CF510055

Overview
NameCF510055
Unique NameCF510055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length450
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: YQEF_ECOLI (Probable acetyl-CoA acetyltransferase OS=Escherichia coli (strain K12) GN=yqeF PE=3 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 6.248e-28
Identity = 61/118 (51.69%), Postives = 82/118 (69.49%), Query Frame = 2
Query:   92 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            +DV IVG  RTP+G F G L+  SA +LGS+ ++A ++R  V    V EV  G VL+A  GQ PARQ+A+  G+PNSV   T+N VC SGLKA+ LA+Q+IQ G  D+++AGG E+MS
Sbjct:    2 KDVVIVGALRTPIGCFRGALAGHSAVELGSLVVKALIERTGVPAYAVDEVILGQVLTAGAGQNPARQSAIKGGLPNSVSAITINDVCGSGLKALHLATQAIQCGEADIVIAGGQENMS 119          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THIL_MYCLE (Probable acetyl-CoA acetyltransferase OS=Mycobacterium leprae GN=fadA4 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 3.101e-27
Identity = 66/114 (57.89%), Postives = 80/114 (70.18%), Query Frame = 2
Query:  104 IVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            IV  ARTP+G  +G+L   SA+ LG+I I AALK+ANV PS+VQ V  G VL+A  GQ PARQAA+ AGI   V   T+NK+C SGL AI LA Q I+ G  DV+VAGG ESM+
Sbjct:    6 IVTGARTPIGKLMGSLKDFSASDLGAITIAAALKKANVAPSIVQYVIIGQVLTAGAGQMPARQAAVAAGIGWDVPALTINKMCLSGLDAIALADQLIRAGEFDVVVAGGQESMT 119          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: ATOB_ECOLI (Acetyl-CoA acetyltransferase OS=Escherichia coli (strain K12) GN=atoB PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.625e-26
Identity = 63/118 (53.39%), Postives = 81/118 (68.64%), Query Frame = 2
Query:   92 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            ++  IV   RT +G F G+L+S SA  LG+  I+AA++RA +D   V EV  GNVL A LGQ PARQA L +G+  +V   TVNKVC SGLK++ LA+Q+IQ G    IVAGGME+MS
Sbjct:    2 KNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKIDSQHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMS 119          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THIL_CHRVI (Acetyl-CoA acetyltransferase OS=Chromatium vinosum GN=phbA PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 4.478e-26
Identity = 58/117 (49.57%), Postives = 80/117 (68.38%), Query Frame = 2
Query:   95 DVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            ++ IV   R+ +G F G+LSSLSAT++G+  ++  L R  + P  + EV  G VL+A +GQ PARQ  L AG+P+SV   T+NKVC SGLKA+ LA Q+I  G  D+++AGG ESMS
Sbjct:    4 NIVIVDAGRSAIGTFGGSLSSLSATEIGTAVLKGLLARTGLAPEQIDEVILGQVLTAGVGQNPARQTTLHAGLPHSVPAMTINKVCGSGLKAVHLAMQAIACGDADIVIAGGQESMS 120          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THIC_RAT (Acetyl-CoA acetyltransferase, cytosolic OS=Rattus norvegicus GN=Acat2 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.303e-25
Identity = 59/116 (50.86%), Postives = 79/116 (68.10%), Query Frame = 2
Query:   98 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            V I+  ART +G F G LS++    LG+  I+  L+RA V P  V EV FG+VL+A  GQ P RQA++GAGIP SV   +   +C SGLKA+ LA+QSI +G + ++VAGGME+MS
Sbjct:    8 VVIISAARTAIGSFNGALSTVPVHNLGTTVIKEVLQRAKVAPEEVSEVIFGHVLTAGCGQNPTRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAAQSIAMGDSTIVVAGGMENMS 123          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THIC_MOUSE (Acetyl-CoA acetyltransferase, cytosolic OS=Mus musculus GN=Acat2 PE=1 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 1.303e-25
Identity = 59/116 (50.86%), Postives = 80/116 (68.97%), Query Frame = 2
Query:   98 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            V IV  ART +G F G LS++   ++G+  I+  L+RA V P  V EV FG+VL+A  GQ P RQA++GAGIP SV   +   +C SGLKA+ LA+QSI +G + ++VAGGME+MS
Sbjct:    8 VVIVSAARTAIGSFNGALSTVPVHEMGTTVIKEVLQRAKVAPEEVSEVIFGHVLTAGCGQNPTRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAAQSIAMGDSTIVVAGGMENMS 123          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THIC_HUMAN (Acetyl-CoA acetyltransferase, cytosolic OS=Homo sapiens GN=ACAT2 PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 1.702e-25
