PE=1 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 1.268e-31 Identity = 59/113 (52.21%), Postives = 83/113 (73.45%), Query Frame = 1 Query: 118 RRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDN 456 + +L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K+++ + T+QIWDTAGQERF+SL FYRG+DCC+L + V+ +SF NL+NW++EF+ A +P++ Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPES 116
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAB7B_BOVIN (Ras-related protein Rab-7b OS=Bos taurus GN=RAB7B PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.040e-25 Identity = 54/114 (47.37%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 106 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSD 447 M R++ LK+II+G GVGKTSL+++YV+K F Y+ T+GA L+K + ED LQIWDT GQERF+S+ FY+G+D CVL +DV ++SF+ L WR + L + P + Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHRYVHKTFYEDYQTTLGASILSKIIILEDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALETWRGDVLAKTIPME 114 The following BLAST results are available for this feature:
BLAST of CF510017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF510017 ID=CF510017; Name=CF510017; organism=Citrus sinensis; type=EST; length=456bpback to top |