CF510025

Overview
NameCF510025
Unique NameCF510025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL12_ARATH (Putative germin-like protein subfamily 1 member 2 OS=Arabidopsis thaliana GN=At3g04150 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.558e-57
Identity = 81/130 (62.31%), Postives = 101/130 (77.69%), Query Frame = 2
Query:   59 YDPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            YDP+ LQD CVA     + VFVNGKFCKDPKL TA DFF SGLN PGNT+NRLG + T+ +V +IPGLNTLG++  R+D+AP GQ PPHIHPRAS+I+LVL+G L  GFV+S++ N TL +K+L+ G  F
Sbjct:   25 YDPNPLQDYCVATNGT-NRVFVNGKFCKDPKLVTANDFFYSGLNIPGNTSNRLGASVTDVDVRRIPGLNTLGIAIARLDFAPGGQLPPHIHPRASQIILVLKGQLSVGFVSSNDYNYTLFSKILYPGDVF 153          

HSP 2 Score: 73.9442 bits (180), Expect = 1.558e-57
Identity = 36/63 (57.14%), Postives = 41/63 (65.08%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            K    GDVF FPIGL+ FH N GKT AVA   + SQ PG I I D +FG++P I P  LAKAF
Sbjct:  145 KILYPGDVFAFPIGLVQFHANTGKTHAVAIGVVGSQDPGVIPIGDAVFGSNPLIDPKLLAKAF 207          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL18_ARATH (Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana GN=GLP9 PE=2 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.559e-57
Identity = 78/129 (60.47%), Postives = 94/129 (72.87%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            DPS LQD CV +  P DGVFVNGKFCKDP++  A+DFF S LN+PGNT N +G N T  NV  + GLNTLG+S  RIDYAPNGQ+PPH HPRA+EIL+V +GTL  GF++S+   N L  K L+ G  F
Sbjct:   26 DPSPLQDFCVGVNTPADGVFVNGKFCKDPRIVFADDFFFSSLNRPGNTNNAVGSNVTTVNVNNLGGLNTLGISLVRIDYAPNGQNPPHTHPRATEILVVQQGTLLVGFISSNQDGNRLFAKTLNVGDVF 154          

HSP 2 Score: 73.1738 bits (178), Expect = 1.559e-57
Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = 3
Query:  438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            GDVFVFP GLIHF  N+G T AVA + L+SQ  G ITIA+TIFG+ P + P+ LA+AF
Sbjct:  151 GDVFVFPEGLIHFQFNLGGTPAVAIAALSSQNAGVITIANTIFGSKPDVDPNVLARAF 208          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL13_ARATH (Germin-like protein subfamily 1 member 3 OS=Arabidopsis thaliana GN=At3g04170 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.210e-56
Identity = 82/130 (63.08%), Postives = 98/130 (75.38%), Query Frame = 2
Query:   59 YDPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            YDPS LQD CVA+ + K+GVFVNG+FCKDPKL T++DFF SGLN PGNT  RLG     AN   IPGLNTLGV   RID+AP G  PPHIHPRASEI+LV++G L  GFV+S++ N TL +K+L+ G  F
Sbjct:   25 YDPSPLQDYCVAVPE-KNGVFVNGEFCKDPKLVTSDDFFASGLNIPGNTNKRLGSFVNPAN---IPGLNTLGVGIARIDFAPGGLIPPHIHPRASEIILVIKGKLLVGFVSSNDYNYTLFSKILYPGDVF 150          

HSP 2 Score: 76.2554 bits (186), Expect = 2.210e-56
Identity = 36/63 (57.14%), Postives = 43/63 (68.25%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            K    GDVFV PIGL+ FH NIGKT+AVA   + SQ PG I++ D +FG+ P I P  LAKAF
Sbjct:  142 KILYPGDVFVHPIGLVQFHANIGKTNAVAIGAVGSQNPGYISVGDAVFGSKPPIDPKILAKAF 204          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL111_ARATH (Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.899e-56
Identity = 78/129 (60.47%), Postives = 93/129 (72.09%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            DPS+LQD CV+     +GVFVNGKFCKDPKL TA+DFF SGL      T+ +G   T  NV  + GLNTLG+S  RIDYA NGQ+PPH HPRA+EIL+V +GTL  GFVTS N +N L +KVL+EG  F
Sbjct:   26 DPSQLQDFCVSANTSANGVFVNGKFCKDPKLVTADDFFFSGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRATEILVVEQGTLLVGFVTS-NPDNRLFSKVLNEGDVF 153          

