CF510025

Overview
NameCF510025
Unique NameCF510025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL23_ORYSJ (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 7.441e-51
Identity = 78/129 (60.47%), Postives = 91/129 (70.54%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            DPS LQD+CVA  D    V VNG  CKD +   AEDFF SGL+  GNTTN+ G   T  NV Q+PGLNTLG+S  RIDYA +G +PPH HPRA+EIL VLEG+LY GFVTS N  N L TKV+++G  F
Sbjct:   30 DPSHLQDLCVA--DKASTVRVNGVACKDGEDVAAEDFFFSGLHMAGNTTNKQGSAVTAVNVAQVPGLNTLGISLARIDYALHGLNPPHTHPRATEILTVLEGSLYVGFVTS-NPENKLFTKVINKGDVF 155          

HSP 2 Score: 73.9442 bits (180), Expect = 7.441e-51
Identity = 36/63 (57.14%), Postives = 43/63 (68.25%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            K   +GDVFVFP GL+HF  N G T AVA   L+SQ PG IT+A+ +FG+ P I  D LAKAF
Sbjct:  147 KVINKGDVFVFPKGLVHFQFNYGTTDAVAIVALSSQNPGVITVANAVFGSKPSITDDILAKAF 209          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL22_ORYSJ (Putative germin-like protein 2-2 OS=Oryza sativa subsp. japonica GN=Os02g0491700 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.054e-49
Identity = 79/129 (61.24%), Postives = 87/129 (67.44%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            DP  LQD CV   D    V VNG  CKD K   A DFF SGL+  GNTTN+ G N T  NV QIPGLNT+GVS  RIDYAPNG +PPH HPRA+EI  VLEG+LY GFV S N  N L TKVL++G  F
Sbjct:   30 DPGLLQDFCVV--DKMSQVRVNGFPCKDAKDVVAGDFFFSGLHMAGNTTNKQGSNVTTVNVAQIPGLNTMGVSLVRIDYAPNGLNPPHTHPRATEIPTVLEGSLYVGFVIS-NPENKLFTKVLNKGDVF 155          

HSP 2 Score: 71.633 bits (174), Expect = 1.054e-49
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            K   +GDVFVFP GL+HF  N G  +AVA + L+SQ PG IT+ + +FG+ P I  D LAKAF
Sbjct:  147 KVLNKGDVFVFPQGLVHFQFNNGTNNAVALAALSSQNPGVITVGNAVFGSKPSISDDILAKAF 209          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GLP1_MESCR (Germin-like protein OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.300e-48
Identity = 70/131 (53.44%), Postives = 88/131 (67.18%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSD--NLNNTLITKVLHEGRCF 448
            DP++LQD CV +  P DG+FVNG FCKDP     +DF   GLN P NT N LG   T      +PGLNTLG+S  R+D+AP+G +PPH HPRA+E+ +VLEGT Y GFVTS+  +  N L  KVL++G  F
Sbjct:   24 DPTQLQDFCVGVNKPNDGLFVNGLFCKDPMEVNPDDFLFRGLNMPANTDNALGFAATLVTAANLPGLNTLGISVARLDFAPHGLNPPHTHPRATEVFVVLEGTFYVGFVTSNLADGGNKLFAKVLNKGDVF 154          

HSP 2 Score: 62.003 bits (149), Expect = 3.300e-48
Identity = 30/49 (61.22%), Postives = 35/49 (71.43%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFG 569
            K   +GDVFVFP GLIHF +NIG    V  SGL+SQ PG ITIA+ +FG
Sbjct:  146 KVLNKGDVFVFPQGLIHFQLNIGNYPGVGISGLSSQNPGVITIANAVFG 194          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL41_ORYSJ (Germin-like protein 4-1 OS=Oryza sativa subsp. japonica GN=Os04g0617900 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 7.297e-48
Identity = 76/132 (57.58%), Postives = 87/132 (65.91%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFL-SGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNL--NNTLITKVLHEGRCF 448
            DPS+LQD CVA  D    VFVNG  CK+PK  TA DFFL   L  PGNT N  G   T   V ++PGLNTLG+S  RID+APNGQ+PPH HPRA+EIL VL+GTL  GFVTS+     N   TK+L  G  F
Sbjct:   29 DPSQLQDFCVA--DKLSAVFVNGFVCKNPKQVTANDFFLPKALGVPGNTVNAQGSAVTPVTVNELPGLNTLGISFARIDFAPNGQNPPHTHPRATEILTVLQGTLLVGFVTSNQPGGGNLQFTKLLGPGDVF 158          