Identity = 61/116 (52.59%), Postives = 78/116 (67.24%), Query Frame = 2
Query:   98 VCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            V IV  ART +G F G L+++    LGS  I+  LKRA V P  V EV FG+VL+A  GQ P RQA++GAGIP SV   +   +C SGLKA+ LA QSI +G + ++VAGGME+MS
Sbjct:    8 VVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMS 123          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THIL_MYCTU (Probable acetyl-CoA acetyltransferase OS=Mycobacterium tuberculosis GN=fadA4 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.222e-25
Identity = 62/114 (54.39%), Postives = 80/114 (70.18%), Query Frame = 2
Query:  104 IVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            IV  ARTP+G  +G+L   SA++LG+IAI+ AL++ANV  SLV+ V  G VL+A  GQ PARQAA+ AGI   V   T+NK+C SG+ AI LA Q I+    DV+VAGG ESM+
Sbjct:    2 IVAGARTPIGKLMGSLKDFSASELGAIAIKGALEKANVPASLVEYVIMGQVLTAGAGQMPARQAAVAAGIGWDVPALTINKMCLSGIDAIALADQLIRAREFDVVVAGGQESMT 115          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THIL_MYCBO (Probable acetyl-CoA acetyltransferase OS=Mycobacterium bovis GN=fadA4 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.222e-25
Identity = 62/114 (54.39%), Postives = 80/114 (70.18%), Query Frame = 2
Query:  104 IVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            IV  ARTP+G  +G+L   SA++LG+IAI+ AL++ANV  SLV+ V  G VL+A  GQ PARQAA+ AGI   V   T+NK+C SG+ AI LA Q I+    DV+VAGG ESM+
Sbjct:    2 IVAGARTPIGKLMGSLKDFSASELGAIAIKGALEKANVPASLVEYVIMGQVLTAGAGQMPARQAAVAAGIGWDVPALTINKMCLSGIDAIALADQLIRAREFDVVVAGGQESMT 115          
BLAST of CF510055 vs. ExPASy Swiss-Prot
Match: THLA_CLOAB (Acetyl-CoA acetyltransferase OS=Clostridium acetobutylicum GN=thlA PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 6.466e-25
Identity = 57/118 (48.31%), Postives = 78/118 (66.10%), Query Frame = 2
Query:   92 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMS 445
            ++V I    RT +G +  +L  + A  LG+ AI+ A+K+A + P  V EV  GNVL A LGQ PARQA+  AG+P  +   T+NKVC SGL+ + LA+Q I+ G  DVI+AGGME+MS
Sbjct:    2 KEVVIASAVRTAIGSYGKSLKDVPAVDLGATAIKEAVKKAGIKPEDVNEVILGNVLQAGLGQNPARQASFKAGLPVEIPAMTINKVCGSGLRTVSLAAQIIKAGDADVIIAGGMENMS 119          
The following BLAST results are available for this feature:
BLAST of CF510055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
YQEF_ECOLI6.248e-2851.69Probable acetyl-CoA acetyltransferase OS=Escherich... [more]
THIL_MYCLE3.101e-2757.89Probable acetyl-CoA acetyltransferase OS=Mycobacte... [more]
ATOB_ECOLI2.625e-2653.39Acetyl-CoA acetyltransferase OS=Escherichia coli (... [more]
THIL_CHRVI4.478e-2649.57Acetyl-CoA acetyltransferase OS=Chromatium vinosum... [more]
THIC_RAT1.303e-2550.86Acetyl-CoA acetyltransferase, cytosolic OS=Rattus ... [more]
THIC_MOUSE1.303e-2550.86Acetyl-CoA acetyltransferase, cytosolic OS=Mus mus... [more]
THIC_HUMAN1.702e-2552.59Acetyl-CoA acetyltransferase, cytosolic OS=Homo sa... [more]
THIL_MYCTU2.222e-2554.39Probable acetyl-CoA acetyltransferase OS=Mycobacte... [more]
THIL_MYCBO2.222e-2554.39Probable acetyl-CoA acetyltransferase OS=Mycobacte... [more]
THLA_CLOAB6.466e-2548.31Acetyl-CoA acetyltransferase OS=Clostridium acetob... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-570 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510055 ID=CF510055; Name=CF510055; organism=Citrus sinensis; type=EST; length=450bp
CCTCACGTGATCCACACTCACTCTGAATCTCGCAGATCGTGATTGGCATT
GACAAATGGCTCCAGCGGCAGCATCTGATTCGATAAAGCCTAGAGATGTT
TGTATTGTCGGGGTTGCTCGTACACCAATGGGTGGATTTCTTGGTACTCT
ATCTTCCTTATCTGCTACCAAGCTTGGATCTATCGCTATTGAAGCTGCTC
TTAAGAGAGCAAATGTTGATCCATCACTTGTACAAGAAGTTTTCTTTGGT
AATGTTCTCAGTGCAAATCTAGGACAGGCTCCTGCTAGACAGGCTGCATT
GGGTGCAGGAATTCCGAATTCAGTGGTCTGTACTACTGTTAACAAAGTTT
GTGCATCAGGGCTGAAAGCTATAATGCTTGCATCACAGAGTATCCAGTTG
GGGATCAATGATGTCATTGTGGCTGGAGGAATGGAAAGCATGTCTAACGC
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