CF510025
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL31_ARATH (Germin-like protein subfamily 3 member 1 OS=Arabidopsis thaliana GN=GLP1 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.479e-24 Identity = 53/109 (48.62%), Postives = 62/109 (56.88%), Query Frame = 2 Query: 74 LQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDN 400 +QD CVA + K G C P A DF SGL PGNTTN + T A Q PGLN LG+S R+D AP G P H HP ASE+L VL G++ AGFV+S N Sbjct: 19 VQDFCVA--NLKRAETPAGYPCIRPIHVKATDFVFSGLGTPGNTTNIINAAVTPAFAAQFPGLNGLGLSTARLDLAPKGVIPMHTHPGASEVLFVLTGSITAGFVSSAN 125 HSP 2 Score: 40.817 bits (94), Expect = 1.479e-24 Identity = 19/34 (55.88%), Postives = 22/34 (64.71%), Query Frame = 3 Query: 438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPG 539 G V VFP GL+HF +N GK+SA A NS PG Sbjct: 135 GQVMVFPQGLLHFQINAGKSSASAVVTFNSANPG 168
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: ABP20_PRUPE (Auxin-binding protein ABP20 OS=Prunus persica GN=ABP20 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.923e-24 Identity = 51/109 (46.79%), Postives = 62/109 (56.88%), Query Frame = 2 Query: 74 LQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDN 400 +QD CVA +G G CK P DF SGL GNT+N + T A V Q PG+N LG+S R+D A G P H HP ASE+L+V +GT+ AGFV SDN Sbjct: 25 VQDFCVADLAAPEGPA--GFSCKKPASVKVNDFVFSGLGIAGNTSNIIKAAVTPAFVAQFPGVNGLGISIARLDLAVGGVVPFHTHPGASEVLIVAQGTICAGFVASDN 131 HSP 2 Score: 41.5874 bits (96), Expect = 1.923e-24 Identity = 17/35 (48.57%), Postives = 24/35 (68.57%), Query Frame = 3 Query: 435 RGDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPG 539 +GD+ VFP GL+HF VN G+ A+A++ S PG Sbjct: 140 KGDIMVFPQGLLHFQVNGGEAPALAFASFGSASPG 174
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL31_ORYSJ (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179000 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 4.234e-24 Identity = 55/134 (41.04%), Postives = 70/134 (52.24%), Query Frame = 2 Query: 62 DPSRLQDICVA--IEDPKDGVF-VNGKFCKDPKLATAEDFFLSGLNKPGNTTNRL-GVNETEAN-VEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448 DP L D CVA G F +NG C DP LA A+ F S L++ N L G N T + +PG N G++ RID AP G +PPH HPRASE LVL G++ GF + + L T++L G F Sbjct: 23 DPDLLFDYCVADTAAATAAGAFHLNGLACIDPALARADHFATSALSRATNPAATLYGFNATLTSPAASLPGANAQGLAMARIDLAPGGMAPPHSHPRASEAALVLSGSVLVGFA---DTSYRLYTQLLRAGEAF 153 HSP 2 Score: 48.1358 bits (113), Expect = 4.234e-24 Identity = 25/59 (42.37%), Postives = 34/59 (57.63%), Query Frame = 3 Query: 438 GDVFVFPIGLIHFHVNIGKTS-AVAYSGLNSQFPGEITIADTIFGAHPRIKPDFLAKAF 611 G+ FVFP ++HF N+ + AV SGLNSQ PG + + F PR+ + L KAF Sbjct: 150 GEAFVFPRAMVHFLYNMDTAAPAVVLSGLNSQSPGAQLVPFSAFRTEPRLPDEVLKKAF 208
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL33_ARATH (Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana GN=GER3 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.240e-24 Identity = 49/109 (44.95%), Postives = 64/109 (58.72%), Query Frame = 2 Query: 74 LQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDN 400 +QD CVA DPK +G CK+P T DF +GL GNT+N + T A G+N LGVS R+D A G P H HP ASE+L+V++GT+ AGF++S N Sbjct: 22 VQDFCVA--DPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGNTSNIIKAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFISSAN 128 HSP 2 Score: 40.4318 bits (93), Expect = 4.240e-24 Identity = 18/35 (51.43%), Postives = 22/35 (62.86%), Query Frame = 3 Query: 435 RGDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPG 539 RGD VFP GL+HF +N GK A+A+ S PG Sbjct: 137 RGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPG 171
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL12_ORYSJ (Germin-like protein 1-2 OS=Oryza sativa subsp. japonica GN=Os01g0705100 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.406e-23 Identity = 60/131 (45.80%), Postives = 76/131 (58.02%), Query Frame = 2 Query: 62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCFCV 454 D LQDICVA D + V+G CK ++DFF + + +T+N GVN T A V PGLNTLG+S R D AP G +PPH HPRASE++LVL G + GF T+ N L +KV+ E F V Sbjct: 30 DSPPLQDICVA--DLRAATAVDGFPCKPTASVVSDDFFCDAIVQAPSTSNPFGVNSTRATVSAFPGLNTLGLSITRTDLAPGGLNPPHSHPRASELVLVLSGEVMVGFTTA---ANRLFSKVVREKELFVV 155
