CF510025

Overview
NameCF510025
Unique NameCF510025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL811_ORYSJ (Germin-like protein 8-11 OS=Oryza sativa subsp. japonica GN=Os08g0190100 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.122e-45
Identity = 74/129 (57.36%), Postives = 87/129 (67.44%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            DPS LQD CVA  D    V VNG  C +PK   A+ FF + +      TN++G N T  NV QIPGLNTLG+S  RIDYAP GQ+PPH HPRA+EIL VLEGTLY GFVTS N +N   +KVL++G  F
Sbjct:   24 DPSPLQDFCVA--DMHSPVLVNGFACLNPKDVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTS-NPDNKFFSKVLNKGDVF 149          

HSP 2 Score: 67.781 bits (164), Expect = 1.122e-45
Identity = 36/64 (56.25%), Postives = 43/64 (67.19%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTS-AVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            K   +GDVFVFP+GLIHF  N      AVA + L+SQ PG ITIA+ +FG+ P I  D LAKAF
Sbjct:  141 KVLNKGDVFVFPVGLIHFQFNPNPYKPAVAIAALSSQNPGAITIANAVFGSKPPISDDVLAKAF 204          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL82_ORYSJ (Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.122e-45
Identity = 75/130 (57.69%), Postives = 94/130 (72.31%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSG-LNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            DPS LQD CVA  D    V VNG  CK+P  A+A+DFF +  L+KP +T N++G N T  NV Q+PGLNTLG+S  R+D+AP G +PPH HPRA+EI  VLEGTLY GFVTS N +N L++KVL++G  F
Sbjct:   26 DPSPLQDFCVA--DLNSPVRVNGFVCKNPMNASADDFFKAAMLDKPRDTNNKVGSNVTLVNVLQLPGLNTLGISIARLDFAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTS-NPDNRLLSKVLNKGDVF 152          

HSP 2 Score: 64.3142 bits (155), Expect = 1.122e-45
Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTS-AVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            K   +GDVFVFP GLIHF  N      AVA + L+SQ PG ITIA+ +FG++P I  D L KAF
Sbjct:  144 KVLNKGDVFVFPEGLIHFQFNPNPHKPAVAIAALSSQNPGVITIANAVFGSNPPISDDILMKAF 207          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL83_ORYSJ (Germin-like protein 8-3 OS=Oryza sativa subsp. japonica GN=GER2 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 5.495e-45
Identity = 73/131 (55.73%), Postives = 90/131 (68.70%), Query Frame = 2
Query:   59 YDPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSG-LNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            +DPS LQD CVA  D    V VNG  CK+P   T++DFF +   + P NT N++G N T  NV   PGLNTLG+S  RIDYAP G +PPH+HPRA+E+L VLEGTLY GFVTS+   N L +KV+H+G  F
Sbjct:   24 FDPSPLQDFCVA--DMASPVRVNGFPCKNPMNVTSDDFFNAAKFDMPRNTMNKVGSNVTNLNVINFPGLNTLGISLARIDYAPMGVNPPHVHPRATELLTVLEGTLYVGFVTSN--PNRLFSKVVHKGDVF 150          

HSP 2 Score: 64.3142 bits (155), Expect = 5.495e-45
Identity = 35/64 (54.69%), Postives = 41/64 (64.06%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTS-AVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            K   +GDVFVFP  +IHF +N+     AVA S L+SQ PG ITIA  IFG+ P I  D L KAF
Sbjct:  142 KVVHKGDVFVFPKAMIHFQMNLDHNKPAVAQSALSSQNPGVITIASAIFGSTPPISDDVLVKAF 205          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL85_ORYSJ (Germin-like protein 8-5 OS=Oryza sativa subsp. japonica GN=Os08g0189400 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 7.161e-45
Identity = 76/129 (58.91%), Postives = 87/129 (67.44%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            DPS LQD CVA  D    V VNG  C +P    A+ FF +        TN++G N T  NV QIPGLNTLG+S  RIDYAP GQ+PPH HPRA+EIL VLEGTLY GFVTS N NNTL +KVL++G  F
Sbjct:   24 DPSPLQDFCVA--DMHSPVRVNGFACLNPMEVNADHFFKAAKLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTS-NPNNTLFSKVLNKGDVF 149          

HSP 2 Score: 63.929 bits (154), Expect = 7.161e-45
Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTS-AVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            K   +GDVFVFP GLIHF  N      AVA + L+SQ PG ITIA+ +FG+ P I  + LAKAF
Sbjct:  141 KVLNKGDVFVFPQGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDEVLAKAF 204          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL121_ORYSJ (Germin-like protein 12-1 OS=Oryza sativa subsp. japonica GN=Os12g0154700 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 9.329e-45
Identity = 76/134 (56.72%), Postives = 91/134 (67.91%), Query Frame = 2
Query:   59 YDPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFL-SGLNKPGNTT-NRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLN--NTLITKVLHEGRCF 448
            +DPS LQD CVA  D    V VNG  CKD K    +DFFL + L+KP +TT ++ G N T  NV ++ GLNTLG+S  RIDYAP GQ+PPH HPRA+EIL V EGTLY GFVTS+  N  N L TK L++G  F
Sbjct:   23 FDPSPLQDFCVA--DRNSPVRVNGFPCKDAKDVNVDDFFLEANLDKPMDTTKSKAGSNVTLINVMKLTGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVFEGTLYVGFVTSNQANGENKLFTKTLNKGDVF 154          

