CF510025

Overview
NameCF510025
Unique NameCF510025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.963e-38
Identity = 71/129 (55.04%), Postives = 84/129 (65.12%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            DP  LQD+CVA  D   G+ +NG  CKD    T+ DFF  GL KPG T N  G   T ANV  IPGLNTLGVS  RIDYAP G +PPH HPRA+E++ VLEGTL  GF+T+    N LI++ L +G  F
Sbjct:   24 DPDMLQDLCVA--DLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFLTT---ANKLISQSLKKGDVF 147          

HSP 2 Score: 47.7506 bits (112), Expect = 1.963e-38
Identity = 21/45 (46.67%), Postives = 27/45 (60.00%), Query Frame = 3
Query:  435 RGDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFG 569
            +GDVF FP GL+HF  N G   A   +  NSQ PG  ++  T+FG
Sbjct:  143 KGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLFG 187          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL14_ORYSJ (Germin-like protein 1-4 OS=Oryza sativa subsp. japonica GN=Os01g0952100 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.348e-36
Identity = 70/135 (51.85%), Postives = 84/135 (62.22%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVF-VNGKFCKDPKLATAEDFFLSGLNKPGN--TTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAP-NGQSPPHIHPRASEILLVLEGTLYAGFV--TSDNLNNTLITKVLHEGRCF 448
            DP  LQDICVA      G   VNG  CK     TAEDFF  GL KP +  + N +G   T A VE+IPGLNTLGVS  R+DYAP  G +PPH HPRA+EIL V +G L  GFV  T+   ++ LIT+V+ +G  F
Sbjct:   29 DPDMLQDICVADYKSLQGPLRVNGFPCKPEANVTAEDFFFPGLGKPADVYSGNPMGSAVTAATVERIPGLNTLGVSMARVDYAPWGGANPPHSHPRATEILFVADGLLEVGFVVATAAPASSRLITRVVPKGGVF 163          

HSP 2 Score: 57.3806 bits (137), Expect = 1.348e-36
Identity = 28/60 (46.67%), Postives = 39/60 (65.00%), Query Frame = 3
Query:  435 RGDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFG-AHPRIKPDFLAKAF 611
            +G VFVFP GL+H+  ++G+  AVA S  +SQ PG    AD +FG + P +  D LA+AF
Sbjct:  159 KGGVFVFPRGLLHYERSVGEKPAVAISAFDSQLPGTQAAADALFGSSSPAVPTDVLARAF 218          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GLT1_ARATH (Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana GN=GLP1 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 7.121e-35
Identity = 60/131 (45.80%), Postives = 81/131 (61.83%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCFCV 454
            D   LQD CV   D K    +NG  CK     +A DFF SGL  P +T+N  GV    ANV   PGLNTLG+S   ++ AP G +PPH+HPRA+E+  V+EG+++ GF+++   NNTL +KVL+ G  F +
Sbjct:   29 DSDPLQDFCVG--DLKASASINGFPCKSA--VSASDFFYSGLGGPLDTSNPNGVTVAPANVLTFPGLNTLGISMNNVELAPGGVNPPHLHPRATEVGTVIEGSVFVGFLST---NNTLFSKVLNAGEAFVI 152          

HSP 2 Score: 55.8398 bits (133), Expect = 7.121e-35
Identity = 24/58 (41.38%), Postives = 34/58 (58.62%), Query Frame = 3
Query:  438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            G+ FV P GL+HF  N+G+  A   +  NSQ PG + +  T+FG+ P I    L +AF
Sbjct:  147 GEAFVIPRGLVHFQWNVGQVKARMITAFNSQLPGAVVLPSTLFGSKPEIPNAVLTRAF 204          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GLT2_ARATH (Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.208e-34
Identity = 62/131 (47.33%), Postives = 81/131 (61.83%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCFCV 454
            D   LQD CV   D K    +NG  CK     +A DFF SGL  P NT+   GV  + ANV   PGLNTLG+S   +++AP G +PPH HPRA+E  +V+EG+++ GF+T+   NNTL +KVL+ G  F V
Sbjct:   29 DSDPLQDFCVG--DLKASPSINGFPCKSS--VSASDFFFSGLGGPLNTSTPNGVAVSPANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSVFVGFLTT---NNTLFSKVLNAGEMFVV 152          

