CF510025

Overview
NameCF510025
Unique NameCF510025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL33_ORYSJ (Germin-like protein 3-3 OS=Oryza sativa subsp. japonica GN=Os03g0693700 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.123e-30
Identity = 57/132 (43.18%), Postives = 75/132 (56.82%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTT-NRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCFCV 454
            DP  LQD CVA  D +  V +NG  CK    A  E  F S L   G+   N  G N T+ +V   PG+NTLGVS  RID+AP G +PPH+HPRA+E+ +VL G L  G + S +  N   ++V+  G  F +
Sbjct:   28 DPDPLQDFCVADLDSE--VTLNGYPCKPTPAAGDEFLFSSRLATGGDVNANPNGSNVTQLDVAGWPGVNTLGVSMNRIDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGSLDTGNRYYSRVVRGGETFVI 157          

HSP 2 Score: 55.0694 bits (131), Expect = 2.123e-30
Identity = 26/57 (45.61%), Postives = 34/57 (59.65%), Query Frame = 3
Query:  438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKA 608
            G+ FV P GL+HF  N+GKT A      NSQ PG + +  T+FG++P I    L KA
Sbjct:  152 GETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKA 208          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.346e-29
Identity = 52/135 (38.52%), Postives = 75/135 (55.56%), Query Frame = 2
Query:   62 DPSRLQDICVAIEDPKDGVFVNGKF----CKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCFCV 454
            DP  +QD CVA+  P+ G   +  +    CK      ++DFF +GL   G+T N  G +    NVE  P LNTLGV+  R+D AP G +P H HPRA+E++ V+ G +  GFV++        +KV+ EG  F +
Sbjct:   36 DPEPIQDFCVAV--PRAGGEASPAYPGFPCKPASAVVSDDFFFAGLAAAGSTDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRAAELVHVITGRMLVGFVST---AGKYYSKVVGEGETFAI 165          

HSP 2 Score: 54.6842 bits (130), Expect = 1.346e-29
Identity = 27/58 (46.55%), Postives = 33/58 (56.90%), Query Frame = 3
Query:  438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            G+ F  P GL+HF  N G  SA A +  NSQ PG +  A  +FGA P I    LAK+F
Sbjct:  160 GETFAIPRGLMHFQYNPGNASARAMTVFNSQLPGVVPAATALFGADPEIPDAVLAKSF 217          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL22_ARATH (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.180e-28
Identity = 69/151 (45.70%), Postives = 88/151 (58.28%), Query Frame = 2
Query:   59 YDPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCFCVSNWFDSLPRQHWKNKCSCL 511
            YDP  LQD+CVA  D   G  +NG  CK+    T  DFF +G++KP    + +G   T ANVE+IPGLNTL VS  RIDYAP G +PPH HPRA+E++ VLEG L  GF+T+    N L TK +  G  F          + + K+  S L
Sbjct:   23 YDPDALQDLCVA--DKSHGTKLNGFPCKETLNITESDFFFAGISKPAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFITT---ANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVL 168          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: AB19B_PRUPE (Auxin-binding protein ABP19b OS=Prunus persica GN=ABP19B PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.067e-28
Identity = 58/122 (47.54%), Postives = 68/122 (55.74%), Query Frame = 2
Query:   74 LQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEG 439
            +QD CVA     DG    G  CK P + T  DF  SGL   GNTTN      T A   Q PG+N LG+S  R+D  P G  P H HP ASE+LLV++GT+ AGFV SD   NT   K L +G
Sbjct:   20 VQDFCVADYKAPDGPA--GYSCKKPAIVTVNDFVYSGLGIAGNTTNIFKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVVPFHTHPGASEVLLVVQGTIIAGFVASD---NTPYLKTLKKG 136          

HSP 2 Score: 43.5134 bits (101), Expect = 7.067e-28
Identity = 19/39 (48.72%), Postives = 25/39 (64.10%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPG 539
            K   +GD+ VFP GL+HF VN G T A+A+   +S  PG
Sbjct:  131 KTLKKGDIIVFPQGLLHFQVNGGDTPAIAFPSFSSPSPG 169          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL32_ARATH (Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.183e-28
Identity = 53/129 (41.09%), Postives = 68/129 (52.71%), Query Frame = 2
Query:   62 DPSRLQDICVA--IEDP-KDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEG 439
            DP  +QD C+   +  P  D  F     CK+    T EDF  SGL   GN T   G        E  PGLNTLG+S  R D  P   +PPH HPRA+E+  +++G +Y+GFV S   NN +  KV+ EG
Sbjct:   26 DPDPIQDFCIPKPVTSPYHDHHFSTNLPCKNSSEVTTEDFVFSGLKTAGNFTET-GFATVPVGPENFPGLNTLGISFVRADLKPGSINPPHYHPRATEVAHLVKGRVYSGFVDS---NNKVYAKVMEEG 150          

