CF510055

Overview
NameCF510055
Unique NameCF510055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length450
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THIL_XENTR (Acetyl-CoA acetyltransferase, mitochondrial OS=Xenopus tropicalis GN=acat1 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 5.834e-34
Identity = 74/118 (62.71%), Postives = 91/118 (77.12%), Query Frame = 2
Query:   95 DVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN 448
            +V I   ARTP+G F G+LSSL ATKLGSIAI+AA++RA +    V+EV+ GNVL A  GQAP+RQA LGAG+  S   TT+NKVCASG+K+IMLA+QS+  G   V+VAGGMESMSN
Sbjct:   34 EVVIASAARTPIGSFQGSLSSLPATKLGSIAIKAAVERAGIPGDEVKEVYMGNVLQAGQGQAPSRQATLGAGLAISTPTTTINKVCASGMKSIMLAAQSLMCGHQQVMVAGGMESMSN 151          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THIL_DANRE (Acetyl-CoA acetyltransferase, mitochondrial OS=Danio rerio GN=acat1 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 9.952e-34
Identity = 73/117 (62.39%), Postives = 89/117 (76.07%), Query Frame = 2
Query:   95 DVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            +V IV   RTP+G F G+LS+L ATKLGSIAI+ A+ +A +    V+EV+ GNVL A  GQAP RQA LGAG+P S   TT+NKVCASG+K+IMLASQS+  G  DV+VAGGMESMS
Sbjct:   34 EVVIVSAVRTPIGSFKGSLSTLPATKLGSIAIKGAIDKAGIPVEEVKEVYMGNVLQAGEGQAPTRQALLGAGLPLSTPATTINKVCASGMKSIMLASQSLMCGHQDVMVAGGMESMS 150          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THIL1_DICDI (Probable acetyl-CoA acetyltransferase OS=Dictyostelium discoideum GN=DDB_G0271544 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.217e-31
Identity = 68/116 (58.62%), Postives = 84/116 (72.41%), Query Frame = 2
Query:   98 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            V IV   RTP+G   G+LS++  TKL SI IE A+KRA + PS V E   GNV+SANLGQAPARQ ALGAG+    + TT+NKVC+SG+KAI+  +QSI LG +  +VAGG ESMS
Sbjct:   26 VVIVSAVRTPIGSIGGSLSTIPGTKLSSITIEEAVKRAGIKPSDVDEAIIGNVISANLGQAPARQCALGAGLEQKTITTTINKVCSSGMKAIVFGAQSIALGHSKTVVAGGFESMS 141          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THIL_YEAST (Acetyl-CoA acetyltransferase OS=Saccharomyces cerevisiae GN=ERG10 PE=1 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 1.757e-30
Identity = 70/121 (57.85%), Postives = 92/121 (76.03%), Query Frame = 2
Query:   92 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRA-NVDPSL-VQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN 448
            ++V IV  ARTP+G F G+LSS +A +LG++A++ AL +   +D S    E+ FGNVLSANLGQAPARQ AL AG+ N +V +TVNKVCAS +KAI+L +QSI+ G  DV+VAGG ESM+N
Sbjct:    3 QNVYIVSTARTPIGSFQGSLSSKTAVELGAVALKGALAKVPELDASKDFDEIIFGNVLSANLGQAPARQVALAAGLSNHIVASTVNKVCASAMKAIILGAQSIKCGNADVVVAGGCESMTN 123          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THIA_CANTR (Acetyl-CoA acetyltransferase IA OS=Candida tropicalis GN=PACTA PE=1 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 1.757e-30
Identity = 65/118 (55.08%), Postives = 90/118 (76.27%), Query Frame = 2
Query:   98 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRA-NVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN 448
            V IV  ARTP+G F G+LSSL+ + LG+ A++AAL +   + P  V E+ FG VL AN+GQAPARQ AL AG+P+S+V +T+NKVCASG+KA+++ +Q+I  G +D++V GG ESMSN
Sbjct:    6 VYIVSTARTPIGSFQGSLSSLTYSDLGAHAVKAALAKVPQIKPQDVDEIVFGGVLQANVGQAPARQVALKAGLPDSIVASTINKVCASGMKAVIIGAQNIICGTSDIVVVGGAESMSN 123          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: ATOB_HAEIN (Acetyl-CoA acetyltransferase OS=Haemophilus influenzae GN=atoB PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.757e-30
Identity = 67/117 (57.26%), Postives = 84/117 (71.79%), Query Frame = 2
Query:   95 DVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            +V IV   RTP+G F G LSS+SA  LG+I I+ A+KRAN++ +LV EV  GNVL A LGQ PARQAAL AGI   +   T+NKVC SGLK++ L +QSI  G  D++V GGME+MS
Sbjct:    3 NVVIVSAVRTPIGSFNGALSSVSAVDLGAIVIQEAIKRANIESALVNEVIMGNVLQAGLGQNPARQAALKAGIEKEIPSLTINKVCGSGLKSVALGAQSIISGDADIVVVGGMENMS 119          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THIB_CANTR (Acetyl-CoA acetyltransferase IB OS=Candida tropicalis GN=PACTB PE=1 SV=3)