HSP 2 Score: 83.5741 bits (205), Expect = 4.899e-56
Identity = 41/63 (65.08%), Postives = 47/63 (74.60%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            K    GDVFVFP GLIHF  NIGK  AVA++ L+SQ PG ITIA+T+FGA+P I P  LAKAF
Sbjct:  145 KVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIANTVFGANPAINPTILAKAF 207          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL110_ARATH (Germin-like protein subfamily 1 member 10 OS=Arabidopsis thaliana GN=At5g38930 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.947e-55
Identity = 77/129 (59.69%), Postives = 91/129 (70.54%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            DPS+LQD CV+     +GVFVNGKFCKDPKL TA+DFF  GL      T+ +G   T  NV  + GLNTLG+S  RIDYA +GQ+PPH HPRA+EIL+V  GTL  GFVTS N +N L TKVL+EG  F
Sbjct:   26 DPSQLQDFCVSANSSANGVFVNGKFCKDPKLVTADDFFFPGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVDGQNPPHTHPRATEILVVELGTLLVGFVTS-NPDNRLFTKVLNEGDVF 153          

HSP 2 Score: 83.5741 bits (205), Expect = 6.947e-55
Identity = 41/63 (65.08%), Postives = 47/63 (74.60%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            K    GDVFVFP GLIHF  NIGK  AVA++ L+SQ PG ITIA T+FGA+P I P+ LAKAF
Sbjct:  145 KVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIAPTVFGANPAINPNILAKAF 207          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL16_ARATH (Germin-like protein subfamily 1 member 6 OS=Arabidopsis thaliana GN=At3g04200 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 9.055e-55
Identity = 79/130 (60.77%), Postives = 92/130 (70.77%), Query Frame = 2
Query:   59 YDPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            YDP+ LQD CVA  +  + VFVNGKFCKDPK  TA DF  SGLN   NTTN LG N T  +V +IPGLNTLGVS  R+D+A  GQ+PPHIHPRA+EIL+V +G L  GFV+S+  NN L  KVL  G  F
Sbjct:   26 YDPNPLQDFCVAASET-NRVFVNGKFCKDPKSVTANDFSYSGLNIARNTTNFLGSNVTTVDVNKIPGLNTLGVSLARLDFAQGGQNPPHIHPRATEILVVTKGKLLVGFVSSNQDNNRLFYKVLKRGDVF 154          

HSP 2 Score: 80.8777 bits (198), Expect = 9.055e-55
Identity = 38/63 (60.32%), Postives = 47/63 (74.60%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            K   RGDVFVFPIGLIHF +N+ +T AVA++G  SQ PG I IAD +FG++P I  + LAKAF
Sbjct:  146 KVLKRGDVFVFPIGLIHFQMNVRRTRAVAFAGFGSQNPGTIRIADAVFGSNPSIPQEVLAKAF 208          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL112_ARATH (Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 4.445e-54
Identity = 76/130 (58.46%), Postives = 93/130 (71.54%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNT-TNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            DPS LQD C+ +  P + +FVNGKFCKDPKL TA+DF+ SGL+K   T ++ +G N T  NV QIPGLNTLG+S  RIDY  NGQ+PPH HPRA+EILLV EGTL+ GF +S    N L  K L++G  F
Sbjct:   26 DPSPLQDFCIGVNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGFFSSFP-ENRLFNKTLNKGDVF 154          

HSP 2 Score: 78.5666 bits (192), Expect = 4.445e-54
Identity = 38/59 (64.41%), Postives = 46/59 (77.97%), Query Frame = 3
Query:  435 RGDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            +GDVFVFP GLIHF VNIGK  AVA++ L+SQ PG I I +T+FG+ P I P+ LAKAF
Sbjct:  150 KGDVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPGVIIIGNTLFGSKPPIDPNVLAKAF 208          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL15_ARATH (Germin-like protein subfamily 1 member 5 OS=Arabidopsis thaliana GN=At3g04190 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 1.284e-53
Identity = 77/130 (59.23%), Postives = 94/130 (72.31%), Query Frame = 2
Query:   59 YDPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            Y+PS LQD CVA  +  +GV+VNGKFCKDPK  TA DF+ SGLN PGNT+   GV  T  +V+++PGLNTLGV   RID+AP G  PPH HPR SEI LV++G L+ GFV+S+  N TL TKVL+ G  F
Sbjct:   25 YEPSPLQDYCVATNET-NGVYVNGKFCKDPKCVTANDFYTSGLNVPGNTSTGPGVKITVVDVKRMPGLNTLGVDIARIDFAPGGLYPPHTHPRGSEIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVF 153          

HSP 2 Score: 72.4034 bits (176), Expect = 1.284e-53
Identity = 35/58 (60.34%), Postives = 40/58 (68.97%), Query Frame = 3
Query:  438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            GDVFVFP GLI FH NIGKT+AV  +   SQ PG I I + +FG+ P I P  LAKAF
Sbjct:  150 GDVFVFPKGLIQFHANIGKTNAVVIAATGSQNPGRIIIGNAVFGSKPLIDPKVLAKAF 207          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL14_ARATH (Germin-like protein subfamily 1 member 4 OS=Arabidopsis thaliana GN=At3g04180 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.845e-53
Identity = 74/130 (56.92%), Postives = 90/130 (69.23%), Query Frame = 2
Query:   59 YDPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            YDPS LQD CVA  +  +GV+VNG+FCKDPK  T  DF+ SGLN PGNT    G   T  +VE++PGLNTLGV   R D+AP G  PPH HPR S+I LV++G L+ GFV+S+  N TL TKVL+ G  F
Sbjct:   25 YDPSPLQDYCVATNET-NGVYVNGEFCKDPKRVTTNDFYTSGLNVPGNTIIGPGARNTVVDVERLPGLNTLGVDIARYDFAPGGLDPPHTHPRGSQIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVF 153          