HSP 2 Score: 56.225 bits (134), Expect = 1.208e-34
Identity = 25/58 (43.10%), Postives = 34/58 (58.62%), Query Frame = 3
Query:  438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            G++FV P GL+HF  N+GK  A   +  NSQ PG   +  T+FG++P I    L K F
Sbjct:  147 GEMFVVPRGLVHFQWNVGKVKARLITSFNSQLPGSAVLPSTLFGSNPTIPNAVLTKTF 204          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: OXO1_HORVU (Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.306e-33
Identity = 61/131 (46.56%), Postives = 78/131 (59.54%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCFCV 454
            DP  LQD CVA  D K  V VNG  CK    A  +  F S L K GNT+   G   TE +V + PG NTLGVS  R+D+AP G +PPHIHPRA+EI +V++G L  G + S +  N L ++V+  G  F +
Sbjct:    2 DPDPLQDFCVADLDGK-AVSVNGHTCKPMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVI 131          

HSP 2 Score: 53.9138 bits (128), Expect = 1.306e-33
Identity = 26/57 (45.61%), Postives = 33/57 (57.89%), Query Frame = 3
Query:  438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKA 608
            G+ FV P GL+HF  N+GKT A      NSQ PG + +  T+FG+ P I    L KA
Sbjct:  126 GETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIVFVPLTLFGSDPPIPTPVLTKA 182          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GER2_WHEAT (Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.750e-33
Identity = 61/131 (46.56%), Postives = 78/131 (59.54%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCFCV 454
            DP  LQD CVA  D K  V VNG  CK    A  +  F S L K GNT+   G   TE +V + PG NTLGVS  R+D+AP G +PPHIHPRA+EI +V++G L  G + S +  N L ++V+  G  F +
Sbjct:   25 DPDPLQDFCVADLDGK-AVSVNGHTCKPMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLI 154          

HSP 2 Score: 53.1434 bits (126), Expect = 3.750e-33
Identity = 25/57 (43.86%), Postives = 34/57 (59.65%), Query Frame = 3
Query:  438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKA 608
            G+ F+ P GL+HF  N+GKT A      NSQ PG + +  T+FG++P I    L KA
Sbjct:  149 GETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKA 205          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: OXO2_HORVU (Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.285e-33
Identity = 60/131 (45.80%), Postives = 78/131 (59.54%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCFCV 454
            DP  LQD CVA  D K  V VNG  CK    A  +  F S L K GNT+   G   TE +V + PG NTLGVS  R+D+AP G +PPH+HPRA+EI +V++G L  G + S +  N L ++V+  G  F +
Sbjct:   25 DPDPLQDFCVADLDGK-AVSVNGHPCKPMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHVHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLI 154          

HSP 2 Score: 53.1434 bits (126), Expect = 8.285e-33
Identity = 25/57 (43.86%), Postives = 34/57 (59.65%), Query Frame = 3
Query:  438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKA 608
            G+ F+ P GL+HF  N+GKT A      NSQ PG + +  T+FG++P I    L KA
Sbjct:  149 GETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKA 205          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL38_ORYSJ (Germin-like protein 3-8 OS=Oryza sativa subsp. japonica GN=Os03g0804700 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.383e-32
Identity = 60/138 (43.48%), Postives = 77/138 (55.80%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVN-------GKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCFCV 454
            DP  +QD CVA+  P+ G           G  CK      ++DFF +GL    +T NR G N T AN E  PGLNTLGVS  R+D AP G +P H HPRA+E++ V+ G + AGFV++        +KVL EG  F V
Sbjct:   26 DPEPVQDFCVAVV-PRAGDAAAAACPAYPGFPCKPASTVVSDDFFFAGLAVASDTDNRFGFNVTAANAETFPGLNTLGVSIGRVDLAPGGVNPLHSHPRATELIHVVAGRVLAGFVST---AGEFYSKVLGEGETFVV 159          

HSP 2 Score: 56.6102 bits (135), Expect = 2.383e-32
Identity = 25/58 (43.10%), Postives = 34/58 (58.62%), Query Frame = 3
Query:  438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            G+ FV P G+IHF  N+G  +A   +  NSQ PG +    T+FG+ P I    LAK+F
Sbjct:  154 GETFVVPRGMIHFQYNVGGVAAQVITAFNSQMPGVVAAGSTLFGSDPEIPDAVLAKSF 211          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GER3_WHEAT (Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.042e-32
Identity = 60/131 (45.80%), Postives = 78/131 (59.54%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCFCV 454
            +P  LQD CVA  D K  V VNG  CK    A  +  F S L K GNT+   G   T+ NV + PG NTLGVS  R+D+AP G +PPHIHPRA+EI +V++G L  G + S +  N L ++V+  G  F +
Sbjct:   25 NPHPLQDFCVADLDGK-AVSVNGHMCKPMSEAGDDFLFSSKLAKAGNTSTPNGSAVTDLNVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLI 154          