HSP 2 Score: 65.855 bits (159), Expect = 9.329e-45
Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = 3
Query:  435 RGDVFVFPIGLIHFHVNIGKTS-AVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            +GDVFVFP GLIHF  N      AVA + L+SQ PG ITIA+ +FG++P I  D LAKAF
Sbjct:  150 KGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSNPPISDDVLAKAF 209          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL124_ORYSJ (Putative germin-like protein 12-4 OS=Oryza sativa subsp. japonica GN=Os12g0155000 PE=3 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 9.329e-45
Identity = 75/133 (56.39%), Postives = 91/133 (68.42%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSG-LNKPGNTT-NRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLN--NTLITKVLHEGRCF 448
            DPS LQD CVA  D    V VNG  CKD K  + +DFFL+  L+KP +TT ++ G N T  NV ++ GLNTL +S  RIDYAP GQ+PPH HPRA+EIL VLEG+LY GFVTS+  N  N L TK L++G  F
Sbjct:   24 DPSPLQDFCVA--DKHSPVRVNGLPCKDAKDVSVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLSISMARIDYAPKGQNPPHTHPRATEILTVLEGSLYVGFVTSNQANRENKLFTKTLNKGDVF 154          

HSP 2 Score: 68.5514 bits (166), Expect = 9.329e-45
Identity = 36/60 (60.00%), Postives = 42/60 (70.00%), Query Frame = 3
Query:  435 RGDVFVFPIGLIHFHVNIGKTS-AVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            +GDVFVFP GLIHF  N      AVA + L+SQ PG ITIA+ +FG+HP I  D LAKAF
Sbjct:  150 KGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSHPPISDDVLAKAF 209          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL84_ORYSJ (Germin-like protein 8-4 OS=Oryza sativa subsp. japonica GN=GER1 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.216e-44
Identity = 73/131 (55.73%), Postives = 90/131 (68.70%), Query Frame = 2
Query:   59 YDPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSG-LNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            +DPS LQD CVA  D K  V VNG  CK+P    ++DFF +   + P +T N++G N T  NV   PGLNTLG+S  RIDYAP G +PPHIHPRA+E+L VLEGTLY GFVTS+   N L +KV+H+G  F
Sbjct:   24 FDPSPLQDFCVA--DMKSPVRVNGFPCKNPMEVNSDDFFNAAKFDMPRSTMNKVGSNVTNLNVLNFPGLNTLGISLARIDYAPLGVNPPHIHPRATELLTVLEGTLYVGFVTSN--PNRLFSKVVHKGDTF 150          

HSP 2 Score: 64.6994 bits (156), Expect = 1.216e-44
Identity = 34/64 (53.12%), Postives = 40/64 (62.50%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTS-AVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            K   +GD FVFP  +IHF +N+     AVA S LNSQ PG ITIA  +FG+ P I  D L KAF
Sbjct:  142 KVVHKGDTFVFPKAMIHFQMNLDHNKPAVAQSSLNSQNPGVITIASAVFGSKPPISDDVLTKAF 205          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL122_ORYSJ (Germin-like protein 12-2 OS=Oryza sativa subsp. japonica GN=Os12g0154800 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.506e-44
Identity = 77/133 (57.89%), Postives = 91/133 (68.42%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSG-LNKPGNTT-NRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLN--NTLITKVLHEGRCF 448
            DPS LQD CVA  D    V VNG  CKD K    +DFFL+  L+KP +TT ++ G N T  NV ++ GLNTLG+S  RIDYAP GQ+PPH HPRA+EIL VLEGTLY GFVTS+  N  N L TK L++G  F
Sbjct:   24 DPSPLQDFCVA--DRNSPVHVNGFPCKDAKDVNVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVLEGTLYVGFVTSNQANGENKLFTKTLNKGDVF 154          

HSP 2 Score: 62.7734 bits (151), Expect = 3.506e-44
Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 3
Query:  435 RGDVFVFPIGLIHFHVNIGKTS-AVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            +GDVFVFP GLIHF  N      AVA + L+SQ PG ITIA+ +FG++  I  D LAKAF
Sbjct:  150 KGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSNSPISDDVLAKAF 209          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL32_ORYSJ (Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica GN=Os03g0651800 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 4.572e-44
Identity = 68/130 (52.31%), Postives = 85/130 (65.38%), Query Frame = 2
Query:   62 DPSRLQDICVA-IEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            DP  LQD+CVA  +  +  + +NG  CK  +  TA DFF  GL   GNTTN +G   T A+VE++PGLNT+GVS  RIDYAP G SPPH HPRA+EI+ V EGTL  GFVT+    N L T+ + +G  F
Sbjct:   24 DPDMLQDVCVADYKSLRGPLRLNGIPCKRLENVTANDFFFDGLTNAGNTTNAVGSLVTAASVERLPGLNTMGVSMARIDYAPWGLSPPHTHPRATEIMFVAEGTLDVGFVTT---ANKLFTRTVSKGEVF 150          