HSP 2 Score: 51.2174 bits (121), Expect = 9.183e-28
Identity = 26/63 (41.27%), Postives = 36/63 (57.14%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            K    G++ V+P GL+HF +N+G  +A    GLNSQ PG   I   +FG+   I  + L KAF
Sbjct:  145 KVMEEGEMMVYPKGLVHFQMNVGDVTATIVGGLNSQNPGIQKIPSVVFGS--GINEELLMKAF 205          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.440e-27
Identity = 58/122 (47.54%), Postives = 68/122 (55.74%), Query Frame = 2
Query:   74 LQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEG 439
            +QD CVA     DG    G  CK P   T  DF  SGL   GNTTN +    T A   Q PG+N LG+S  R+D  P G  P H HP ASE+LLV++GT+ AGFV SD   NT   K L +G
Sbjct:   20 VQDFCVADYKAPDGPA--GYSCKKPAKVTINDFVYSGLGIAGNTTNIIKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVIPFHTHPGASEVLLVVQGTIIAGFVASD---NTPYLKTLKKG 136          

HSP 2 Score: 42.3578 bits (98), Expect = 3.440e-27
Identity = 19/39 (48.72%), Postives = 25/39 (64.10%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPG 539
            K   +GD+ VFP GL+HF VN G T A+A+   +S  PG
Sbjct:  131 KTLKKGDIMVFPQGLLHFQVNGGGTPALAFPSFSSPSPG 169          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GLT3_ARATH (Germin-like protein subfamily T member 3 OS=Arabidopsis thaliana GN=At1g74820 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.284e-26
Identity = 54/126 (42.86%), Postives = 74/126 (58.73%), Query Frame = 2
Query:   77 QDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCFCV 454
            QD CVA  D +     +G  CK     T+EDFF SGLN P NT+N  G+    AN+   PGLNTLG+S + +  AP G + PH HP  +E  +V+EG++  GF+T+   N TL +KV+  G  F +
Sbjct:   41 QDFCVA--DLQATPTNSGYPCKSQ--VTSEDFFYSGLNTPLNTSNPKGIAANPANLLTFPGLNTLGISMYNVAIAPGGYNQPHSHPGVTEAGVVIEGSVLVGFLTT---NYTLYSKVIGPGDMFVI 159          

HSP 2 Score: 45.8246 bits (107), Expect = 1.284e-26
Identity = 21/58 (36.21%), Postives = 30/58 (51.72%), Query Frame = 3
Query:  438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            GD+FV P GLIH+  N+GKT     + +    P E+ +  T+    P I  + L  AF
Sbjct:  154 GDMFVIPPGLIHYEGNVGKTQCRLLTVVADDLPSEVGVPHTLLATKPAIPNEVLISAF 211          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL51_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0197200 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.346e-26
Identity = 68/139 (48.92%), Postives = 81/139 (58.27%), Query Frame = 2
Query:   59 YDPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPG-------NTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCFCV 454
            +DP+ LQD CVA  DP   V VNG  CKDP   TA+DFF SG+ +P          + R G     A    IPGLNTLG SA R+D AP G  PPH HPRASE  +VL G +Y GFVTS   ++ ++ KVL  G  F V
Sbjct:   29 FDPNPLQDFCVA--DPTSKVRVNGLPCKDPAAVTADDFFFSGVGEPAAGGGRGATASRRYGFT---ARSVDIPGLNTLGASAARVDVAPGGVFPPHYHPRASETAVVLAGAVYFGFVTS-YPDSRVVAKVLRRGDVFAV 161          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL24_ORYSJ (Germin-like protein 2-4 OS=Oryza sativa subsp. japonica GN=Os02g0532500 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.058e-25
Identity = 53/130 (40.77%), Postives = 65/130 (50.00%), Query Frame = 2
Query:   62 DPSRLQDICVAIED---PKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDY-APNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEG 439
            DP  +QD CV       P +   +    C+ P   TA DF  SG+   GN +   G         Q PGL+TLG+S  R D  A  G +PPH HPRA+E  LVL G +YAGFV S      L  KVL +G
Sbjct:   24 DPDAVQDFCVPDAGRGRPVELAMLPAYPCRSPANLTAGDFAFSGVRAAGNFSPETGFAGVSVTPAQFPGLHTLGMSFARADLSAAGGVNPPHYHPRATETALVLAGRVYAGFVDS---GGRLFAKVLEQG 150          

