CF510017
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAN3_ORYSI (GTP-binding nuclear protein Ran-3 OS=Oryza sativa subsp. indica GN=RAN3 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 8.545e-12 Identity = 29/96 (30.21%), Postives = 53/96 (55.21%), Query Frame = 1 Query: 133 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREE 420 K+I++GD G GKT+ + +++ +F +Y+ TIG + + WDTAGQE+F L +Y C ++++DV S ++ N+ W ++ Sbjct: 19 KLILVGDGGTGKTTFVKRHITGEFEKRYEPTIGVEVRPLDFHTSRGKVRFCCWDTAGQEKFGGLRDGYYIHGHCAIIMFDVTSRLTYKNVPTWHKD 114
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAN2_ORYSJ (GTP-binding nuclear protein Ran-2 OS=Oryza sativa subsp. japonica GN=RAN2 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.116e-11 Identity = 29/96 (30.21%), Postives = 52/96 (54.17%), Query Frame = 1 Query: 133 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREE 420 K++I+GD G GKT+ + +++ +F +Y+ TIG + + WDTAGQE+F L +Y C ++++DV S ++ N+ W + Sbjct: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRD 110
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAN2_ORYSI (GTP-binding nuclear protein Ran-2 OS=Oryza sativa subsp. indica GN=RAN2 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.116e-11 Identity = 29/96 (30.21%), Postives = 52/96 (54.17%), Query Frame = 1 Query: 133 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREE 420 K++I+GD G GKT+ + +++ +F +Y+ TIG + + WDTAGQE+F L +Y C ++++DV S ++ N+ W + Sbjct: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRD 110
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAS2_PHYPO (Ras-like protein 2 OS=Physarum polycephalum GN=RAS-2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.457e-11 Identity = 36/98 (36.73%), Postives = 56/98 (57.14%), Query Frame = 1 Query: 133 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFL 426 K++I+G GVGK++L Q + F ++Y TI D K+V ++ L I DTAGQE + ++ + R V+VY + S SFD +N +RE+ L Sbjct: 7 KLVIVGGGGVGKSALTIQLIQNHFIDEYDPTI-EDSYRKQVVIDEETCLLDILDTAGQEEYSAMRDQYMRTGQGFVMVYSITSRSSFDEINAFREQIL 103
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAN_TETTH (GTP-binding nuclear protein Ran OS=Tetrahymena thermophila PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.457e-11 Identity = 30/96 (31.25%), Postives = 54/96 (56.25%), Query Frame = 1 Query: 133 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREE 420 K++++GD GVGKT+ + ++ +F +Y AT G + + IWDTAGQE+ L +Y GA+ ++++DV S ++ N+ W ++ Sbjct: 13 KLVLVGDGGVGKTTFVTRHQTGEFEKRYIATQGVNVSNMVLYTTKGPIRFNIWDTAGQEKLGGLREGYYIGANAAIMMFDVTSRITYKNIPKWHKD 108
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAN4_ARATH (GTP-binding nuclear protein Ran-4 OS=Arabidopsis thaliana GN=RAN4 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.457e-11 Identity = 27/93 (29.03%), Postives = 53/93 (56.99%), Query Frame = 1 Query: 133 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNW 411 K++I+GD G GKT+ + +++ +F + + T+G D + + WDTAGQE++ L A+Y C ++++DV + ++ N++ W Sbjct: 15 KLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRGKIRFECWDTAGQEKYSGLKDAYYIHGQCAIIMFDVTARHTYMNIDRW 107
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RASC_DICDI (Ras-like protein rasC OS=Dictyostelium discoideum GN=rasC PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.904e-11 Identity = 35/100 (35.00%), Postives = 59/100 (59.00%), Query Frame = 1 Query: 127 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFL 426 LLK++I+GD GVGK++L Q +F +Y TI + K+V ++ ++ L I DTAGQE + ++ + R ++VY + S SF+ + +RE+ L Sbjct: 4 LLKLVIVGDGGVGKSALTIQLTQNQFIAEYDPTIENSY-RKQVNIDEEVYMLDILDTAGQEEYSAMRDQYIRSGRGFLIVYSIISRASFEAVTTFREQIL 102
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAS1_CANAL (Ras-like protein 1 OS=Candida albicans GN=RAS1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.904e-11 Identity = 33/98 (33.67%), Postives = 58/98 (59.18%), Query Frame = 1 Query: 133 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFL 426 K++++G GVGK++L Q + F ++Y TI D K+ +D+ L + DTAGQE + ++ + R + +LVY +NS+ SF LN++ ++ L Sbjct: 6 KLVVVGGGGVGKSALTIQLIQSHFVDEYDPTI-EDSYRKQCTIDDQQVLLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSINSLNSFQELNSFYDQIL 102
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSJ (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica GN=RAN1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.904e-11 Identity = 29/96 (30.21%), Postives = 52/96 (54.17%), Query Frame = 1 Query: 133 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREE 420 K++I+GD G GKT+ + +++ +F +Y+ TIG + + WDTAGQE+F L +Y C ++++DV S ++ N+ W + Sbjct: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRD 110
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSI (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica GN=RAN1 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 1.904e-11 Identity = 29/96 (30.21%), Postives = 52/96 (54.17%), Query Frame = 1 Query: 133 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREE 420 K++I+GD G GKT+ + +++ +F +Y+ TIG + + WDTAGQE+F L +Y C ++++DV S ++ N+ W + Sbjct: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRD 110 The following BLAST results are available for this feature:
BLAST of CF510017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF510017 ID=CF510017; Name=CF510017; organism=Citrus sinensis; type=EST; length=456bpback to top |