HSP 2 Score: 72.0182 bits (175), Expect = 4.572e-44
Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 3
Query:  435 RGDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            +G+VFVFP GL+HF  N G TSA+A +  NSQ PG  +IADT+FGA P +  D LA+AF
Sbjct:  146 KGEVFVFPRGLVHFQRNSGNTSALAIAAFNSQLPGTQSIADTLFGAAPPLPSDTLARAF 204          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL81_ORYSJ (Putative germin-like protein 8-1 OS=Oryza sativa subsp. japonica GN=Os08g0188900 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.319e-43
Identity = 74/131 (56.49%), Postives = 92/131 (70.23%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSG-LNKPGNTT-NRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            +PS LQD CVA  D    V VNG  CK+P   +A+DFF +  L+KP +T  N++G N T  NV +IPGLNTLG+S  R+DYAP G +PPH HPRA+EI  VLEGTLY GFVTS N +N L +KVL++G  F
Sbjct:   25 EPSPLQDFCVA--DLNSAVRVNGFACKNPTNVSADDFFKAAMLDKPRDTAVNKVGSNITLINVMEIPGLNTLGISIVRVDYAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTS-NPDNKLFSKVLNKGDVF 152          

HSP 2 Score: 63.929 bits (154), Expect = 1.319e-43
Identity = 34/64 (53.12%), Postives = 43/64 (67.19%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTS-AVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            K   +GDVFVFP GLIHF  N+     A+A S ++SQ PG ITIA+ +F ++P I  D LAKAF
Sbjct:  144 KVLNKGDVFVFPKGLIHFQFNLDPHKPAIATSAISSQNPGIITIANAVFRSNPPISDDILAKAF 207          
The following BLAST results are available for this feature:
BLAST of CF510025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL811_ORYSJ1.122e-4557.36Germin-like protein 8-11 OS=Oryza sativa subsp. ja... [more]
GL82_ORYSJ1.122e-4557.69Germin-like protein 8-2 OS=Oryza sativa subsp. jap... [more]
GL83_ORYSJ5.495e-4555.73Germin-like protein 8-3 OS=Oryza sativa subsp. jap... [more]
GL85_ORYSJ7.161e-4558.91Germin-like protein 8-5 OS=Oryza sativa subsp. jap... [more]
GL121_ORYSJ9.329e-4556.72Germin-like protein 12-1 OS=Oryza sativa subsp. ja... [more]
GL124_ORYSJ9.329e-4556.39Putative germin-like protein 12-4 OS=Oryza sativa ... [more]
GL84_ORYSJ1.216e-4455.73Germin-like protein 8-4 OS=Oryza sativa subsp. jap... [more]
GL122_ORYSJ3.506e-4457.89Germin-like protein 12-2 OS=Oryza sativa subsp. ja... [more]
GL32_ORYSJ4.572e-4452.31Putative germin-like protein 3-2 OS=Oryza sativa s... [more]
GL81_ORYSJ1.319e-4356.49Putative germin-like protein 8-1 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-540 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_C01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510025 ID=CF510025; Name=CF510025; organism=Citrus sinensis; type=EST; length=613bp
AATTCAATTTCTTCTAGGTTTTGCTCTCTTGGCTTTGGCTTCTTCTTTGG
CCTCTGCCTATGACCCTAGCCGTCTTCAAGATATCTGTGTAGCCATCGAG
GACCCGAAGGATGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAA
GCTTGCGACAGCTGAAGATTTCTTCTTGTCAGGGCTAAACAAGCCTGGAA
ACACAACAAATCGACTTGGTGTTAATGAAACAGAAGCAAATGTTGAGCAA
ATTCCAGGACTCAACACCCTTGGCGTATCAGCATTCCGTATTGACTATGC
GCCGAATGGGCAAAGCCCGCCTCACATTCACCCCCGTGCCAGTGAAATCC
TGCTGGTCCTGGAAGGAACTCTTTATGCTGGTTTTGTGACATCAGACAAC
CTAAATAACACACTCATCACAAAAGTTCTGCATGAGGGGAGATGTTTTTG
TGTTTCCAATTGGTTTGATTCACTTCCACGTCAACATTGGAAAAACAAGT
GCAGTTGCCTATTCTGGTCTAAACAGCCAGTTCCCCGGTGAAATTACCAT
AGCCGACACGATCTTTGGAGCCCATCCTCGAATCAAACCCGATTTTCTTG
CCAAGGCATTCCA
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