HSP 2 Score: 50.447 bits (119), Expect = 4.042e-32
Identity = 24/57 (42.11%), Postives = 33/57 (57.89%), Query Frame = 3
Query:  438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKA 608
            G+ F+ P GL+HF  N+GKT A      NSQ P  + +  T+FG++P I    L KA
Sbjct:  149 GETFLIPRGLMHFQFNVGKTEASMVVFFNSQSPSVVFVPLTLFGSNPPIPKPVLTKA 205          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL11_ARATH (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 5.674e-31
Identity = 56/131 (42.75%), Postives = 78/131 (59.54%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPK-DGVFVNGKFCKDPKLATAEDFFLSGLNKPGNT-TNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448
            DP  LQD CV+        +F+NGK CKDP  A+  DF  S L++PGNT T    +N T      +PGLNT+G++  R+D+  +G  PPH+HPRASE+ + L+G L  GFV   + +  + T+ LH G  F
Sbjct:   19 DPDPLQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALSRPGNTKTKPFMINVTVTTTANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVLLVGFV---DTSGRVFTQELHPGETF 146          

HSP 2 Score: 44.2838 bits (103), Expect = 5.674e-31
Identity = 26/59 (44.07%), Postives = 36/59 (61.02%), Query Frame = 3
Query:  438 GDVFVFPIGLIHFHVNIGK-TSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            G+ FVFP GLIHF  NI   +SA+A SGL+SQ PG   ++ + F + P    + L  A+
Sbjct:  143 GETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLSSFISKPPFLVEVLKSAY 201          
The following BLAST results are available for this feature:
BLAST of CF510025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL21_ARATH1.963e-3855.04Germin-like protein subfamily 2 member 1 OS=Arabid... [more]
GL14_ORYSJ1.348e-3651.85Germin-like protein 1-4 OS=Oryza sativa subsp. jap... [more]
GLT1_ARATH7.121e-3545.80Germin-like protein subfamily T member 1 OS=Arabid... [more]
GLT2_ARATH1.208e-3447.33Germin-like protein subfamily T member 2 OS=Arabid... [more]
OXO1_HORVU1.306e-3346.56Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1[more]
GER2_WHEAT3.750e-3346.56Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 S... [more]
OXO2_HORVU8.285e-3345.80Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1[more]
GL38_ORYSJ2.383e-3243.48Germin-like protein 3-8 OS=Oryza sativa subsp. jap... [more]
GER3_WHEAT4.042e-3245.80Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 S... [more]
GL11_ARATH5.674e-3142.75Germin-like protein subfamily 1 member 1 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-540 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_C01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510025 ID=CF510025; Name=CF510025; organism=Citrus sinensis; type=EST; length=613bp
AATTCAATTTCTTCTAGGTTTTGCTCTCTTGGCTTTGGCTTCTTCTTTGG
CCTCTGCCTATGACCCTAGCCGTCTTCAAGATATCTGTGTAGCCATCGAG
GACCCGAAGGATGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAA
GCTTGCGACAGCTGAAGATTTCTTCTTGTCAGGGCTAAACAAGCCTGGAA
ACACAACAAATCGACTTGGTGTTAATGAAACAGAAGCAAATGTTGAGCAA
ATTCCAGGACTCAACACCCTTGGCGTATCAGCATTCCGTATTGACTATGC
GCCGAATGGGCAAAGCCCGCCTCACATTCACCCCCGTGCCAGTGAAATCC
TGCTGGTCCTGGAAGGAACTCTTTATGCTGGTTTTGTGACATCAGACAAC
CTAAATAACACACTCATCACAAAAGTTCTGCATGAGGGGAGATGTTTTTG
TGTTTCCAATTGGTTTGATTCACTTCCACGTCAACATTGGAAAAACAAGT
GCAGTTGCCTATTCTGGTCTAAACAGCCAGTTCCCCGGTGAAATTACCAT
AGCCGACACGATCTTTGGAGCCCATCCTCGAATCAAACCCGATTTTCTTG
CCAAGGCATTCCA
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