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GLP1_BRANA (Germin-like protein 1 OS=Brassica napus GN=GER1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.855e-22 Identity = 50/109 (45.87%), Postives = 61/109 (55.96%), Query Frame = 2 Query: 74 LQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDN 400 +QD CVA + K G C P A DF S L PGNTTN + T V Q P LN LG+S R+D AP G P H HP ASE+L VL+G++ AGF++S N Sbjct: 19 VQDFCVA--NLKRAETPAGYPCIRPIHVKASDFVFS-LGTPGNTTNIISAAVTPGFVAQFPALNGLGISTARLDLAPKGVIPMHTHPGASEVLFVLDGSITAGFISSAN 124 HSP 2 Score: 39.6614 bits (91), Expect = 4.855e-22 Identity = 18/34 (52.94%), Postives = 21/34 (61.76%), Query Frame = 3 Query: 438 GDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPG 539 G V VFP GL+HF +N GKT A A +S PG Sbjct: 134 GQVMVFPQGLLHFQINAGKTPAAALVTFSSASPG 167
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL813_ORYSJ (Germin-like protein 8-13 OS=Oryza sativa subsp. japonica GN=Os08g0459700 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.205e-22 Identity = 47/124 (37.90%), Postives = 64/124 (51.61%), Query Frame = 2 Query: 77 QDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCF 448 QD CVA P +G C+ TA DF+ L +PG + A V+Q P +N LG+SA R+D P G P H HP SE+L VL+G L AGF++S +N + K + +G F Sbjct: 29 QDFCVA-NLPLGADTPSGYQCRPAATVTAADFYSGALARPGILIRPFNTSLASAFVQQYPAVNGLGISASRVDILPGGVVPLHTHPAGSELLYVLDGALVAGFISSS--DNKVYYKEVSKGGMF 149 HSP 2 Score: 43.1282 bits (100), Expect = 8.205e-22 Identity = 26/63 (41.27%), Postives = 37/63 (58.73%), Query Frame = 3 Query: 435 RGDVFVFPIGLIHFHVNIGKTSAVAYSGLNSQFPGEITIADTIFGAHPR-----IKPDFLAKA 608 +G +FVFP GL+HF N G T+AVA++ +S PG + I D A+ +K FLA+A Sbjct: 145 KGGMFVFPQGLLHFQYNTGDTTAVAFAAYSSSNPG-LQILDYALFANNLPTSYVVKGTFLAEA 206
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL34_ORYSJ (Putative germin-like protein 3-4 OS=Oryza sativa subsp. japonica GN=Os03g0693800 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.064e-21 Identity = 57/132 (43.18%), Postives = 76/132 (57.58%), Query Frame = 2 Query: 62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTT-NRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCFCV 454 D LQD CVA D K V VNG CK A E F S + G+ N G N TE +V + PG+NTLGVS R+D+AP G +PPH+HPRA+E+ +VL G L G + + ++ N +KV+ G F + Sbjct: 30 DADPLQDFCVADLDSK--VTVNGHACKPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDMGNRYYSKVVRAGETFVI 159
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GL36_ORYSJ (Germin-like protein 3-6 OS=Oryza sativa subsp. japonica GN=Os03g0694000 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.053e-21 Identity = 57/132 (43.18%), Postives = 75/132 (56.82%), Query Frame = 2 Query: 62 DPSRLQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTT-NRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEGRCFCV 454 D LQD CVA D K V VNG CK A E F S + G+ N G N TE +V + PG+NTLGVS R+D+AP G +PPH+HPRA+E+ +VL G L G + + + N +KV+ G F + Sbjct: 30 DADPLQDFCVADLDSK--VTVNGHACKPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVI 159
BLAST of CF510025 vs. ExPASy Swiss-Prot
Match: GLP1_IPONI (Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.929e-20 Identity = 56/122 (45.90%), Postives = 69/122 (56.56%), Query Frame = 2 Query: 74 LQDICVAIEDPKDGVFVNGKFCKDPKLATAEDFFLSGLNKPGNTTNRLGVNETEANVEQIPGLNTLGVSAFRIDYAPNGQSPPHIHPRASEILLVLEGTLYAGFVTSDNLNNTLITKVLHEG 439 + D CVA P +G CK+ TA DF SGL KPGNTTN + T A V Q PG+ LGV+ R+D AP G P H HP ASEIL V+EGT+ A F++S N + K L+ G Sbjct: 24 VNDFCVA-NGPGARDTPSGFVCKNTAKVTAADFVYSGLAKPGNTTNIINAAVTPAFVGQFPGVIGLGVTLARLDLAPGGVIPMHTHPGASEILNVVEGTILAAFISS---GNKVYEKALYPG 141 HSP 2 Score: 25.0238 bits (53), Expect = 1.929e-20 Identity = 12/25 (48.00%), Postives = 14/25 (56.00%), Query Frame = 3 Query: 420 QKFCMRGDVFVFPIGLIHFHVNIGK 494 +K GDV VFP GL+ F GK Sbjct: 135 EKALYPGDVMVFPQGLLDFQEITGK 159 The following BLAST results are available for this feature:
BLAST of CF510025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >CF510025 ID=CF510025; Name=CF510025; organism=Citrus sinensis; type=EST; length=613bpback to top |