CF510017

Overview
NameCF510017
Unique NameCF510017
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length456
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAS1_DROPE (Ras-like protein 1 OS=Drosophila persimilis GN=Ras85D PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.447e-11
Identity = 35/99 (35.35%), Postives = 58/99 (58.59%), Query Frame = 1
Query:  124 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREE 420
            T  K++++G  GVGK++L  Q +   F ++Y  TI  D   K+V  +     L I DTAGQE + ++   + R  +  +LV+ VNS KSF+++  +RE+
Sbjct:    2 TEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQ 99          
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAS1_DROMO (Ras-like protein 1 OS=Drosophila mojavensis GN=Ras85D PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.447e-11
Identity = 35/99 (35.35%), Postives = 58/99 (58.59%), Query Frame = 1
Query:  124 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREE 420
            T  K++++G  GVGK++L  Q +   F ++Y  TI  D   K+V  +     L I DTAGQE + ++   + R  +  +LV+ VNS KSF+++  +RE+
Sbjct:    2 TEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQ 99          
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAS1_DROME (Ras-like protein 1 OS=Drosophila melanogaster GN=Ras85D PE=1 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 9.447e-11
Identity = 35/99 (35.35%), Postives = 58/99 (58.59%), Query Frame = 1
Query:  124 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREE 420
            T  K++++G  GVGK++L  Q +   F ++Y  TI  D   K+V  +     L I DTAGQE + ++   + R  +  +LV+ VNS KSF+++  +RE+
Sbjct:    2 TEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQ 99          
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAS1_DROMA (Ras-like protein 1 OS=Drosophila mauritiana GN=Ras85D PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.447e-11
Identity = 35/99 (35.35%), Postives = 58/99 (58.59%), Query Frame = 1
Query:  124 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREE 420
            T  K++++G  GVGK++L  Q +   F ++Y  TI  D   K+V  +     L I DTAGQE + ++   + R  +  +LV+ VNS KSF+++  +RE+
Sbjct:    2 TEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQ 99          
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAS1_DROGR (Ras-like protein 1 OS=Drosophila grimshawi GN=Ras85D PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.447e-11
Identity = 35/99 (35.35%), Postives = 58/99 (58.59%), Query Frame = 1
Query:  124 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREE 420
            T  K++++G  GVGK++L  Q +   F ++Y  TI  D   K+V  +     L I DTAGQE + ++   + R  +  +LV+ VNS KSF+++  +RE+
Sbjct:    2 TEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQ 99          
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAS1_DROER (Ras-like protein 1 OS=Drosophila erecta GN=Ras85D PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.447e-11
Identity = 35/99 (35.35%), Postives = 58/99 (58.59%), Query Frame = 1
Query:  124 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREE 420
            T  K++++G  GVGK++L  Q +   F ++Y  TI  D   K+V  +     L I DTAGQE + ++   + R  +  +LV+ VNS KSF+++  +RE+
Sbjct:    2 TEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQ 99          
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAS1_DROAN (Ras-like protein 1 OS=Drosophila ananassae GN=Ras85D PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.447e-11
Identity = 35/99 (35.35%), Postives = 58/99 (58.59%), Query Frame = 1
Query:  124 TLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREE 420
            T  K++++G  GVGK++L  Q +   F ++Y  TI  D   K+V  +     L I DTAGQE + ++   + R  +  +LV+ VNS KSF+++  +RE+
Sbjct:    2 TEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQ 99          
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAP2C_MOUSE (Ras-related protein Rap-2c OS=Mus musculus GN=Rap2c PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.447e-11
Identity = 34/98 (34.69%), Postives = 57/98 (58.16%), Query Frame = 1
Query:  133 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFL 426
            KV++LG  GVGK++L  Q+V   F  +Y  TI  DF  KE++ +     L+I DTAG E+F S+   + +     +LVY + + +SF ++   R++ +
Sbjct:    5 KVVVLGSGGVGKSALTVQFVTGTFIEKYDPTI-EDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIV 101          
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAP2C_HUMAN (Ras-related protein Rap-2c OS=Homo sapiens GN=RAP2C PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.447e-11
Identity = 34/98 (34.69%), Postives = 57/98 (58.16%), Query Frame = 1
Query:  133 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFL 426
            KV++LG  GVGK++L  Q+V   F  +Y  TI  DF  KE++ +     L+I DTAG E+F S+   + +     +LVY + + +SF ++   R++ +
Sbjct:    5 KVVVLGSGGVGKSALTVQFVTGTFIEKYDPTI-EDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIV 101          
BLAST of CF510017 vs. ExPASy Swiss-Prot
Match: RAP2C_BOVIN (Ras-related protein Rap-2c OS=Bos taurus GN=RAP2C PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.447e-11
Identity = 34/98 (34.69%), Postives = 57/98 (58.16%), Query Frame = 1
Query:  133 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFL 426
            KV++LG  GVGK++L  Q+V   F  +Y  TI  DF  KE++ +     L+I DTAG E+F S+   + +     +LVY + + +SF ++   R++ +
Sbjct:    5 KVVVLGSGGVGKSALTVQFVTGTFIEKYDPTI-EDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIV 101          
The following BLAST results are available for this feature:
BLAST of CF510017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAS1_DROPE9.447e-1135.35Ras-like protein 1 OS=Drosophila persimilis GN=Ras... [more]
RAS1_DROMO9.447e-1135.35Ras-like protein 1 OS=Drosophila mojavensis GN=Ras... [more]
RAS1_DROME9.447e-1135.35Ras-like protein 1 OS=Drosophila melanogaster GN=R... [more]
RAS1_DROMA9.447e-1135.35Ras-like protein 1 OS=Drosophila mauritiana GN=Ras... [more]
RAS1_DROGR9.447e-1135.35Ras-like protein 1 OS=Drosophila grimshawi GN=Ras8... [more]
RAS1_DROER9.447e-1135.35Ras-like protein 1 OS=Drosophila erecta GN=Ras85D ... [more]
RAS1_DROAN9.447e-1135.35Ras-like protein 1 OS=Drosophila ananassae GN=Ras8... [more]
RAP2C_MOUSE9.447e-1134.69Ras-related protein Rap-2c OS=Mus musculus GN=Rap2... [more]
RAP2C_HUMAN9.447e-1134.69Ras-related protein Rap-2c OS=Homo sapiens GN=RAP2... [more]
RAP2C_BOVIN9.447e-1134.69Ras-related protein Rap-2c OS=Bos taurus GN=RAP2C ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-532 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510017 ID=CF510017; Name=CF510017; organism=Citrus sinensis; type=EST; length=456bp
CGCACGCAGAGCCTCAATAACAACTACGGAGCACGTCAAAACGATCAACT
GATTTGCGTTTGGAGGTAGATCGTTCGATCGATTGACCGATTTTGCCCCA
GAACGATGCCGTCTCGTAGAAGAACTCTCCTCAAGGTCATCATCCTCGGC
GACAGCGGGGTGGGCAAGACCTCTTTGATGAATCAATATGTAAATAAGAA
GTTTAGCAATCAGTACAAGGCGACCATCGGAGCTGATTTCTTGACAAAGG
AAGTGCAGTTTGAAGATAGGCTCTTCACCTTACAGATCTGGGATACAGCT
GGTCAGGAAAGATTCCAAAGCCTGGGTGTTGCTTTCTACCGAGGTGCAGA
TTGCTGTGTACTTGTGTATGATGTAAATTCTATGAAGTCCTTTGACAACC
TCAATAACTGGAGAGAAGAATTCCTCATTCAGGCTAGCCCTTCGGATCCA
GACAAT
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