HSP 2 Score: 70.8626 bits (172), Expect = 7.297e-48
Identity = 36/58 (62.07%), Postives = 42/58 (72.41%), Query Frame = 3
Query:  438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            GDVFVFP GLIHF +N G   AVA + L+SQ PG ITIA+ +FG+ P I  D LAKAF
Sbjct:  155 GDVFVFPQGLIHFQLNNGAVPAVAIAALSSQNPGVITIANAVFGSTPPILDDVLAKAF 212          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL89_ORYSJ (Germin-like protein 8-9 OS=Oryza sativa subsp. japonica GN=Os08g0189850 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 7.310e-48
Identity = 78/129 (60.47%), Postives = 90/129 (69.77%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            DPS LQD CVA  D    V VNG  C DPK  TA+ FF + +      TN++G N T  NV QIPGLNTLG+S  RIDYAP GQ+PPH HPRA+EIL VLEGTL+ GFVTS N NNTL +KVL++G  F
Sbjct:   24 DPSPLQDFCVA--DKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLHVGFVTS-NPNNTLFSKVLNKGDVF 149          

HSP 2 Score: 65.855 bits (159), Expect = 7.310e-48
Identity = 35/64 (54.69%), Postives = 43/64 (67.19%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTS-AVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            K   +GDVFVFP+GLIHF  N      AVA + L+SQ PG ITIA+ +FG+ P I  + LAKAF
Sbjct:  141 KVLNKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNPGVITIANAVFGSKPPISDEVLAKAF 204          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL86_ORYSJ (Germin-like protein 8-6 OS=Oryza sativa subsp. japonica GN=Os08g0189500 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.242e-47
Identity = 78/129 (60.47%), Postives = 88/129 (68.22%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            DPS LQD CVA  D    V VNG  C DPK   A+ FF + +      TN++G N T  NV QIPGLNTLG+S  RIDYAP GQ+PPH HPRA+EIL VLEGTLY GFVTS N NNTL +KVL +G  F
Sbjct:   25 DPSPLQDFCVA--DEHSPVLVNGFACLDPKHVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTS-NPNNTLFSKVLKKGDVF 150          

HSP 2 Score: 66.6254 bits (161), Expect = 1.242e-47
Identity = 35/64 (54.69%), Postives = 43/64 (67.19%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTS-AVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            K   +GDVFVFP+GLIHF  N      AVA + L+SQ PG ITIA+ +FG+ P I  + LAKAF
Sbjct:  142 KVLKKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDEVLAKAF 205          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL87_ORYSJ (Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.619e-47
Identity = 77/129 (59.69%), Postives = 89/129 (68.99%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            DPS LQD CVA  D    V VNG  C DPK   A+ FF + +      TN++G N T  NV QIPGLNTLG+S  RIDYAP G++PPH HPRA+EIL VLEGTLY GFVTS N NNTL +KVL++G  F
Sbjct:   25 DPSPLQDFCVA--DKHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTS-NPNNTLFSKVLNKGDVF 150          

HSP 2 Score: 65.855 bits (159), Expect = 1.619e-47
Identity = 36/64 (56.25%), Postives = 42/64 (65.62%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTS-AVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            K   +GDVFVFP GLIHF  N      AVA + L+SQ PG ITIA+ +FG+ P I  D LAKAF
Sbjct:  142 KVLNKGDVFVFPEGLIHFQFNPNPHQPAVALAALSSQNPGAITIANAVFGSKPPISDDILAKAF 205          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL88_ORYSJ (Germin-like protein 8-8 OS=Oryza sativa subsp. japonica GN=Os08g0189700 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.583e-47
Identity = 78/129 (60.47%), Postives = 90/129 (69.77%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            DPS LQD CVA  D    V VNG  C DPK  TA+ FF + +      TN++G N T  NV QIPGLNTLG+S  RIDYAP G++PPH HPRA+EIL VLEGTLY GFVTS N NNTL +KVL++G  F
Sbjct:   24 DPSPLQDFCVA--DKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTS-NPNNTLFSKVLNKGDVF 149          

HSP 2 Score: 62.7734 bits (151), Expect = 3.583e-47
Identity = 35/64 (54.69%), Postives = 41/64 (64.06%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTS-AVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            K   +GDVFVFP GLIHF  N      AVA + L+SQ PG ITIA+ +FG+ P I    LAKAF
Sbjct:  141 KVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDKVLAKAF 204          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL810_ORYSJ (Germin-like protein 8-10 OS=Oryza sativa subsp. japonica GN=GLP2 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 2.983e-46
Identity = 77/129 (59.69%), Postives = 89/129 (68.99%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            DPS LQD CVA  D    V VNG  C DPK   A+ FF + +      TN++G N T  NV QIPGLNTLG+S  RIDYAP G++PPH HPRA+EIL VLEGTLY GFVTS N NNTL +KVL++G  F
Sbjct:   24 DPSPLQDFCVA--DMHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTS-NPNNTLFSKVLNKGDVF 149          