HSP 1 Score: 130.954 bits (328), Expect = 2.294e-30
Identity = 64/118 (54.24%), Postives = 90/118 (76.27%), Query Frame = 2
Query:   98 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRA-NVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN 448
            V IV  ARTP+G F G+LSSL+ + LG+ A++AAL +   + P  V E+ FG VL AN+GQAPARQ AL AG+P+S++ +T+NKVCASG+KA+++ +Q+I  G +D++V GG ESMSN
Sbjct:    6 VYIVSTARTPIGSFQGSLSSLTYSDLGAHAVKAALAKVPQIKPQDVDEIVFGGVLQANVGQAPARQVALKAGLPDSIIASTINKVCASGMKAVIIGAQNIICGTSDIVVVGGAESMSN 123          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THIL_SACBA (Acetyl-CoA acetyltransferase OS=Saccharomyces bayanus GN=ERG10 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 3.914e-30
Identity = 71/121 (58.68%), Postives = 91/121 (75.21%), Query Frame = 2
Query:   92 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRA-NVDPSL-VQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN 448
            ++V IV  ARTP+G F G+LSS +A +LG+ A++ AL +   +D S    E+ FGNVLSANLGQAPARQ AL AG+ N +V TTVNKVCAS +KAI+L +QSI+ G  DV+VAGG ESM+N
Sbjct:    3 QNVYIVSTARTPIGSFQGSLSSKTAVELGAAALKGALAKVPELDASKDFDEIIFGNVLSANLGQAPARQVALTAGLGNHIVATTVNKVCASAMKAIILGAQSIKCGNADVVVAGGCESMTN 123          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THIL_YARLI (Acetyl-CoA acetyltransferase OS=Yarrowia lipolytica GN=PAT1 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.487e-29
Identity = 66/115 (57.39%), Postives = 82/115 (71.30%), Query Frame = 2
Query:  104 IVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN 448
            IVG ARTP+G F G L S+SA  LG  A +AA++R+ V    + E  FG VL+AN GQAPARQ  +  G P SV  TT+NKVC+SGLK + LA+Q+I+ G  +VIVAGGMESMSN
Sbjct:   13 IVGAARTPVGKFNGALKSVSAIDLGITAAKAAVQRSKVPADQIDEFLFGQVLTANSGQAPARQVVIKGGFPESVEATTINKVCSSGLKTVALAAQAIKAGDRNVIVAGGMESMSN 127          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THIL_RALEH (Acetyl-CoA acetyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=phbA PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.784e-28
Identity = 63/117 (53.85%), Postives = 83/117 (70.94%), Query Frame = 2
Query:   95 DVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            DV IV  ART +G F G+L+ + A +LG++ I+AAL+RA V P  V EV  G VL+A  GQ PARQAA+ AG+P  V   T+NKVC SGLKA+MLA+ +I  G  +++VAGG E+MS
Sbjct:    3 DVVIVSAARTAVGKFGGSLAKIPAPELGAVVIKAALERAGVKPEQVSEVIMGQVLTAGSGQNPARQAAIKAGLPAMVPAMTINKVCGSGLKAVMLAANAIMAGDAEIVVAGGQENMS 119          
The following BLAST results are available for this feature:
BLAST of CF510055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
THIL_XENTR5.834e-3462.71Acetyl-CoA acetyltransferase, mitochondrial OS=Xen... [more]
THIL_DANRE9.952e-3462.39Acetyl-CoA acetyltransferase, mitochondrial OS=Dan... [more]
THIL1_DICDI1.217e-3158.62Probable acetyl-CoA acetyltransferase OS=Dictyoste... [more]
THIL_YEAST1.757e-3057.85Acetyl-CoA acetyltransferase OS=Saccharomyces cere... [more]
THIA_CANTR1.757e-3055.08Acetyl-CoA acetyltransferase IA OS=Candida tropica... [more]
ATOB_HAEIN1.757e-3057.26Acetyl-CoA acetyltransferase OS=Haemophilus influe... [more]
THIB_CANTR2.294e-3054.24Acetyl-CoA acetyltransferase IB OS=Candida tropica... [more]
THIL_SACBA3.914e-3058.68Acetyl-CoA acetyltransferase OS=Saccharomyces baya... [more]
THIL_YARLI1.487e-2957.39Acetyl-CoA acetyltransferase OS=Yarrowia lipolytic... [more]
THIL_RALEH4.784e-2853.85Acetyl-CoA acetyltransferase OS=Ralstonia eutropha... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-570 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510055 ID=CF510055; Name=CF510055; organism=Citrus sinensis; type=EST; length=450bp
CCTCACGTGATCCACACTCACTCTGAATCTCGCAGATCGTGATTGGCATT
GACAAATGGCTCCAGCGGCAGCATCTGATTCGATAAAGCCTAGAGATGTT
TGTATTGTCGGGGTTGCTCGTACACCAATGGGTGGATTTCTTGGTACTCT
ATCTTCCTTATCTGCTACCAAGCTTGGATCTATCGCTATTGAAGCTGCTC
TTAAGAGAGCAAATGTTGATCCATCACTTGTACAAGAAGTTTTCTTTGGT
AATGTTCTCAGTGCAAATCTAGGACAGGCTCCTGCTAGACAGGCTGCATT
GGGTGCAGGAATTCCGAATTCAGTGGTCTGTACTACTGTTAACAAAGTTT
GTGCATCAGGGCTGAAAGCTATAATGCTTGCATCACAGAGTATCCAGTTG
GGGATCAATGATGTCATTGTGGCTGGAGGAATGGAAAGCATGTCTAACGC
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