HSP 2 Score: 51.6026 bits (122), Expect = 1.058e-25
Identity = 25/63 (39.68%), Postives = 37/63 (58.73%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611
            K   +G+V VFP  ++HF +N+G T A  Y   NS+ PG + I  T+FG+   I+   L +AF
Sbjct:  145 KVLEQGEVMVFPRAMVHFQLNVGDTPATVYGAFNSENPGIVRIPATVFGS--GIREAVLERAF 205          
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GLP1_SINAL (Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.136e-24
Identity = 51/109 (46.79%), Postives = 64/109 (58.72%), Query Frame = 2
Query:   74 LQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDN 400
            +QD CVA  DPK     +G  CK+P   T  DF  SGL K GNT+N +    T A      GLN L VS  R+D A  G  P H HP ASE+L+V++GT+ AGF++S N
Sbjct:   22 VQDFCVA--DPKGPQNPSGYSCKNPDQVTENDFAFSGLGKAGNTSNVIKAAVTPAFAPAFAGLNGLDVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISSAN 128          

HSP 2 Score: 40.817 bits (94), Expect = 1.136e-24
Identity = 19/39 (48.72%), Postives = 23/39 (58.97%), Query Frame = 3
Query:  423 KFCMRGDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPG 539
            K   RGD  VFP GL+HF +N GK  A+A+    S  PG
Sbjct:  133 KTLSRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPG 171          
The following BLAST results are available for this feature:
BLAST of CF510025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL33_ORYSJ2.123e-3043.18Germin-like protein 3-3 OS=Oryza sativa subsp. jap... [more]
GL37_ORYSJ1.346e-2938.52Germin-like protein 3-7 OS=Oryza sativa subsp. jap... [more]
GL22_ARATH1.180e-2845.70Germin-like protein subfamily 2 member 2 OS=Arabid... [more]
AB19B_PRUPE7.067e-2847.54Auxin-binding protein ABP19b OS=Prunus persica GN=... [more]
GL32_ARATH9.183e-2841.09Germin-like protein subfamily 3 member 2 OS=Arabid... [more]
AB19A_PRUPE3.440e-2747.54Auxin-binding protein ABP19a OS=Prunus persica GN=... [more]
GLT3_ARATH1.284e-2642.86Germin-like protein subfamily T member 3 OS=Arabid... [more]
GL51_ORYSJ9.346e-2648.92Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GL24_ORYSJ1.058e-2540.77Germin-like protein 2-4 OS=Oryza sativa subsp. jap... [more]
GLP1_SINAL1.136e-2446.79Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-540 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_C01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510025 ID=CF510025; Name=CF510025; organism=Citrus sinensis; type=EST; length=613bp
AATTCAATTTCTTCTAGGTTTTGCTCTCTTGGCTTTGGCTTCTTCTTTGG
CCTCTGCCTATGACCCTAGCCGTCTTCAAGATATCTGTGTAGCCATCGAG
GACCCGAAGGATGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAA
GCTTGCGACAGCTGAAGATTTCTTCTTGTCAGGGCTAAACAAGCCTGGAA
ACACAACAAATCGACTTGGTGTTAATGAAACAGAAGCAAATGTTGAGCAA
ATTCCAGGACTCAACACCCTTGGCGTATCAGCATTCCGTATTGACTATGC
GCCGAATGGGCAAAGCCCGCCTCACATTCACCCCCGTGCCAGTGAAATCC
TGCTGGTCCTGGAAGGAACTCTTTATGCTGGTTTTGTGACATCAGACAAC
CTAAATAACACACTCATCACAAAAGTTCTGCATGAGGGGAGATGTTTTTG
TGTTTCCAATTGGTTTGATTCACTTCCACGTCAACATTGGAAAAACAAGT
GCAGTTGCCTATTCTGGTCTAAACAGCCAGTTCCCCGGTGAAATTACCAT
AGCCGACACGATCTTTGGAGCCCATCCTCGAATCAAACCCGATTTTCTTG
CCAAGGCATTCCA
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