HSP 2 Score: 75.8702 bits (185), Expect = 2.845e-53
Identity = 37/58 (63.79%), Postives = 41/58 (70.69%), Query Frame = 3
Query:  438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            GDVFVFP GLIHFH NIG+T+AV  S   SQ PG I I D +FG+ P I P  LAKAF
Sbjct:  150 GDVFVFPKGLIHFHANIGETNAVVISAGGSQDPGRIIIGDAVFGSKPLIDPKVLAKAF 207          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.164e-51
Identity = 80/129 (62.02%), Postives = 91/129 (70.54%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            DPS+LQD CVA  D    V VNG  CKDP   T EDFF SGL+  GNT+NR G   T  NV QI GLNTLG+S  R+DYAP G +PPHIHPRA+EIL +LEG+LY GFVTS N  N L TKVL++G  F
Sbjct:   23 DPSQLQDFCVA--DKMSQVLVNGFACKDPAAITVEDFFFSGLHMAGNTSNRQGSAVTGVNVAQISGLNTLGISLARVDYAPYGLNPPHIHPRATEILTILEGSLYVGFVTS-NPENKLFTKVLNKGDVF 148          

HSP 2 Score: 71.2478 bits (173), Expect = 1.164e-51
Identity = 35/63 (55.56%), Postives = 42/63 (66.67%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            K   +GDVFVFP GLIHF  N G    +A + L+SQ PG ITIA+ +FG+ P I  D LAKAF
Sbjct:  140 KVLNKGDVFVFPQGLIHFQFNYGTKDVIALAALSSQNPGVITIANAVFGSKPFISDDILAKAF 202          
The following BLAST results are available for this feature:
BLAST of CF510025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL12_ARATH1.558e-5762.31Putative germin-like protein subfamily 1 member 2 ... [more]
GL18_ARATH1.559e-5760.47Germin-like protein subfamily 1 member 8 OS=Arabid... [more]
GL13_ARATH2.210e-5663.08Germin-like protein subfamily 1 member 3 OS=Arabid... [more]
GL111_ARATH4.899e-5660.47Germin-like protein subfamily 1 member 11 OS=Arabi... [more]
GL110_ARATH6.947e-5559.69Germin-like protein subfamily 1 member 10 OS=Arabi... [more]
GL16_ARATH9.055e-5560.77Germin-like protein subfamily 1 member 6 OS=Arabid... [more]
GL112_ARATH4.445e-5458.46Putative germin-like protein subfamily 1 member 12... [more]
GL15_ARATH1.284e-5359.23Germin-like protein subfamily 1 member 5 OS=Arabid... [more]
GL14_ARATH2.845e-5356.92Germin-like protein subfamily 1 member 4 OS=Arabid... [more]
GL21_ORYSJ1.164e-5162.02Putative germin-like protein 2-1 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-540 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_C01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510025 ID=CF510025; Name=CF510025; organism=Citrus sinensis; type=EST; length=613bp
AATTCAATTTCTTCTAGGTTTTGCTCTCTTGGCTTTGGCTTCTTCTTTGG
CCTCTGCCTATGACCCTAGCCGTCTTCAAGATATCTGTGTAGCCATCGAG
GACCCGAAGGATGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAA
GCTTGCGACAGCTGAAGATTTCTTCTTGTCAGGGCTAAACAAGCCTGGAA
ACACAACAAATCGACTTGGTGTTAATGAAACAGAAGCAAATGTTGAGCAA
ATTCCAGGACTCAACACCCTTGGCGTATCAGCATTCCGTATTGACTATGC
GCCGAATGGGCAAAGCCCGCCTCACATTCACCCCCGTGCCAGTGAAATCC
TGCTGGTCCTGGAAGGAACTCTTTATGCTGGTTTTGTGACATCAGACAAC
CTAAATAACACACTCATCACAAAAGTTCTGCATGAGGGGAGATGTTTTTG
TGTTTCCAATTGGTTTGATTCACTTCCACGTCAACATTGGAAAAACAAGT
GCAGTTGCCTATTCTGGTCTAAACAGCCAGTTCCCCGGTGAAATTACCAT
AGCCGACACGATCTTTGGAGCCCATCCTCGAATCAAACCCGATTTTCTTG
CCAAGGCATTCCA
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