HSP 2 Score: 62.003 bits (149), Expect = 2.983e-46
Identity = 35/64 (54.69%), Postives = 41/64 (64.06%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTS-AVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            K   +GDVFVFP GLIHF  N      AVA + L+SQ PG ITIA+ +FG+ P I    LAKAF
Sbjct:  141 KVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDIVLAKAF 204          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL812_ORYSJ (Germin-like protein 8-12 OS=Oryza sativa subsp. japonica GN=Os08g0231400 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 8.606e-46
Identity = 79/148 (53.38%), Postives = 94/148 (63.51%), Query Frame = 2
Query:    8 FLLGFXXXXXXXXXXXXYDPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSG-LNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            FLLG             YDPS LQD CVA  D    V VNG  CK+P   ++EDFF +   + P NT N+LG N T  NV + PGLNTLG+S  RIDYAP G +PPHIHPRA+E+L VLEGTLY GFVTS+   N L +KV+ +G  F
Sbjct:    7 FLLGALLVLASWQAIVAYDPSPLQDFCVA--DMNSPVRVNGFACKNPMDVSSEDFFNAAKFDMPRNTFNKLGSNVTNLNVMEFPGLNTLGISLARIDYAPMGVNPPHIHPRATELLTVLEGTLYVGFVTSN--PNKLFSKVVCKGDVF 150          

HSP 2 Score: 64.6994 bits (156), Expect = 8.606e-46
Identity = 34/64 (53.12%), Postives = 41/64 (64.06%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTS-AVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            K   +GDVFVFP  +IHF +N+     AVA S L+SQ PG ITIA  +FG+ P I  D L KAF
Sbjct:  142 KVVCKGDVFVFPKAMIHFQMNLDHDKPAVAQSALSSQNPGVITIASAVFGSQPPISDDVLTKAF 205          
The following BLAST results are available for this feature:
BLAST of CF510025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL23_ORYSJ7.441e-5160.47Putative germin-like protein 2-3 OS=Oryza sativa s... [more]
GL22_ORYSJ1.054e-4961.24Putative germin-like protein 2-2 OS=Oryza sativa s... [more]
GLP1_MESCR3.300e-4853.44Germin-like protein OS=Mesembryanthemum crystallin... [more]
GL41_ORYSJ7.297e-4857.58Germin-like protein 4-1 OS=Oryza sativa subsp. jap... [more]
GL89_ORYSJ7.310e-4860.47Germin-like protein 8-9 OS=Oryza sativa subsp. jap... [more]
GL86_ORYSJ1.242e-4760.47Germin-like protein 8-6 OS=Oryza sativa subsp. jap... [more]
GL87_ORYSJ1.619e-4759.69Germin-like protein 8-7 OS=Oryza sativa subsp. jap... [more]
GL88_ORYSJ3.583e-4760.47Germin-like protein 8-8 OS=Oryza sativa subsp. jap... [more]
GL810_ORYSJ2.983e-4659.69Germin-like protein 8-10 OS=Oryza sativa subsp. ja... [more]
GL812_ORYSJ8.606e-4653.38Germin-like protein 8-12 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-540 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_C01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510025 ID=CF510025; Name=CF510025; organism=Citrus sinensis; type=EST; length=613bp
AATTCAATTTCTTCTAGGTTTTGCTCTCTTGGCTTTGGCTTCTTCTTTGG
CCTCTGCCTATGACCCTAGCCGTCTTCAAGATATCTGTGTAGCCATCGAG
GACCCGAAGGATGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAA
GCTTGCGACAGCTGAAGATTTCTTCTTGTCAGGGCTAAACAAGCCTGGAA
ACACAACAAATCGACTTGGTGTTAATGAAACAGAAGCAAATGTTGAGCAA
ATTCCAGGACTCAACACCCTTGGCGTATCAGCATTCCGTATTGACTATGC
GCCGAATGGGCAAAGCCCGCCTCACATTCACCCCCGTGCCAGTGAAATCC
TGCTGGTCCTGGAAGGAACTCTTTATGCTGGTTTTGTGACATCAGACAAC
CTAAATAACACACTCATCACAAAAGTTCTGCATGAGGGGAGATGTTTTTG
TGTTTCCAATTGGTTTGATTCACTTCCACGTCAACATTGGAAAAACAAGT
GCAGTTGCCTATTCTGGTCTAAACAGCCAGTTCCCCGGTGAAATTACCAT
AGCCGACACGATCTTTGGAGCCCATCCTCGAATCAAACCCGATTTTCTTG
CCAAGGCATTCCA
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